Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10120

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
2,214,040	-		AO353_10110	0.64	-0.4
2,214,040	-		AO353_10110	0.64	-0.0
2,214,189	+		AO353_10110	0.77	-1.2
2,214,190	-		AO353_10110	0.77	+1.2
2,214,190	-		AO353_10110	0.77	-2.5
2,214,398	+				-0.2
2,214,398	+				+0.7
2,214,398	+				-1.2
2,214,398	+				-0.5
2,214,398	+				-0.2
2,214,398	+				+0.1
2,214,398	+				-0.8
2,214,398	+				-1.1
2,214,398	+				+1.7
2,214,398	+				+0.8
2,214,398	+				+0.6
2,214,399	-				+0.8
2,214,399	-				+0.5
2,214,399	-				+0.4
2,214,399	-				-0.0
2,214,399	-				-0.6
2,214,399	-				+0.4
2,214,399	-				-0.6
2,214,402	+				+0.8
2,214,402	+				-1.4
2,214,402	+				+0.3
2,214,402	+				+2.4
2,214,402	+				+0.4
2,214,402	+				+1.4
2,214,402	+				-0.0
2,214,402	+				-1.5
2,214,402	+				-0.2
2,214,402	+				-0.2
2,214,402	+				+0.6
2,214,402	+				+0.4
2,214,402	+				-0.5
2,214,402	+				+1.1
2,214,403	-				+1.2
2,214,403	-				+0.7
2,214,403	-				+0.8
2,214,403	-				+0.4
2,214,403	-				-2.1
2,214,403	-				-0.5
2,214,403	-				+2.2
2,214,403	-				-0.4
2,214,748	+		AO353_10115	0.37	-1.6
2,214,748	+		AO353_10115	0.37	+0.1
2,214,748	+		AO353_10115	0.37	-1.3
2,214,748	+		AO353_10115	0.37	-1.2
2,214,748	+		AO353_10115	0.37	+1.2
2,214,748	+		AO353_10115	0.37	-0.2
2,214,749	-		AO353_10115	0.37	-0.6
2,214,749	-		AO353_10115	0.37	-1.0
2,214,749	-		AO353_10115	0.37	+0.8
2,214,749	-		AO353_10115	0.37	+0.7
2,214,749	-		AO353_10115	0.37	+0.4
2,214,749	-		AO353_10115	0.37	+0.2
2,214,749	-		AO353_10115	0.37	-0.0
2,214,778	+		AO353_10115	0.44	+0.6
2,214,778	+		AO353_10115	0.44	+0.1
2,214,778	+		AO353_10115	0.44	+0.2
2,214,778	+		AO353_10115	0.44	-1.2
2,214,778	+		AO353_10115	0.44	+0.7
2,214,778	+		AO353_10115	0.44	+3.4
2,214,778	+		AO353_10115	0.44	+0.4
2,214,778	+		AO353_10115	0.44	-1.0
2,214,778	+		AO353_10115	0.44	+0.4
2,214,778	+		AO353_10115	0.44	+2.2
2,214,778	+		AO353_10115	0.44	-0.2
2,214,778	+		AO353_10115	0.44	-1.7
2,214,778	+		AO353_10115	0.44	+1.0
2,214,778	+		AO353_10115	0.44	-0.2
2,214,778	+		AO353_10115	0.44	-1.9
2,214,778	+		AO353_10115	0.44	+0.5
2,214,778	+		AO353_10115	0.44	-0.2
2,214,778	+		AO353_10115	0.44	-0.6
2,214,778	+		AO353_10115	0.44	-0.3
2,214,779	-		AO353_10115	0.45	+1.3
2,214,779	-		AO353_10115	0.45	-1.8
2,214,779	-		AO353_10115	0.45	+0.4
2,214,779	-		AO353_10115	0.45	-0.9
2,214,779	-		AO353_10115	0.45	+0.5
2,214,779	-		AO353_10115	0.45	-0.2
2,214,779	-		AO353_10115	0.45	+0.1
2,214,779	-		AO353_10115	0.45	-0.9
2,214,779	-		AO353_10115	0.45	+0.6
2,214,779	-		AO353_10115	0.45	-0.1
2,214,779	-		AO353_10115	0.45	-0.0
2,214,779	-		AO353_10115	0.45	-0.1
2,214,779	-		AO353_10115	0.45	+0.4
2,214,779	-		AO353_10115	0.45	-1.1
2,214,779	-		AO353_10115	0.45	-0.4
2,214,779	-		AO353_10115	0.45	-0.2
2,214,779	-		AO353_10115	0.45	-0.6
2,214,779	-		AO353_10115	0.45	+0.2
2,214,779	-		AO353_10115	0.45	-0.6
2,214,779	-		AO353_10115	0.45	+0.8
2,214,779	-		AO353_10115	0.45	-0.1
2,214,779	-		AO353_10115	0.45	-1.7
2,214,780	+		AO353_10115	0.45	+1.4
2,214,780	+		AO353_10115	0.45	+0.4
2,214,780	+		AO353_10115	0.45	-0.0
2,214,780	+		AO353_10115	0.45	-0.9
2,214,780	+		AO353_10115	0.45	-0.3
2,214,780	+		AO353_10115	0.45	+0.4
2,214,781	-		AO353_10115	0.45	+0.1
2,214,781	-		AO353_10115	0.45	-0.4
2,214,781	-		AO353_10115	0.45	-0.6
2,214,781	-		AO353_10115	0.45	+0.8
2,214,781	-		AO353_10115	0.45	+0.5
2,214,781	-		AO353_10115	0.45	-0.8
2,214,805	-		AO353_10115	0.52	-1.0
2,214,985	+				+0.2
2,214,985	+				-1.5
2,214,985	+				+0.4
2,214,985	+				+0.8
2,214,985	+				-0.5
2,214,985	+				+1.4
2,214,986	-				+1.1
2,214,986	-				-0.1
2,214,986	-				+0.5
2,214,986	-				-2.4
2,214,986	-				+0.1
2,214,986	-				-1.1
2,214,986	-				-0.7
2,214,986	-				-1.9
2,214,986	-				-0.9
2,214,986	-				+0.4
2,215,024	+				-1.4
2,215,024	+				+1.4
2,215,024	+				-0.5
2,215,024	+				+0.2
2,215,024	+				+1.1
2,215,024	+				-0.1
2,215,025	-				-0.9
2,215,025	-				+0.8
2,215,025	-				+0.4
2,215,025	-				+1.1
2,215,025	-				-0.6
2,215,025	-				-1.2
2,215,025	-				-0.6
2,215,025	-				-0.8
2,215,055	-				-0.0
2,215,233	-		AO353_10120	0.21	+1.8
2,215,233	-		AO353_10120	0.21	-1.2
2,215,254	+		AO353_10120	0.22	+0.1
2,215,254	+		AO353_10120	0.22	-0.9
2,215,254	+		AO353_10120	0.22	-0.4
2,215,255	-		AO353_10120	0.22	+1.0
2,215,255	-		AO353_10120	0.22	+1.8
2,215,255	-		AO353_10120	0.22	-0.5
2,215,371	+		AO353_10120	0.32	+1.1
2,215,371	+		AO353_10120	0.32	-0.2
2,215,371	+		AO353_10120	0.32	+0.5
2,215,371	+		AO353_10120	0.32	+1.2
2,215,371	+		AO353_10120	0.32	-1.2
2,215,372	-		AO353_10120	0.32	+0.0
2,215,372	-		AO353_10120	0.32	+1.0
2,215,372	-		AO353_10120	0.32	+1.0
2,215,444	+		AO353_10120	0.38	+0.9
2,215,444	+		AO353_10120	0.38	-0.9
2,215,444	+		AO353_10120	0.38	+1.0
2,215,444	+		AO353_10120	0.38	-1.4
2,215,444	+		AO353_10120	0.38	+0.5
2,215,444	+		AO353_10120	0.38	+0.8
2,215,445	-		AO353_10120	0.38	+0.6
2,215,445	-		AO353_10120	0.38	-0.1
2,215,862	+		AO353_10120	0.72	+0.6
2,215,862	+		AO353_10120	0.72	+0.6
2,215,862	+		AO353_10120	0.72	+0.8
2,215,862	+		AO353_10120	0.72	+0.4
2,215,862	+		AO353_10120	0.72	+1.0
2,215,863	-		AO353_10120	0.73	-0.0
2,215,863	-		AO353_10120	0.73	-0.1
2,215,863	-		AO353_10120	0.73	+0.8
2,215,863	-		AO353_10120	0.73	-1.1
2,215,863	-		AO353_10120	0.73	-1.1
2,216,045	-		AO353_10120	0.88	+0.3
2,216,045	-		AO353_10120	0.88	-1.1
2,216,070	+		AO353_10120	0.90	+0.8
2,216,070	+		AO353_10120	0.90	-0.4
2,216,142	+				-0.8
2,216,142	+				+1.5
2,216,142	+				+0.2
2,216,143	-				-1.2
2,216,195	+				-0.6
2,216,195	+				+0.4
2,216,196	-				+2.1
2,216,221	+				+0.5
2,216,222	-				-0.8
2,216,222	-				-0.9
2,216,222	-				-0.2
2,216,259	+				-1.1
2,216,379	+		AO353_10125	0.11	+1.0
2,216,379	+		AO353_10125	0.11	+0.1
2,216,379	+		AO353_10125	0.11	+0.8
2,216,379	+		AO353_10125	0.11	-0.7
2,216,379	+		AO353_10125	0.11	+0.7
2,216,380	-		AO353_10125	0.11	-0.9
2,216,380	-		AO353_10125	0.11	-0.0
2,216,380	-		AO353_10125	0.11	-0.4
2,216,397	+		AO353_10125	0.13	+1.4
2,216,455	+		AO353_10125	0.19	+1.0
2,216,455	+		AO353_10125	0.19	+0.5
2,216,455	+		AO353_10125	0.19	+1.1
2,216,455	+		AO353_10125	0.19	+0.5
2,216,455	+		AO353_10125	0.19	+1.4
2,216,455	+		AO353_10125	0.19	-1.2
2,216,456	-		AO353_10125	0.19	+1.0
2,216,456	-		AO353_10125	0.19	-0.3
2,216,456	-		AO353_10125	0.19	+0.1
2,216,456	-		AO353_10125	0.19	-0.1
2,216,456	-		AO353_10125	0.19	+0.6
2,216,456	-		AO353_10125	0.19	+0.4
2,216,456	-		AO353_10125	0.19	+0.6
2,216,456	-		AO353_10125	0.19	+0.9
2,216,456	-		AO353_10125	0.19	-1.2
2,216,468	+		AO353_10125	0.21	+0.6
2,216,468	+		AO353_10125	0.21	+0.1
2,216,468	+		AO353_10125	0.21	-1.3
2,216,468	+		AO353_10125	0.21	-0.6
2,216,468	+		AO353_10125	0.21	-0.6
2,216,469	-		AO353_10125	0.21	-1.5
2,216,469	-		AO353_10125	0.21	-0.8
2,216,469	-		AO353_10125	0.21	-0.2
2,216,469	-		AO353_10125	0.21	+0.8
2,216,573	+		AO353_10125	0.32	-0.4
2,216,573	+		AO353_10125	0.32	-0.2
2,216,573	+		AO353_10125	0.32	-1.9
2,216,574	-		AO353_10125	0.33	-0.0
2,216,574	-		AO353_10125	0.33	-1.3
2,216,574	-		AO353_10125	0.33	+0.4
2,216,574	-		AO353_10125	0.33	-0.2
2,216,595	+		AO353_10125	0.35	-0.9
2,216,595	+		AO353_10125	0.35	+0.0
2,216,595	+		AO353_10125	0.35	-0.7
2,216,595	+		AO353_10125	0.35	+1.5
2,216,596	-		AO353_10125	0.35	+0.2
2,216,596	-				+1.4
2,216,596	-		AO353_10125	0.35	+0.6
2,216,596	-		AO353_10125	0.35	-1.1
2,216,596	-		AO353_10125	0.35	+0.6
2,216,596	-		AO353_10125	0.35	+0.3
2,216,714	+		AO353_10125	0.48	+0.5
2,216,714	+		AO353_10125	0.48	-0.8
2,216,714	+		AO353_10125	0.48	+3.5
2,216,715	-		AO353_10125	0.48	+0.6
2,216,715	-		AO353_10125	0.48	+0.3
2,216,715	-		AO353_10125	0.48	-0.7
2,216,715	-		AO353_10125	0.48	+1.4
2,216,715	-		AO353_10125	0.48	+0.1
2,216,715	-		AO353_10125	0.48	-0.4
2,216,758	+		AO353_10125	0.53	-1.1
2,216,758	+		AO353_10125	0.53	-0.6
2,216,758	+		AO353_10125	0.53	-0.1
2,216,758	+		AO353_10125	0.53	-0.9
2,216,758	+		AO353_10125	0.53	-1.0
2,216,758	+		AO353_10125	0.53	-0.1
2,216,759	-		AO353_10125	0.53	+0.9
2,216,759	-		AO353_10125	0.53	+1.0
2,216,759	-		AO353_10125	0.53	-1.1
2,216,759	-		AO353_10125	0.53	-1.4
2,216,759	-		AO353_10125	0.53	+0.1
2,216,759	-		AO353_10125	0.53	+0.6
2,216,759	-		AO353_10125	0.53	-0.6
2,216,759	-		AO353_10125	0.53	+1.5
2,216,759	-		AO353_10125	0.53	+0.2
2,216,903	+		AO353_10125	0.69	-1.0
2,216,903	+		AO353_10125	0.69	-1.1
2,216,903	+		AO353_10125	0.69	+1.4
2,216,903	+		AO353_10125	0.69	-1.2
2,216,903	+		AO353_10125	0.69	+0.1
2,216,903	+		AO353_10125	0.69	+1.1
2,216,903	+		AO353_10125	0.69	-0.4
2,216,904	-		AO353_10125	0.69	+1.1
2,216,904	-		AO353_10125	0.69	+1.0
2,216,904	-		AO353_10125	0.69	-1.2
2,216,904	-		AO353_10125	0.69	+0.5
2,216,904	-		AO353_10125	0.69	+0.8
2,216,904	-		AO353_10125	0.69	+1.7
2,216,979	+		AO353_10125	0.78	-1.4
2,216,979	+		AO353_10125	0.78	+0.2
2,216,980	-		AO353_10125	0.78	-0.1