Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10540

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
2,312,109	+		AO353_10535	0.49	+0.8
2,312,303	+		AO353_10535	0.65	+1.1
2,312,304	-		AO353_10535	0.65	+2.2
2,312,331	+		AO353_10535	0.67	+0.7
2,312,331	+		AO353_10535	0.67	-0.9
2,312,426	+		AO353_10535	0.75	-0.2
2,312,427	-		AO353_10535	0.75	+2.0
2,312,485	-		AO353_10535	0.80	+0.8
2,312,683	+				+0.3
2,312,683	+				+1.1
2,312,684	-				+0.6
2,312,684	-				-2.6
2,312,684	-				+2.6
2,312,684	-				+0.3
2,312,728	-				+1.2
2,312,728	-				+1.7
2,312,821	+				+0.8
2,312,821	+				+1.4
2,312,821	+				+0.1
2,312,822	-				+2.0
2,312,822	-				+0.4
2,312,822	-				-1.2
2,312,822	-				+3.4
2,312,919	+				+0.1
2,312,919	+				+1.4
2,312,919	+				-0.8
2,312,919	+				-0.2
2,312,919	+				-1.3
2,312,919	+				+0.2
2,312,919	+				-1.6
2,312,920	-				+1.4
2,312,920	-				+1.6
2,312,920	-				+1.0
2,312,920	-				+3.3
2,312,920	-				-0.2
2,312,920	-				+2.4
2,312,920	-				+4.4
2,312,920	-				+2.2
2,312,920	-				+1.6
2,312,920	-				+3.2
2,312,920	-				+1.9
2,312,946	+				+0.7
2,312,947	-				+2.7
2,312,947	-				+2.5
2,312,953	+				+2.4
2,312,953	+				+2.6
2,312,953	+				+1.5
2,312,954	-				+2.8
2,312,954	-				+2.7
2,312,972	+				+2.9
2,312,972	+				+2.7
2,312,972	+				+1.9
2,312,972	+				+2.3
2,312,972	+				+1.1
2,312,973	-				+3.7
2,313,028	-				+2.8
2,313,028	-				+1.5
2,313,028	-				+0.8
2,313,028	-				+1.9
2,313,028	-				+0.2
2,313,034	-				+2.4
2,313,083	+		AO353_10540	0.11	+2.5
2,313,200	+		AO353_10540	0.23	+3.1
2,313,200	+		AO353_10540	0.23	+5.0
2,313,200	+		AO353_10540	0.23	+1.5
2,313,200	+		AO353_10540	0.23	+2.0
2,313,201	-		AO353_10540	0.23	+2.8
2,313,201	-		AO353_10540	0.23	+2.1
2,313,201	-		AO353_10540	0.23	+1.7
2,313,201	-		AO353_10540	0.23	+2.9
2,313,201	-		AO353_10540	0.23	+3.2
2,313,201	-		AO353_10540	0.23	+0.5
2,313,215	+		AO353_10540	0.25	+2.2
2,313,215	+		AO353_10540	0.25	+2.3
2,313,215	+		AO353_10540	0.25	+2.3
2,313,215	+		AO353_10540	0.25	+0.8
2,313,215	+		AO353_10540	0.25	+1.2
2,313,215	+		AO353_10540	0.25	+2.3
2,313,215	+		AO353_10540	0.25	+4.1
2,313,215	+		AO353_10540	0.25	+3.0
2,313,215	+		AO353_10540	0.25	-0.3
2,313,215	+		AO353_10540	0.25	+3.9
2,313,215	+		AO353_10540	0.25	+2.3
2,313,215	+		AO353_10540	0.25	+0.7
2,313,215	+		AO353_10540	0.25	+2.2
2,313,215	+		AO353_10540	0.25	+3.5
2,313,215	+		AO353_10540	0.25	+1.9
2,313,215	+		AO353_10540	0.25	+2.2
2,313,215	+		AO353_10540	0.25	+4.3
2,313,215	+		AO353_10540	0.25	+1.5
2,313,215	+		AO353_10540	0.25	+2.8
2,313,215	+		AO353_10540	0.25	+2.9
2,313,215	+		AO353_10540	0.25	+0.9
2,313,215	+		AO353_10540	0.25	+2.6
2,313,215	+		AO353_10540	0.25	+1.4
2,313,215	+		AO353_10540	0.25	+3.5
2,313,215	+		AO353_10540	0.25	+4.0
2,313,215	+		AO353_10540	0.25	+2.2
2,313,215	+		AO353_10540	0.25	+1.0
2,313,215	+		AO353_10540	0.25	+4.5
2,313,215	+		AO353_10540	0.25	+3.8
2,313,215	+		AO353_10540	0.25	+3.4
2,313,215	+		AO353_10540	0.25	+1.3
2,313,215	+		AO353_10540	0.25	+2.3
2,313,215	+		AO353_10540	0.25	+2.4
2,313,215	+		AO353_10540	0.25	+1.6
2,313,216	-		AO353_10540	0.25	+3.6
2,313,216	-		AO353_10540	0.25	+2.1
2,313,216	-		AO353_10540	0.25	+2.0
2,313,216	-		AO353_10540	0.25	+3.1
2,313,216	-		AO353_10540	0.25	+2.3
2,313,216	-		AO353_10540	0.25	+1.2
2,313,216	-		AO353_10540	0.25	+2.2
2,313,216	-		AO353_10540	0.25	+2.4
2,313,216	-		AO353_10540	0.25	-0.6
2,313,216	-		AO353_10540	0.25	+1.2
2,313,216	-		AO353_10540	0.25	+1.8
2,313,216	-		AO353_10540	0.25	+1.1
2,313,216	-		AO353_10540	0.25	+2.2
2,313,216	-		AO353_10540	0.25	+2.6
2,313,216	-		AO353_10540	0.25	+2.6
2,313,216	-		AO353_10540	0.25	+0.7
2,313,216	-		AO353_10540	0.25	+2.7
2,313,216	-		AO353_10540	0.25	-0.8
2,313,216	-		AO353_10540	0.25	+0.8
2,313,216	-		AO353_10540	0.25	+2.2
2,313,217	+		AO353_10540	0.25	+2.2
2,313,217	+		AO353_10540	0.25	+2.8
2,313,233	+		AO353_10540	0.26	+2.3
2,313,233	+		AO353_10540	0.26	+1.2
2,313,233	+		AO353_10540	0.26	+3.5
2,313,233	+		AO353_10540	0.26	+1.1
2,313,233	+		AO353_10540	0.26	+3.2
2,313,233	+		AO353_10540	0.26	+3.5
2,313,234	-				+3.4
2,313,234	-		AO353_10540	0.27	+2.4
2,313,234	-				+4.2
2,313,234	-		AO353_10540	0.27	+3.1
2,313,252	+		AO353_10540	0.28	+2.1
2,313,252	+		AO353_10540	0.28	+3.1
2,313,379	+		AO353_10540	0.42	+1.0
2,313,379	+		AO353_10540	0.42	+0.7
2,313,379	+		AO353_10540	0.42	+2.9
2,313,380	-		AO353_10540	0.42	+0.0
2,313,380	-		AO353_10540	0.42	+1.4
2,313,380	-		AO353_10540	0.42	+2.9
2,313,380	-		AO353_10540	0.42	+2.3
2,313,380	-		AO353_10540	0.42	+1.0
2,313,380	-		AO353_10540	0.42	+2.8
2,313,380	-		AO353_10540	0.42	+2.5
2,313,380	-		AO353_10540	0.42	+3.0
2,313,383	+		AO353_10540	0.42	+3.9
2,313,383	+		AO353_10540	0.42	+0.1
2,313,383	+		AO353_10540	0.42	+2.2
2,313,383	+		AO353_10540	0.42	+3.6
2,313,383	+		AO353_10540	0.42	+1.6
2,313,383	+		AO353_10540	0.42	+2.8
2,313,383	+		AO353_10540	0.42	+1.4
2,313,383	+		AO353_10540	0.42	+3.2
2,313,383	+		AO353_10540	0.42	+2.0
2,313,383	+		AO353_10540	0.42	+1.9
2,313,383	+		AO353_10540	0.42	-0.2
2,313,383	+		AO353_10540	0.42	+1.6
2,313,383	+		AO353_10540	0.42	+3.0
2,313,383	+		AO353_10540	0.42	+1.8
2,313,383	+		AO353_10540	0.42	+2.6
2,313,383	+		AO353_10540	0.42	+0.1
2,313,383	+		AO353_10540	0.42	+0.6
2,313,383	+		AO353_10540	0.42	+0.6
2,313,383	+		AO353_10540	0.42	+1.6
2,313,384	-		AO353_10540	0.42	+4.1
2,313,384	-		AO353_10540	0.42	+0.9
2,313,384	-		AO353_10540	0.42	+3.2
2,313,384	-		AO353_10540	0.42	+0.8
2,313,384	-		AO353_10540	0.42	+3.1
2,313,384	-		AO353_10540	0.42	+3.3
2,313,384	-		AO353_10540	0.42	+2.1
2,313,384	-		AO353_10540	0.42	+2.2
2,313,384	-		AO353_10540	0.42	+0.4
2,313,384	-		AO353_10540	0.42	+2.4
2,313,384	-		AO353_10540	0.42	+3.2
2,313,384	-		AO353_10540	0.42	+1.4
2,313,384	-		AO353_10540	0.42	+2.1
2,313,384	-		AO353_10540	0.42	+5.1
2,313,389	+		AO353_10540	0.43	+1.9
2,313,389	+		AO353_10540	0.43	+0.5
2,313,389	+		AO353_10540	0.43	+2.9
2,313,389	+		AO353_10540	0.43	+2.5
2,313,389	+		AO353_10540	0.43	+1.9
2,313,389	+		AO353_10540	0.43	+1.3
2,313,389	+		AO353_10540	0.43	+3.7
2,313,389	+		AO353_10540	0.43	+1.6
2,313,389	+		AO353_10540	0.43	+1.1
2,313,389	+		AO353_10540	0.43	+2.6
2,313,389	+		AO353_10540	0.43	+2.6
2,313,389	+		AO353_10540	0.43	-0.1
2,313,389	+		AO353_10540	0.43	+0.6
2,313,389	+		AO353_10540	0.43	+1.6
2,313,389	+		AO353_10540	0.43	+0.7
2,313,389	+		AO353_10540	0.43	-0.0
2,313,389	+		AO353_10540	0.43	+1.2
2,313,389	+		AO353_10540	0.43	-1.8
2,313,389	+		AO353_10540	0.43	+2.6
2,313,389	+		AO353_10540	0.43	+1.7
2,313,389	+		AO353_10540	0.43	+3.1
2,313,389	+		AO353_10540	0.43	+1.2
2,313,389	+		AO353_10540	0.43	+2.8
2,313,389	+		AO353_10540	0.43	+2.5
2,313,390	-		AO353_10540	0.43	+2.5
2,313,390	-		AO353_10540	0.43	+1.2
2,313,390	-		AO353_10540	0.43	+1.4
2,313,390	-		AO353_10540	0.43	+1.5
2,313,390	-		AO353_10540	0.43	+3.4
2,313,390	-		AO353_10540	0.43	+2.0
2,313,390	-		AO353_10540	0.43	+2.4
2,313,390	-		AO353_10540	0.43	+1.2
2,313,390	-		AO353_10540	0.43	+0.0
2,313,390	-		AO353_10540	0.43	+2.4
2,313,390	-		AO353_10540	0.43	+2.4
2,313,390	-		AO353_10540	0.43	+2.5
2,313,390	-		AO353_10540	0.43	+2.5
2,313,390	-		AO353_10540	0.43	+1.2
2,313,390	-		AO353_10540	0.43	+2.0
2,313,435	+		AO353_10540	0.47	+1.7
2,313,435	+		AO353_10540	0.47	+2.1
2,313,435	+		AO353_10540	0.47	+5.0
2,313,435	+		AO353_10540	0.47	+2.4
2,313,436	-		AO353_10540	0.48	+1.0
2,313,436	-		AO353_10540	0.48	+1.5
2,313,436	-		AO353_10540	0.48	+4.1
2,313,436	-		AO353_10540	0.48	+1.7
2,313,436	-		AO353_10540	0.48	+1.7
2,313,436	-		AO353_10540	0.48	+2.3
2,313,436	-		AO353_10540	0.48	+0.6
2,313,539	+		AO353_10540	0.58	+2.7
2,313,539	+		AO353_10540	0.58	+1.7
2,313,540	-		AO353_10540	0.58	+1.4
2,313,540	-		AO353_10540	0.58	+1.9
2,313,540	-		AO353_10540	0.58	+1.6
2,313,689	+		AO353_10540	0.74	+1.0
2,313,689	+		AO353_10540	0.74	-1.9
2,313,689	+		AO353_10540	0.74	+1.9
2,313,690	-		AO353_10540	0.74	+1.7
2,313,690	-		AO353_10540	0.74	+1.6
2,313,690	-		AO353_10540	0.74	+0.1
2,313,690	-		AO353_10540	0.74	-0.2
2,313,690	-		AO353_10540	0.74	+1.4
2,313,833	+		AO353_10540	0.89	+2.3
2,313,833	+		AO353_10540	0.89	+0.9
2,313,833	+		AO353_10540	0.89	-0.1
2,313,833	+		AO353_10540	0.89	+1.4
2,313,834	-		AO353_10540	0.89	+1.9
2,313,834	-		AO353_10540	0.89	+1.3
2,313,834	-		AO353_10540	0.89	+3.0
2,313,834	-		AO353_10540	0.89	+2.5
2,313,834	-		AO353_10540	0.89	+2.3
2,313,834	-		AO353_10540	0.89	+1.9
2,313,834	-		AO353_10540	0.89	+1.5
2,313,834	-		AO353_10540	0.89	+2.6
2,314,114	+		AO353_10545	0.17	+1.0
2,314,114	+		AO353_10545	0.17	+1.5
2,314,115	-		AO353_10545	0.17	+0.5
2,314,115	-		AO353_10545	0.17	+2.4
2,314,227	-		AO353_10545	0.27	+2.6
2,314,312	-		AO353_10545	0.35	+0.8
2,314,547	+		AO353_10545	0.58	+3.7
2,314,547	+		AO353_10545	0.58	+3.9
2,314,547	+		AO353_10545	0.58	+1.6
2,314,547	+		AO353_10545	0.58	+2.2
2,314,547	+		AO353_10545	0.58	+3.6
2,314,547	+		AO353_10545	0.58	+2.0
2,314,548	-		AO353_10545	0.58	+1.6
2,314,548	-		AO353_10545	0.58	+1.2
2,314,548	-		AO353_10545	0.58	+2.5
2,314,548	-		AO353_10545	0.58	+2.6
2,314,548	-		AO353_10545	0.58	+2.4
2,314,548	-		AO353_10545	0.58	+3.0
2,314,548	-		AO353_10545	0.58	+2.3
2,314,548	-		AO353_10545	0.58	+1.4
2,314,548	-		AO353_10545	0.58	+2.5
2,314,807	-		AO353_10545	0.82	+0.5
2,314,823	+		AO353_10545	0.84	+3.4
2,314,823	+		AO353_10545	0.84	+2.3
2,314,823	+		AO353_10545	0.84	+3.2
2,314,823	+		AO353_10545	0.84	+0.4
2,314,823	+		AO353_10545	0.84	+2.1
2,314,823	+		AO353_10545	0.84	+2.0
2,314,823	+		AO353_10545	0.84	+3.2
2,314,823	+		AO353_10545	0.84	-0.9
2,314,823	+		AO353_10545	0.84	+2.4
2,314,824	-		AO353_10545	0.84	+3.2
2,314,824	-		AO353_10545	0.84	+3.1
2,314,824	-		AO353_10545	0.84	+2.7
2,314,824	-		AO353_10545	0.84	+2.6
2,314,876	+		AO353_10545	0.89	-0.5
2,314,876	+		AO353_10545	0.89	+2.9
2,314,876	+		AO353_10545	0.89	+3.2
2,314,876	+		AO353_10545	0.89	+3.0
2,314,876	+		AO353_10545	0.89	+0.4
2,314,876	+		AO353_10545	0.89	+4.3
2,314,876	+		AO353_10545	0.89	+4.6
2,314,876	+		AO353_10545	0.89	+2.8
2,314,876	+		AO353_10545	0.89	+3.0
2,314,876	+		AO353_10545	0.89	+3.1
2,314,876	+		AO353_10545	0.89	+2.4
2,314,876	+		AO353_10545	0.89	+1.8
2,314,876	+		AO353_10545	0.89	+0.9
2,314,876	+		AO353_10545	0.89	+2.4
2,314,876	+		AO353_10545	0.89	+1.4
2,314,876	+		AO353_10545	0.89	+2.7
2,314,876	+		AO353_10545	0.89	+2.7
2,314,876	+		AO353_10545	0.89	+2.2
2,314,876	+		AO353_10545	0.89	+3.0
2,314,876	+		AO353_10545	0.89	+1.6
2,314,876	+		AO353_10545	0.89	+3.0
2,314,876	+		AO353_10545	0.89	+3.3
2,314,876	+		AO353_10545	0.89	+3.7
2,314,876	+		AO353_10545	0.89	+1.8
2,314,876	+		AO353_10545	0.89	+1.6
2,314,876	+		AO353_10545	0.89	+3.6
2,314,876	+		AO353_10545	0.89	+3.0
2,314,876	+		AO353_10545	0.89	+2.6
2,314,877	-		AO353_10545	0.89	+2.3
2,314,877	-		AO353_10545	0.89	-0.6
2,314,877	-		AO353_10545	0.89	-1.9
2,314,877	-		AO353_10545	0.89	+1.9
2,314,877	-		AO353_10545	0.89	+1.4
2,314,877	-		AO353_10545	0.89	+3.1
2,314,877	-		AO353_10545	0.89	+3.1
2,314,877	-		AO353_10545	0.89	-0.4
2,314,877	-		AO353_10545	0.89	+2.5
2,314,877	-		AO353_10545	0.89	+1.9
2,314,877	-		AO353_10545	0.89	+0.5
2,314,877	-		AO353_10545	0.89	+2.5
2,314,877	-		AO353_10545	0.89	+0.4
2,314,877	-		AO353_10545	0.89	+2.4
2,314,877	-		AO353_10545	0.89	+2.5
2,314,877	-		AO353_10545	0.89	+2.1
2,314,877	-		AO353_10545	0.89	+2.1
2,314,877	-		AO353_10545	0.89	+1.9
2,314,877	-		AO353_10545	0.89	+2.8
2,314,877	-		AO353_10545	0.89	+1.8
2,314,877	-		AO353_10545	0.89	+2.9
2,314,877	-		AO353_10545	0.89	+1.8
2,314,877	-		AO353_10545	0.89	+1.3
2,314,877	-		AO353_10545	0.89	+2.4
2,314,877	-		AO353_10545	0.89	+3.0
2,314,877	-		AO353_10545	0.89	+2.7
2,314,877	-		AO353_10545	0.89	+0.4
2,314,877	-		AO353_10545	0.89	+3.0
2,314,877	-		AO353_10545	0.89	+1.9
2,314,877	-		AO353_10545	0.89	+4.1
2,314,927	+				+3.1
2,314,927	+				+1.7
2,314,928	-				-0.2
2,314,928	-				+1.8
2,314,928	-				+2.4
2,314,928	-				+2.5