Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09480

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
2,079,902	+				+1.4
2,079,903	-		AO353_09465	0.47	+0.8
2,079,916	+		AO353_09465	0.50	-0.7
2,079,917	-		AO353_09465	0.51	+0.4
2,079,917	-		AO353_09465	0.51	+0.6
2,079,917	-		AO353_09465	0.51	+0.0
2,079,917	-		AO353_09465	0.51	-1.1
2,079,946	+		AO353_09465	0.59	-1.6
2,080,003	-		AO353_09465	0.75	-0.0
2,080,004	+		AO353_09465	0.75	-0.6
2,080,004	+		AO353_09465	0.75	-1.1
2,080,004	+		AO353_09465	0.75	-2.0
2,080,004	+		AO353_09465	0.75	-0.2
2,080,004	+		AO353_09465	0.75	+0.2
2,080,004	+		AO353_09465	0.75	-1.1
2,080,004	+		AO353_09465	0.75	-0.0
2,080,004	+		AO353_09465	0.75	-1.1
2,080,004	+		AO353_09465	0.75	-2.3
2,080,004	+		AO353_09465	0.75	+0.4
2,080,005	-		AO353_09465	0.76	-0.5
2,080,005	-		AO353_09465	0.76	-0.8
2,080,005	-		AO353_09465	0.76	+0.5
2,080,005	-		AO353_09465	0.76	-0.5
2,080,005	-		AO353_09465	0.76	-0.0
2,080,005	-		AO353_09465	0.76	+0.5
2,080,005	-		AO353_09465	0.76	+0.4
2,080,057	-				+0.5
2,080,099	+				+2.5
2,080,100	-				-0.7
2,080,286	-		AO353_09470	0.31	+0.0
2,080,286	-		AO353_09470	0.31	+1.2
2,080,413	+		AO353_09470	0.61	+0.4
2,080,413	+		AO353_09470	0.61	-0.2
2,080,414	-		AO353_09470	0.61	-0.4
2,080,414	-		AO353_09470	0.61	+0.8
2,080,414	-		AO353_09470	0.61	-1.2
2,080,414	-		AO353_09470	0.61	-1.0
2,080,414	-		AO353_09470	0.61	-0.4
2,080,415	+		AO353_09470	0.61	+2.4
2,080,416	-		AO353_09470	0.61	-0.4
2,080,416	-		AO353_09470	0.61	+0.1
2,080,417	+		AO353_09470	0.62	+2.7
2,080,417	+		AO353_09470	0.62	-0.4
2,080,417	+		AO353_09470	0.62	-0.6
2,080,417	+		AO353_09470	0.62	-2.1
2,080,417	+		AO353_09470	0.62	-0.8
2,080,417	+		AO353_09470	0.62	-0.0
2,080,417	+		AO353_09470	0.62	+0.0
2,080,417	+		AO353_09470	0.62	+2.7
2,080,418	-		AO353_09470	0.62	-0.3
2,080,418	-		AO353_09470	0.62	-0.8
2,080,418	-		AO353_09470	0.62	-0.1
2,080,418	-		AO353_09470	0.62	+0.8
2,080,418	-		AO353_09470	0.62	+0.1
2,080,418	-		AO353_09470	0.62	-0.1
2,080,429	+		AO353_09470	0.64	+0.1
2,080,429	+		AO353_09470	0.64	-0.9
2,080,429	+		AO353_09470	0.64	-0.1
2,080,429	+		AO353_09470	0.64	-2.2
2,080,429	+		AO353_09470	0.64	-1.6
2,080,430	-		AO353_09470	0.65	-0.5
2,080,430	-		AO353_09470	0.65	+0.8
2,080,430	-		AO353_09470	0.65	-0.1
2,080,430	-		AO353_09470	0.65	-1.0
2,080,430	-		AO353_09470	0.65	-0.2
2,080,505	+		AO353_09470	0.82	-1.0
2,080,506	-		AO353_09470	0.82	+0.4
2,080,506	-		AO353_09470	0.82	+0.9
2,080,519	+		AO353_09470	0.85	+0.7
2,080,570	+				+1.1
2,080,570	+				+1.4
2,080,570	+				-0.7
2,080,570	+				+0.4
2,080,571	-				+0.9
2,080,571	-				-0.6
2,080,571	-				+0.1
2,080,571	-				+1.4
2,080,571	-				-1.0
2,080,571	-				+0.7
2,080,574	+				-1.0
2,080,574	+				+1.3
2,080,574	+				-0.2
2,080,574	+				+0.0
2,080,574	+				-0.8
2,080,574	+				-0.3
2,080,574	+				-1.1
2,080,574	+				+0.6
2,080,574	+				-0.2
2,080,574	+				-0.3
2,080,575	-				-0.0
2,080,575	-				+0.0
2,080,575	-				+0.4
2,080,575	-				+1.5
2,080,575	-				-0.9
2,080,575	-				-1.3
2,080,575	-				-0.3
2,080,575	-				-1.3
2,080,575	-				-0.9
2,080,575	-				-0.5
2,080,575	-				+0.4
2,080,588	+				+1.5
2,080,589	-				+0.0
2,080,592	-				-0.8
2,080,592	-				-0.9
2,080,592	-				-1.8
2,080,592	-				+0.9
2,080,592	-				+0.6
2,080,599	+		AO353_09475	0.10	+0.8
2,080,599	+		AO353_09475	0.10	-0.6
2,080,602	+		AO353_09475	0.11	+0.4
2,080,602	+		AO353_09475	0.11	-0.0
2,080,637	+		AO353_09475	0.27	+0.4
2,080,638	-		AO353_09475	0.28	+0.1
2,080,767	+		AO353_09475	0.87	-0.3
2,080,768	-		AO353_09475	0.87	-1.6
2,080,768	-		AO353_09475	0.87	-0.6
2,080,768	-		AO353_09475	0.87	+1.1
2,080,775	+				+1.4
2,080,775	+				-0.9
2,080,775	+				-0.7
2,080,775	+				-0.1
2,080,776	-				+1.2
2,080,787	+				-1.1
2,080,787	+				+2.2
2,080,787	+				+0.4
2,080,788	-				+0.4
2,080,788	-				-0.2
2,080,788	-				+0.2
2,080,788	-				+0.8
2,080,789	+				+0.1
2,080,789	+				+0.9
2,080,789	+				-1.0
2,080,790	-				-0.0
2,080,790	-				-0.1
2,080,790	-				-1.2
2,080,790	-				-0.8
2,080,790	-				-0.4
2,080,818	+				+1.4
2,080,818	+				+0.9
2,080,818	+				+1.4
2,080,818	+				+1.7
2,080,819	-				+1.0
2,080,819	-				-1.2
2,080,819	-				-0.6
2,080,819	-				+1.4
2,080,819	-				-0.8
2,080,819	-				-0.6
2,080,819	-				-0.1
2,080,820	+				+0.1
2,080,820	+				-1.5
2,080,820	+				+0.9
2,080,821	-				+0.2
2,080,821	-				+1.0
2,080,821	-				+1.8
2,080,821	-				-0.2
2,080,827	+				-0.6
2,080,827	+				+0.4
2,080,827	+				+0.8
2,080,827	+				+1.9
2,080,827	+				+0.9
2,080,827	+				+0.6
2,080,828	-				+0.2
2,080,828	-				-1.6
2,080,828	-				+0.4
2,080,828	-				-0.6
2,080,830	+				+2.1
2,080,840	+				+0.4
2,080,841	-				+0.8
2,080,877	+				-1.3
2,080,877	+				-1.0
2,080,878	-				-1.4
2,080,939	+		AO353_09480	0.14	-1.2
2,080,940	-		AO353_09480	0.14	-0.6
2,080,949	+		AO353_09480	0.16	-0.0
2,080,949	+		AO353_09480	0.16	-2.0
2,080,949	+		AO353_09480	0.16	+0.4
2,080,949	+		AO353_09480	0.16	+0.1
2,081,025	+		AO353_09480	0.36	-1.1
2,081,025	+		AO353_09480	0.36	-0.3
2,081,025	+		AO353_09480	0.36	-1.1
2,081,025	+		AO353_09480	0.36	+0.3
2,081,026	-		AO353_09480	0.36	+0.8
2,081,026	-		AO353_09480	0.36	-1.5
2,081,026	-		AO353_09480	0.36	+1.5
2,081,026	-		AO353_09480	0.36	-1.8
2,081,061	+		AO353_09480	0.46	-0.5
2,081,061	+		AO353_09480	0.46	-1.2
2,081,061	+		AO353_09480	0.46	+0.0
2,081,062	-		AO353_09480	0.46	-0.8
2,081,062	-		AO353_09480	0.46	-0.9
2,081,062	-		AO353_09480	0.46	-0.4
2,081,062	-		AO353_09480	0.46	-0.4
2,081,187	+		AO353_09480	0.78	+0.7
2,081,187	+		AO353_09480	0.78	+1.4
2,081,187	+		AO353_09480	0.78	-0.0
2,081,187	+		AO353_09480	0.78	+0.1
2,081,187	+		AO353_09480	0.78	+1.1
2,081,187	+		AO353_09480	0.78	-1.1
2,081,187	+		AO353_09480	0.78	+0.1
2,081,188	-		AO353_09480	0.79	+1.4
2,081,188	-		AO353_09480	0.79	+0.0
2,081,188	-		AO353_09480	0.79	+0.8
2,081,188	-		AO353_09480	0.79	-1.2
2,081,188	-		AO353_09480	0.79	-1.5
2,081,188	-		AO353_09480	0.79	+0.1
2,081,188	-		AO353_09480	0.79	-0.5
2,081,202	+		AO353_09480	0.82	+0.6
2,081,202	+		AO353_09480	0.82	+1.0
2,081,202	+		AO353_09480	0.82	+0.1
2,081,202	+		AO353_09480	0.82	-0.8
2,081,203	-		AO353_09480	0.83	-0.5
2,081,224	+		AO353_09480	0.88	-2.7
2,081,263	+				-0.6
2,081,263	+				-0.8
2,081,263	+				-1.2
2,081,263	+				+0.1
2,081,263	+				-0.6
2,081,263	+				+2.5
2,081,263	+				-1.2
2,081,263	+				+0.8
2,081,278	+				-0.2
2,081,278	+				+0.2
2,081,278	+				-1.7
2,081,278	+				+0.2
2,081,278	+				-1.2
2,081,278	+				-0.8
2,081,278	+				-0.1
2,081,279	-				+1.6
2,081,279	-				+0.8
2,081,279	-				-0.6
2,081,281	+				-0.5
2,081,281	+				-0.9
2,081,282	-				-1.2
2,081,282	-				-0.5
2,081,282	-				-2.5
2,081,282	-				+0.8
2,081,335	+				-2.5
2,081,359	+				-0.4
2,081,359	+				-0.8
2,081,360	-				+0.6
2,081,360	-				-0.9
2,081,360	-				+0.4
2,081,387	+		AO353_09485	0.11	-0.6
2,081,387	+		AO353_09485	0.11	-1.0
2,081,387	+		AO353_09485	0.11	-1.0
2,081,387	+		AO353_09485	0.11	-0.3
2,081,387	+		AO353_09485	0.11	+1.2
2,081,387	+		AO353_09485	0.11	+1.1
2,081,388	-		AO353_09485	0.12	+2.4
2,081,388	-		AO353_09485	0.12	+1.4
2,081,388	-		AO353_09485	0.12	-1.3
2,081,388	-		AO353_09485	0.12	-0.2
2,081,388	-		AO353_09485	0.12	-1.8
2,081,402	+		AO353_09485	0.18	-1.8
2,081,403	-		AO353_09485	0.19	+0.1
2,081,403	-		AO353_09485	0.19	-0.1
2,081,403	-		AO353_09485	0.19	-1.0
2,081,403	-		AO353_09485	0.19	+0.0
2,081,552	+		AO353_09485	0.87	-1.2
2,081,553	-		AO353_09485	0.87	+0.7
2,081,560	+				-0.4
2,081,560	+				-0.7
2,081,605	+				+0.4
2,081,605	+				+0.6
2,081,605	+				-2.0
2,081,606	-				-1.6
2,081,606	-				+1.2
2,081,606	-				+0.8
2,081,628	-				+0.2
2,081,692	+		AO353_09490	0.25	+0.9
2,081,759	-		AO353_09490	0.40	+0.0
2,081,760	+		AO353_09490	0.40	-0.0
2,081,760	+		AO353_09490	0.40	-1.2
2,081,760	+		AO353_09490	0.40	-2.0
2,081,813	-		AO353_09490	0.53	+0.4
2,081,813	-		AO353_09490	0.53	-1.0
2,081,844	+		AO353_09490	0.60	+0.6
2,081,845	-		AO353_09490	0.60	+0.6
2,081,866	+		AO353_09490	0.65	-0.9
2,082,110	-		AO353_09495	0.24	+0.7
2,082,110	-		AO353_09495	0.24	+0.4
2,082,130	-		AO353_09495	0.29	+0.0
2,082,150	-		AO353_09495	0.34	-0.2
2,082,168	+		AO353_09495	0.39	+1.6
2,082,224	+		AO353_09495	0.53	-0.0
2,082,225	-		AO353_09495	0.54	+1.9
2,082,225	-		AO353_09495	0.54	-0.6
2,082,235	-		AO353_09495	0.56	+0.2
2,082,246	+		AO353_09495	0.59	+0.9
2,082,247	-		AO353_09495	0.59	+0.1
2,082,258	+		AO353_09495	0.62	+0.9
2,082,258	+		AO353_09495	0.62	+1.5
2,082,258	+		AO353_09495	0.62	-0.5
2,082,259	-		AO353_09495	0.63	-0.2