Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17785

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
3,918,173	+		AO353_17780	0.62	-0.0
3,918,256	-		AO353_17780	0.71	-0.6
3,918,363	+		AO353_17780	0.83	+1.3
3,918,401	+		AO353_17780	0.87	+0.4
3,918,401	+		AO353_17780	0.87	-1.5
3,918,401	+		AO353_17780	0.87	-0.1
3,918,401	+		AO353_17780	0.87	+1.3
3,918,401	+		AO353_17780	0.87	+1.0
3,918,401	+		AO353_17780	0.87	-1.0
3,918,401	+		AO353_17780	0.87	-0.6
3,918,401	+		AO353_17780	0.87	+0.7
3,918,401	+		AO353_17780	0.87	+2.0
3,918,401	+		AO353_17780	0.87	+2.7
3,918,401	+		AO353_17780	0.87	+0.6
3,918,401	+		AO353_17780	0.87	+1.0
3,918,401	+		AO353_17780	0.87	-1.2
3,918,401	+		AO353_17780	0.87	+0.4
3,918,401	+		AO353_17780	0.87	+1.5
3,918,401	+		AO353_17780	0.87	+0.2
3,918,401	+		AO353_17780	0.87	-0.2
3,918,401	+		AO353_17780	0.87	+1.0
3,918,401	+		AO353_17780	0.87	-1.3
3,918,401	+		AO353_17780	0.87	-0.6
3,918,402	-		AO353_17780	0.87	+1.0
3,918,402	-		AO353_17780	0.87	+0.1
3,918,402	-		AO353_17780	0.87	+0.8
3,918,402	-		AO353_17780	0.87	-0.8
3,918,402	-		AO353_17780	0.87	+0.7
3,918,402	-		AO353_17780	0.87	+0.1
3,918,402	-		AO353_17780	0.87	-0.6
3,918,402	-		AO353_17780	0.87	-0.4
3,918,402	-		AO353_17780	0.87	-1.0
3,918,402	-				-1.3
3,918,402	-		AO353_17780	0.87	-0.6
3,918,402	-		AO353_17780	0.87	-2.0
3,918,403	+		AO353_17780	0.87	+0.4
3,918,422	+		AO353_17780	0.89	-0.6
3,918,422	+		AO353_17780	0.89	-0.8
3,918,422	+		AO353_17780	0.89	-0.4
3,918,422	+		AO353_17780	0.89	-0.8
3,918,422	+		AO353_17780	0.89	-0.7
3,918,423	-		AO353_17780	0.89	-1.3
3,918,423	-		AO353_17780	0.89	+0.2
3,918,423	-		AO353_17780	0.89	+1.0
3,918,484	+				+0.3
3,918,484	+				+0.8
3,918,484	+				+1.0
3,918,484	+				+0.4
3,918,484	+				+2.3
3,918,485	-				+1.6
3,918,485	-				+2.6
3,918,485	-				-0.0
3,918,485	-				+0.2
3,918,556	+				-0.5
3,918,557	-				-1.8
3,918,637	+				+0.1
3,918,637	+				+1.0
3,918,637	+				-2.0
3,918,637	+				+0.4
3,918,637	+				-0.0
3,918,637	+				-1.2
3,918,637	+				+1.0
3,918,638	-				+0.7
3,918,638	-				-0.4
3,918,638	-				+0.7
3,918,638	-				-0.3
3,918,638	-				-0.8
3,918,638	-				+0.7
3,918,639	+				-0.6
3,918,639	+				+1.5
3,918,639	+				-0.5
3,918,639	+				-0.3
3,918,639	+				-0.7
3,918,640	-				-1.3
3,918,640	-				-0.0
3,918,640	-				-0.0
3,918,640	-				+0.6
3,918,640	-				-0.2
3,918,655	+				+0.5
3,918,655	+				-0.6
3,918,655	+				+1.6
3,918,656	-				-1.0
3,918,679	+				+0.7
3,918,679	+				-0.3
3,918,679	+				-0.0
3,918,679	+				+0.1
3,918,679	+				-0.1
3,918,680	-				-2.2
3,918,680	-				-0.6
3,918,680	-				+0.3
3,918,685	+				+0.9
3,918,685	+				+1.1
3,918,686	-				-0.4
3,918,730	+				-0.6
3,918,730	+				-1.3
3,918,730	+				+2.4
3,918,731	-				-0.3
3,918,731	-				-0.7
3,918,731	-				+0.5
3,918,731	-				+0.5
3,918,770	+				-0.4
3,918,771	-				-0.0
3,918,781	+				-1.6
3,918,865	+				-1.0
3,918,874	+				-1.1
3,918,874	+				+1.4
3,918,874	+				+0.2
3,918,875	-				-1.4
3,918,875	-				+1.3
3,918,875	-				+0.6
3,918,918	-				-0.6
3,918,918	-				-0.0
3,918,959	+				+1.0
3,918,960	-				+0.3
3,918,960	-				-0.2
3,918,979	+				-0.6
3,918,979	+				+0.8
3,918,979	+				+0.3
3,918,979	+				+0.1
3,918,980	-				-1.3
3,918,995	+				-0.2
3,918,995	+				-0.0
3,918,995	+				+0.7
3,919,015	+				+0.7
3,919,015	+				-0.0
3,919,016	-				-1.0
3,919,016	-				+1.9
3,919,075	+				-0.0
3,919,075	+				-1.0
3,919,075	+				-0.1
3,919,075	+				+1.6
3,919,075	+				-1.2
3,919,075	+				+0.7
3,919,075	+				-0.6
3,919,075	+				-0.0
3,919,076	-				-1.3
3,919,076	-				+2.0
3,919,076	-				+1.0
3,919,076	-				+0.5
3,919,076	-				-0.0
3,919,076	-				-0.0
3,919,076	-				-1.0
3,919,087	+				-0.0
3,919,087	+				+0.4
3,919,088	-				+1.0
3,919,088	-				-1.8
3,919,183	+		AO353_17785	0.58	-0.4
3,919,183	+		AO353_17785	0.58	-2.0
3,919,183	+		AO353_17785	0.58	-0.4
3,919,184	-		AO353_17785	0.58	+0.4
3,919,184	-		AO353_17785	0.58	-0.0
3,919,184	-		AO353_17785	0.58	-1.0
3,919,261	+				+1.3
3,919,261	+				-0.0
3,919,261	+				+0.8
3,919,261	+				+0.2
3,919,261	+				+0.8
3,919,261	+				-1.5
3,919,261	+				+1.9
3,919,261	+				+0.6
3,919,261	+				-0.0
3,919,261	+				-1.3
3,919,261	+				-0.0
3,919,262	-				+0.8
3,919,262	-				-0.6
3,919,262	-				-0.2
3,919,268	+				+0.7
3,919,268	+				-0.3
3,919,268	+				+1.0
3,919,268	+				+0.6
3,919,269	-				+1.4
3,919,269	-				-0.5
3,919,269	-				-0.9
3,919,302	+				-1.6
3,919,302	+				-0.0
3,919,302	+				-0.3
3,919,302	+				+0.4
3,919,303	-				+1.0
3,919,303	-				-0.4
3,919,303	-				+1.2
3,919,303	-				+0.3
3,919,303	-				-1.3
3,919,372	+				-1.0
3,919,372	+				+2.0
3,919,431	+				-1.1
3,919,431	+				-0.6
3,919,432	-				-0.8
3,919,432	-				+0.4
3,919,432	-				-0.3
3,919,482	-				+1.0
3,919,482	-				+1.0
3,919,495	+				-0.3
3,919,495	+				-0.4
3,919,496	-				+0.2
3,919,496	-				+0.6
3,919,575	+				-0.3
3,919,576	-				+0.6
3,919,812	-		AO353_17790	0.31	+1.7
3,919,812	-		AO353_17790	0.31	+2.0
3,919,885	+		AO353_17790	0.39	+0.7
3,919,886	-		AO353_17790	0.39	+0.4
3,919,886	-		AO353_17790	0.39	+1.2
3,919,960	+		AO353_17790	0.46	+1.0
3,919,960	+		AO353_17790	0.46	+0.4
3,919,960	+		AO353_17790	0.46	-2.0
3,919,960	+		AO353_17790	0.46	-0.8
3,919,961	-		AO353_17790	0.47	-1.3
3,919,961	-		AO353_17790	0.47	+1.3
3,919,979	+		AO353_17790	0.48	-0.2
3,919,979	+		AO353_17790	0.48	-0.4
3,919,979	+		AO353_17790	0.48	-1.0
3,919,979	+		AO353_17790	0.48	-0.4
3,919,979	+		AO353_17790	0.48	-0.1
3,919,979	+		AO353_17790	0.48	-0.0
3,919,979	+		AO353_17790	0.48	+0.4
3,919,979	+		AO353_17790	0.48	+0.1
3,919,980	-		AO353_17790	0.49	-0.7
3,919,980	-		AO353_17790	0.49	-0.6
3,919,980	-		AO353_17790	0.49	-0.1
3,919,980	-		AO353_17790	0.49	-2.0
3,919,980	-		AO353_17790	0.49	+0.6
3,920,231	+		AO353_17790	0.74	+0.5
3,920,231	+		AO353_17790	0.74	-0.5
3,920,232	-		AO353_17790	0.75	-0.0
3,920,239	+		AO353_17790	0.75	-2.2
3,920,239	+		AO353_17790	0.75	+2.0
3,920,239	+		AO353_17790	0.75	+0.7
3,920,239	+		AO353_17790	0.75	+0.5
3,920,239	+		AO353_17790	0.75	+1.0
3,920,239	+		AO353_17790	0.75	+0.7
3,920,239	+		AO353_17790	0.75	-0.1
3,920,239	+		AO353_17790	0.75	-0.8
3,920,240	-		AO353_17790	0.75	-1.9
3,920,240	-		AO353_17790	0.75	-0.0
3,920,240	-		AO353_17790	0.75	-0.3
3,920,240	-		AO353_17790	0.75	+2.0
3,920,240	-		AO353_17790	0.75	-0.4