Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17515

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
3,864,544	+		AO353_17505	0.67	+0.7
3,864,544	+		AO353_17505	0.67	+1.3
3,864,544	+		AO353_17505	0.67	+0.6
3,864,544	+		AO353_17505	0.67	-0.3
3,864,545	-		AO353_17505	0.67	+3.0
3,864,545	-		AO353_17505	0.67	+1.0
3,864,545	-		AO353_17505	0.67	+0.8
3,864,552	-		AO353_17505	0.69	-0.8
3,864,573	-		AO353_17505	0.76	+0.5
3,864,610	+		AO353_17505	0.88	+0.5
3,864,610	+		AO353_17505	0.88	+1.0
3,864,610	+		AO353_17505	0.88	-0.2
3,864,610	+		AO353_17505	0.88	-1.0
3,864,610	+		AO353_17505	0.88	+0.8
3,864,610	+		AO353_17505	0.88	+2.6
3,864,611	-		AO353_17505	0.88	+2.0
3,864,611	-		AO353_17505	0.88	+0.3
3,864,611	-		AO353_17505	0.88	+2.0
3,864,611	-		AO353_17505	0.88	+0.0
3,864,611	-		AO353_17505	0.88	+0.1
3,864,611	-		AO353_17505	0.88	-1.2
3,864,695	-				+0.5
3,864,854	+		AO353_17510	0.29	+1.0
3,864,854	+		AO353_17510	0.29	+1.0
3,864,854	+		AO353_17510	0.29	-0.2
3,864,854	+		AO353_17510	0.29	+0.0
3,864,854	+		AO353_17510	0.29	-0.3
3,864,854	+		AO353_17510	0.29	+0.9
3,864,854	+		AO353_17510	0.29	-0.2
3,864,855	-		AO353_17510	0.29	-1.0
3,864,855	-		AO353_17510	0.29	+1.2
3,864,855	-		AO353_17510	0.29	+2.0
3,864,855	-		AO353_17510	0.29	+0.2
3,864,855	-		AO353_17510	0.29	+2.0
3,864,855	-		AO353_17510	0.29	+1.0
3,864,855	-		AO353_17510	0.29	+0.8
3,864,860	+		AO353_17510	0.30	+1.3
3,864,861	-				+2.0
3,864,871	-		AO353_17510	0.32	+1.0
3,864,871	-		AO353_17510	0.32	+0.3
3,864,871	-		AO353_17510	0.32	-1.2
3,864,971	+		AO353_17510	0.50	-1.6
3,864,971	+		AO353_17510	0.50	-0.6
3,864,971	+		AO353_17510	0.50	+0.5
3,864,972	-		AO353_17510	0.50	+0.6
3,864,972	-		AO353_17510	0.50	+0.0
3,864,972	-		AO353_17510	0.50	-0.6
3,864,972	-		AO353_17510	0.50	+0.8
3,864,972	-		AO353_17510	0.50	+0.9
3,864,972	-		AO353_17510	0.50	-0.9
3,865,016	-		AO353_17510	0.58	+0.7
3,865,047	+		AO353_17510	0.63	+0.2
3,865,047	+		AO353_17510	0.63	-0.6
3,865,047	+		AO353_17510	0.63	+0.8
3,865,047	+		AO353_17510	0.63	+0.2
3,865,047	+		AO353_17510	0.63	-0.1
3,865,047	+		AO353_17510	0.63	+0.5
3,865,048	-		AO353_17510	0.63	+0.1
3,865,048	-		AO353_17510	0.63	+0.9
3,865,049	+		AO353_17510	0.63	+0.7
3,865,085	+		AO353_17510	0.70	+0.4
3,865,085	+		AO353_17510	0.70	-1.2
3,865,106	+		AO353_17510	0.74	+0.8
3,865,107	-		AO353_17510	0.74	+0.1
3,865,107	-		AO353_17510	0.74	-0.6
3,865,172	+		AO353_17510	0.85	-0.7
3,865,237	+				+0.8
3,865,237	+				-1.3
3,865,237	+				-0.8
3,865,237	+				+0.0
3,865,237	+				-0.5
3,865,237	+				+1.0
3,865,237	+				+0.0
3,865,237	+				-0.5
3,865,237	+				-2.0
3,865,237	+				+0.5
3,865,238	-				-0.6
3,865,238	-				+0.3
3,865,238	-				-0.3
3,865,238	-				-0.1
3,865,238	-				-0.5
3,865,238	-				+0.7
3,865,238	-				+0.6
3,865,238	-				+0.5
3,865,238	-				+0.5
3,865,238	-				-1.9
3,865,238	-				+0.1
3,865,238	-				+0.7
3,865,240	+				-0.2
3,865,241	-				-0.3
3,865,241	-				+0.6
3,865,241	-				+0.4
3,865,253	+				-0.8
3,865,254	-				-1.1
3,865,254	-				-1.8
3,865,333	-				-1.3
3,865,375	+				+2.4
3,865,375	+				+0.0
3,865,376	-				+1.0
3,865,376	-				-0.4
3,865,378	-				-0.3
3,865,396	+				+0.7
3,865,471	+				-0.8
3,865,471	+				-1.6
3,865,471	+				-0.2
3,865,471	+				+0.7
3,865,471	+				-1.7
3,865,471	+				+0.0
3,865,472	-				-1.7
3,865,472	-				+0.0
3,865,472	-				-0.6
3,865,472	-				+0.7
3,865,472	-				+0.6
3,865,472	-				-1.2
3,865,472	-				-0.9
3,865,472	-				+0.5
3,865,472	-				-0.4
3,865,472	-				-0.7
3,865,472	-				-0.6
3,865,472	-				+0.2
3,865,472	-				-1.2
3,865,472	-				+1.4
3,865,517	+		AO353_17515	0.24	-1.4
3,865,517	+		AO353_17515	0.24	-1.1
3,865,517	+		AO353_17515	0.24	-1.3
3,865,517	+		AO353_17515	0.24	+0.0
3,865,518	-		AO353_17515	0.25	-1.4
3,865,518	-		AO353_17515	0.25	-0.5
3,865,518	-		AO353_17515	0.25	-1.3
3,865,518	-		AO353_17515	0.25	-0.8
3,865,620	+		AO353_17515	0.63	-0.8
3,865,620	+		AO353_17515	0.63	-1.3
3,865,621	-		AO353_17515	0.63	-0.6
3,865,621	-		AO353_17515	0.63	+1.6
3,865,679	+		AO353_17515	0.84	-0.2
3,865,679	+		AO353_17515	0.84	+1.0
3,865,680	-		AO353_17515	0.85	-1.0
3,865,680	-		AO353_17515	0.85	-2.4
3,865,680	-		AO353_17515	0.85	-1.0
3,865,708	+				-0.3
3,865,708	+				-0.3
3,865,708	+				-0.2
3,865,708	+				+0.0
3,865,708	+				+0.4
3,865,708	+				-0.6
3,865,708	+				+0.2
3,865,708	+				-0.6
3,865,709	-				-0.2
3,865,709	-				-1.0
3,865,709	-				+0.0
3,865,709	-				-0.2
3,865,709	-				+0.6
3,865,709	-				+0.3
3,865,709	-				-1.8
3,865,709	-				+0.6
3,865,709	-				+2.0
3,865,709	-				+1.6
3,865,709	-				-0.3
3,865,709	-				+2.0
3,865,709	-				-1.0
3,865,710	+				-0.2
3,865,710	+				+1.0
3,865,710	+				-1.2
3,865,710	+				+0.4
3,865,710	+				-1.2
3,865,710	+				+0.2
3,865,710	+				+0.5
3,865,710	+				-0.9
3,865,710	+				+1.0
3,865,710	+				+0.5
3,865,710	+				-0.6
3,865,710	+				-0.4
3,865,710	+				-0.2
3,865,710	+				+0.4
3,865,710	+				+0.1
3,865,710	+				-0.6
3,865,710	+				-0.2
3,865,710	+				-0.1
3,865,710	+				+1.6
3,865,711	-				-1.2
3,865,711	-				+1.3
3,865,711	-				-1.8
3,865,711	-				-0.3
3,865,711	-				+3.0
3,865,711	-				+0.9
3,865,711	-				+1.5
3,865,711	-				+0.7
3,865,711	-				-0.1
3,865,711	-				-1.7
3,865,711	-				+0.4
3,865,711	-				-3.0
3,865,711	-				-1.3
3,865,711	-				+0.1
3,865,711	-				+1.6
3,865,735	+				+0.0
3,865,735	+				-0.4
3,865,735	+				+1.3
3,865,735	+				-0.6
3,865,735	+				+1.0
3,865,735	+				-0.2
3,865,736	-				+0.5
3,865,736	-				+0.4
3,865,736	-				-0.8
3,865,736	-				-0.3
3,865,736	-				+0.6
3,865,736	-				-0.6
3,865,736	-				+0.0
3,865,736	-				+0.0
3,865,736	-				+0.0
3,865,736	-				+1.0
3,865,736	-				-1.1
3,865,736	-				+1.0
3,865,736	-				-0.1
3,865,736	-				-1.2
3,865,736	-				-0.4
3,865,736	-				-2.2
3,865,788	-				-0.1
3,865,813	+				-0.7
3,865,813	+				+0.1
3,865,813	+				+1.0
3,865,813	+				+0.8
3,865,813	+				+1.0
3,865,813	+				-1.3
3,865,814	-				+1.0
3,865,814	-				+1.6
3,865,814	-				-0.2
3,865,829	+				+0.2
3,865,863	+				-0.6
3,865,863	+				+1.3
3,865,863	+				+0.1
3,865,864	-				+0.2
3,865,864	-				+2.0
3,865,867	+				+1.0
3,865,867	+				+1.0
3,865,867	+				-0.6
3,865,867	+				-0.1
3,865,867	+				-0.2
3,865,867	+				-2.4
3,865,867	+				-0.4
3,865,867	+				+0.0
3,865,867	+				+0.1
3,865,867	+				-0.3
3,865,867	+				-1.0
3,865,867	+				+0.2
3,865,867	+				+0.0
3,865,867	+				+0.0
3,865,867	+				-0.7
3,865,867	+				+0.3
3,865,867	+				+0.0
3,865,867	+				+1.0
3,865,867	+				+1.6
3,865,867	+				+0.6
3,865,867	+				+1.0
3,865,867	+				-0.6
3,865,867	+				+1.6
3,865,867	+				+0.2
3,865,867	+				-0.4
3,865,868	-				+0.5
3,865,868	-				+1.4
3,865,868	-				+1.3
3,865,868	-				+1.6
3,865,868	-				-1.0
3,865,868	-				-0.7
3,865,868	-				-1.0
3,865,868	-				+0.9
3,865,868	-				+1.0
3,865,868	-				+0.5
3,865,868	-				+0.4
3,865,868	-				+0.3
3,865,868	-				+2.0
3,865,868	-				+0.8
3,865,868	-				+0.4
3,865,868	-				+0.0
3,865,868	-				+0.3
3,865,868	-				-2.0
3,865,868	-				-1.6
3,865,868	-				+1.0
3,865,868	-				-0.6
3,865,868	-				-0.5
3,865,868	-				+1.7
3,865,868	-				-1.0
3,865,868	-				-0.6
3,865,868	-				+0.3
3,865,868	-				-0.8
3,865,962	+				-0.6
3,865,962	+				-1.3
3,865,962	+				+0.6
3,865,963	-				-0.4
3,865,963	-				-0.4
3,865,963	-				+1.0
3,865,963	-				-0.2
3,865,964	+				+0.7
3,865,964	+				+3.0
3,865,964	+				+0.4
3,865,964	+				+0.6
3,865,964	+				-0.8
3,865,964	+				+0.6
3,865,964	+				-0.1
3,865,964	+				-0.6
3,865,964	+				-2.0
3,865,964	+				+0.3
3,865,964	+				+0.4
3,865,965	-				+0.5
3,865,965	-				-0.3
3,865,965	-				+0.4
3,865,965	-				+1.1
3,865,965	-				-0.2
3,865,965	-				-1.8
3,865,965	-				-0.1
3,865,965	-				+0.7
3,865,965	-				+1.9
3,865,965	-				-0.8
3,865,965	-				+0.5
3,865,965	-				-0.1
3,865,965	-				-0.9
3,865,965	-				-2.3
3,865,965	-				+0.1
3,865,965	-				+0.3
3,865,965	-				+0.2
3,865,965	-				+0.2
3,865,965	-				-2.0
3,866,000	+				+0.0
3,866,001	-				-2.2
3,866,066	+				+0.4
3,866,066	+				-1.0
3,866,066	+				-1.6
3,866,066	+				+0.6
3,866,066	+				-1.1
3,866,066	+				+0.5
3,866,066	+				-0.1
3,866,066	+				+1.0
3,866,066	+				+1.0
3,866,066	+				-0.1
3,866,067	-				-0.6
3,866,067	-				-0.6
3,866,067	-				+1.0
3,866,067	-				-0.6
3,866,070	+				+2.4
3,866,070	+				+0.4
3,866,070	+				+0.2
3,866,070	+				-2.0
3,866,070	+				-0.6
3,866,071	-				-0.2
3,866,071	-				+1.2
3,866,071	-				+0.2
3,866,071	-				-0.3
3,866,071	-				-0.7
3,866,071	-				+0.0
3,866,071	-				+0.2
3,866,071	-				-0.6
3,866,071	-				-0.2
3,866,071	-				+0.0
3,866,100	+				-0.2
3,866,101	-				+1.0
3,866,116	-				+0.7
3,866,225	+		AO353_17520	0.43	-0.1
3,866,226	-		AO353_17520	0.43	-1.2
3,866,226	-		AO353_17520	0.43	+0.5
3,866,303	+		AO353_17520	0.74	-1.0
3,866,303	+		AO353_17520	0.74	+2.6
3,866,303	+		AO353_17520	0.74	+2.0
3,866,304	-		AO353_17520	0.75	-0.4
3,866,304	-		AO353_17520	0.75	+0.0
3,866,304	-		AO353_17520	0.75	-1.8
3,866,345	+				-0.9
3,866,346	-				+0.5
3,866,346	-				+0.8
3,866,403	+				-0.1
3,866,403	+				+1.0
3,866,403	+				+1.5
3,866,403	+				+0.4
3,866,403	+				-0.3
3,866,403	+				-0.6
3,866,404	-				+0.6
3,866,441	+				+1.0
3,866,450	+				-1.0
3,866,465	+				+0.4
3,866,465	+				+0.5
3,866,488	+				+0.3
3,866,488	+				-1.3
3,866,488	+				+1.3
3,866,488	+				+0.7
3,866,489	-				-2.6
3,866,489	-				-0.2
3,866,489	-				-0.1
3,866,489	-				-0.5
3,866,489	-				-1.2
3,866,489	-				+0.0
3,866,551	+				-1.0
3,866,551	+				+0.3
3,866,552	-				-2.0
3,866,622	+				-0.1
3,866,656	+				-1.2
3,866,656	+				-0.3
3,866,657	-				+0.7