Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20775

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
4,551,708	+		AO353_20765	0.66	-0.7
4,551,708	+		AO353_20765	0.66	-0.2
4,551,708	+		AO353_20765	0.66	+0.1
4,551,709	-		AO353_20765	0.66	-0.7
4,551,709	-		AO353_20765	0.66	+0.5
4,551,709	-		AO353_20765	0.66	+1.5
4,551,733	+		AO353_20765	0.71	-1.4
4,551,733	+		AO353_20765	0.71	-0.4
4,551,772	+		AO353_20765	0.78	+0.0
4,551,951	+				-0.2
4,551,951	+				+0.1
4,551,951	+				+0.5
4,551,952	-				-1.3
4,551,952	-				-2.2
4,551,952	-				-1.2
4,552,020	+				-0.4
4,552,020	+				+2.3
4,552,021	-				+1.8
4,552,021	-				+1.3
4,552,021	-				-1.7
4,552,021	-				+0.6
4,552,021	-				-0.0
4,552,029	+				+1.8
4,552,030	-				+0.1
4,552,051	+				+0.0
4,552,052	-				-1.2
4,552,052	-				+0.3
4,552,078	+		AO353_20770	0.13	+1.1
4,552,078	+		AO353_20770	0.13	+0.6
4,552,078	+		AO353_20770	0.13	+0.3
4,552,079	-		AO353_20770	0.13	+1.4
4,552,079	-		AO353_20770	0.13	+0.5
4,552,079	-		AO353_20770	0.13	+0.3
4,552,079	-		AO353_20770	0.13	+1.8
4,552,109	+		AO353_20770	0.28	+0.1
4,552,110	-		AO353_20770	0.29	-0.7
4,552,110	-		AO353_20770	0.29	+1.4
4,552,197	+		AO353_20770	0.72	+2.1
4,552,197	+		AO353_20770	0.72	-0.4
4,552,197	+		AO353_20770	0.72	-0.7
4,552,198	-		AO353_20770	0.73	-0.6
4,552,198	-		AO353_20770	0.73	+0.5
4,552,198	-		AO353_20770	0.73	-1.5
4,552,250	+				+0.8
4,552,250	+				+0.3
4,552,251	-				+0.3
4,552,430	+				-0.5
4,552,464	-				-1.2
4,552,465	+				-2.5
4,552,465	+				-0.2
4,552,465	+				+0.1
4,552,466	-				-0.1
4,552,466	-				-0.2
4,552,596	+		AO353_20775	0.13	-0.3
4,552,596	+		AO353_20775	0.13	-1.5
4,552,596	+		AO353_20775	0.13	-1.4
4,552,596	+		AO353_20775	0.13	+0.3
4,552,596	+		AO353_20775	0.13	-2.2
4,552,596	+		AO353_20775	0.13	+1.7
4,552,597	-		AO353_20775	0.13	-0.2
4,552,597	-		AO353_20775	0.13	-1.7
4,552,597	-		AO353_20775	0.13	+0.4
4,552,597	-		AO353_20775	0.13	-0.7
4,552,597	-		AO353_20775	0.13	+0.5
4,552,597	-		AO353_20775	0.13	+0.0
4,552,597	-		AO353_20775	0.13	+1.4
4,552,641	+		AO353_20775	0.20	-1.5
4,552,669	+		AO353_20775	0.24	+0.8
4,552,669	+		AO353_20775	0.24	+1.1
4,552,669	+		AO353_20775	0.24	-1.3
4,552,670	-		AO353_20775	0.24	+0.4
4,552,670	-		AO353_20775	0.24	+0.7
4,552,670	-		AO353_20775	0.24	-1.5
4,552,818	+		AO353_20775	0.45	-0.9
4,552,818	+		AO353_20775	0.45	+0.8
4,552,821	+		AO353_20775	0.45	+1.2
4,552,821	+		AO353_20775	0.45	-0.4
4,552,821	+		AO353_20775	0.45	+0.3
4,552,821	+		AO353_20775	0.45	+1.3
4,552,821	+		AO353_20775	0.45	+0.5
4,552,821	+		AO353_20775	0.45	-2.0
4,552,821	+		AO353_20775	0.45	+1.8
4,552,821	+		AO353_20775	0.45	-0.4
4,552,822	-		AO353_20775	0.45	-2.6
4,552,822	-		AO353_20775	0.45	-1.2
4,552,822	-		AO353_20775	0.45	-1.3
4,552,822	-		AO353_20775	0.45	-0.2
4,552,822	-		AO353_20775	0.45	-0.3
4,552,822	-		AO353_20775	0.45	-1.7
4,552,890	+		AO353_20775	0.55	+0.8
4,552,890	+		AO353_20775	0.55	+0.4
4,552,890	+		AO353_20775	0.55	-1.2
4,552,911	+		AO353_20775	0.58	+0.1
4,552,911	+		AO353_20775	0.58	-0.3
4,552,911	+		AO353_20775	0.58	+1.3
4,552,911	+		AO353_20775	0.58	-0.4
4,552,911	+		AO353_20775	0.58	-0.2
4,552,912	-		AO353_20775	0.58	-0.2
4,552,912	-		AO353_20775	0.58	+0.3
4,552,912	-		AO353_20775	0.58	-0.2
4,552,929	+		AO353_20775	0.61	+0.4
4,552,929	+		AO353_20775	0.61	-0.5
4,552,929	+		AO353_20775	0.61	+0.3
4,552,929	+		AO353_20775	0.61	+0.1
4,552,930	-		AO353_20775	0.61	-1.2
4,552,930	-		AO353_20775	0.61	-1.0
4,552,930	-		AO353_20775	0.61	+0.4
4,553,043	+		AO353_20775	0.77	+1.4
4,553,043	+		AO353_20775	0.77	+0.0
4,553,043	+		AO353_20775	0.77	+0.1
4,553,043	+		AO353_20775	0.77	+1.3
4,553,043	+		AO353_20775	0.77	+0.8
4,553,044	-		AO353_20775	0.77	+0.7
4,553,062	+		AO353_20775	0.80	-1.6
4,553,063	-		AO353_20775	0.80	+2.4
4,553,130	+		AO353_20775	0.89	+0.8
4,553,131	-		AO353_20775	0.89	+0.5
4,553,131	-		AO353_20775	0.89	+0.3
4,553,260	+				+1.0
4,553,263	+				+0.6
4,553,264	-				-0.6
4,553,344	+				-0.7
4,553,345	-				-0.2
4,553,345	-				-0.5
4,553,347	+				+1.8
4,553,347	+				-0.2
4,553,347	+				+0.7
4,553,347	+				-1.2
4,553,347	+				+0.8
4,553,347	+				-1.5
4,553,347	+				-0.2
4,553,348	-				-0.7
4,553,348	-				+1.2
4,553,348	-				-0.2
4,553,348	-				+0.7
4,553,348	-				-0.2
4,553,348	-				+0.2
4,553,353	+				-1.7
4,553,353	+				+0.0
4,553,362	+				-0.2
4,553,363	-				-2.2
4,553,363	-				+0.2
4,553,363	-				-0.9
4,553,366	+				+0.8
4,553,367	-				-1.0
4,553,367	-				-0.7
4,553,435	+				-1.7
4,553,530	+		AO353_20780	0.30	-0.5
4,553,530	+		AO353_20780	0.30	-0.7
4,553,531	-		AO353_20780	0.30	+0.4
4,553,612	+				+0.3
4,553,613	-		AO353_20780	0.48	-0.8
4,553,613	-		AO353_20780	0.48	+0.4
4,553,613	-		AO353_20780	0.48	+0.8
4,553,613	-		AO353_20780	0.48	+0.2
4,553,613	-		AO353_20780	0.48	-0.9
4,553,613	-		AO353_20780	0.48	+0.1
4,553,613	-		AO353_20780	0.48	+0.8
4,553,615	+		AO353_20780	0.49	-0.5
4,553,615	+		AO353_20780	0.49	+0.0
4,553,616	-		AO353_20780	0.49	-0.2
4,553,616	-		AO353_20780	0.49	-1.3
4,553,616	-		AO353_20780	0.49	+3.2
4,553,653	-		AO353_20780	0.57	-1.0
4,553,653	-		AO353_20780	0.57	-0.7
4,553,653	-		AO353_20780	0.57	+1.3
4,553,909	+				+0.3
4,553,909	+				+0.8
4,553,910	-				+2.8
4,553,910	-				+0.8
4,553,910	-				-0.7
4,553,930	+				+0.5
4,553,931	-				+0.5
4,553,931	-				+1.4
4,553,954	+				+0.3
4,553,954	+				+0.0
4,553,955	-				+1.4
4,553,955	-				-0.5
4,554,107	+		AO353_20785	0.15	-0.9
4,554,122	+		AO353_20785	0.23	+0.1
4,554,122	+		AO353_20785	0.23	-1.2
4,554,123	-		AO353_20785	0.23	+1.4
4,554,123	-		AO353_20785	0.23	+0.1
4,554,123	-		AO353_20785	0.23	+1.6
4,554,123	-		AO353_20785	0.23	+0.5
4,554,123	-		AO353_20785	0.23	-0.8
4,554,130	+		AO353_20785	0.27	-2.2
4,554,131	-		AO353_20785	0.27	-1.2