Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09165

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
2,011,621	-		AO353_09155	0.80	+0.3
2,011,621	-		AO353_09155	0.80	-1.5
2,011,684	+		AO353_09155	0.85	+1.8
2,011,684	+		AO353_09155	0.85	+1.1
2,011,685	-		AO353_09155	0.85	+0.2
2,011,726	-		AO353_09155	0.88	+1.1
2,011,799	+				-0.4
2,011,799	+				+0.6
2,011,824	+				-0.3
2,011,824	+				+0.6
2,011,824	+				+1.7
2,011,824	+				+0.3
2,011,824	+				-0.3
2,011,824	+				+1.0
2,011,824	+				+2.3
2,011,825	-				+1.7
2,011,825	-				+0.6
2,011,827	+				+1.1
2,011,827	+				+1.6
2,011,827	+				+0.1
2,011,828	-				+0.7
2,011,828	-				+1.9
2,011,828	-				+0.6
2,011,828	-				+1.3
2,011,828	-				-0.5
2,011,828	-				+0.3
2,011,899	+				+2.5
2,011,900	-				+0.4
2,011,941	+				+0.6
2,011,972	+				-0.4
2,011,973	-				-0.7
2,011,981	-				+0.7
2,012,008	-				-0.6
2,012,044	+				+0.6
2,012,044	+				+1.2
2,012,044	+				-0.5
2,012,044	+				+1.3
2,012,044	+				+1.0
2,012,044	+				-0.6
2,012,044	+				-0.5
2,012,044	+				+0.4
2,012,080	+				-1.3
2,012,080	+				+0.5
2,012,210	+		AO353_09160	0.36	-2.0
2,012,210	+		AO353_09160	0.36	+0.9
2,012,210	+		AO353_09160	0.36	-0.3
2,012,211	-		AO353_09160	0.36	+0.5
2,012,211	-		AO353_09160	0.36	-1.7
2,012,211	-		AO353_09160	0.36	+1.5
2,012,211	-		AO353_09160	0.36	-1.4
2,012,211	-		AO353_09160	0.36	-1.1
2,012,256	+		AO353_09160	0.46	+1.1
2,012,256	+		AO353_09160	0.46	-0.6
2,012,256	+		AO353_09160	0.46	-1.8
2,012,257	-		AO353_09160	0.46	+0.0
2,012,279	+		AO353_09160	0.50	-1.0
2,012,279	+		AO353_09160	0.50	+0.6
2,012,279	+		AO353_09160	0.50	-2.3
2,012,280	-		AO353_09160	0.51	+0.5
2,012,280	-		AO353_09160	0.51	+1.9
2,012,280	-		AO353_09160	0.51	+0.7
2,012,280	-		AO353_09160	0.51	+0.7
2,012,280	-		AO353_09160	0.51	-0.3
2,012,280	-		AO353_09160	0.51	+0.9
2,012,280	-		AO353_09160	0.51	-1.0
2,012,280	-		AO353_09160	0.51	+0.3
2,012,280	-		AO353_09160	0.51	-0.0
2,012,293	+		AO353_09160	0.53	-0.9
2,012,337	+		AO353_09160	0.62	-1.5
2,012,337	+		AO353_09160	0.62	+0.7
2,012,337	+		AO353_09160	0.62	+1.3
2,012,337	+		AO353_09160	0.62	-0.3
2,012,338	-		AO353_09160	0.62	-1.1
2,012,372	+		AO353_09160	0.69	+0.1
2,012,372	+		AO353_09160	0.69	-0.7
2,012,372	+		AO353_09160	0.69	+1.3
2,012,372	+		AO353_09160	0.69	+1.0
2,012,373	-		AO353_09160	0.70	-1.0
2,012,468	+		AO353_09160	0.89	+1.2
2,012,468	+		AO353_09160	0.89	+2.2
2,012,468	+		AO353_09160	0.89	+0.6
2,012,468	+		AO353_09160	0.89	+0.3
2,012,468	+		AO353_09160	0.89	+0.8
2,012,468	+		AO353_09160	0.89	+1.8
2,012,468	+		AO353_09160	0.89	-0.3
2,012,468	+		AO353_09160	0.89	+0.7
2,012,468	+		AO353_09160	0.89	+1.3
2,012,468	+		AO353_09160	0.89	+0.5
2,012,468	+		AO353_09160	0.89	+0.5
2,012,468	+		AO353_09160	0.89	-0.3
2,012,468	+		AO353_09160	0.89	-1.7
2,012,468	+		AO353_09160	0.89	-0.8
2,012,468	+		AO353_09160	0.89	+0.2
2,012,468	+		AO353_09160	0.89	-1.8
2,012,468	+		AO353_09160	0.89	-0.3
2,012,468	+		AO353_09160	0.89	-0.4
2,012,468	+		AO353_09160	0.89	+0.3
2,012,468	+		AO353_09160	0.89	-0.5
2,012,468	+		AO353_09160	0.89	+0.3
2,012,468	+		AO353_09160	0.89	-0.8
2,012,468	+		AO353_09160	0.89	+0.7
2,012,468	+		AO353_09160	0.89	+0.1
2,012,468	+		AO353_09160	0.89	-0.7
2,012,468	+		AO353_09160	0.89	-1.7
2,012,468	+		AO353_09160	0.89	+1.3
2,012,468	+		AO353_09160	0.89	+1.6
2,012,468	+		AO353_09160	0.89	+0.3
2,012,468	+		AO353_09160	0.89	+1.3
2,012,468	+		AO353_09160	0.89	+1.1
2,012,468	+		AO353_09160	0.89	-0.7
2,012,469	-		AO353_09160	0.89	-1.5
2,012,469	-		AO353_09160	0.89	+1.1
2,012,469	-		AO353_09160	0.89	+1.1
2,012,469	-		AO353_09160	0.89	-1.8
2,012,469	-		AO353_09160	0.89	+0.6
2,012,469	-		AO353_09160	0.89	-0.1
2,012,469	-		AO353_09160	0.89	-0.2
2,012,469	-		AO353_09160	0.89	-2.6
2,012,469	-		AO353_09160	0.89	+0.6
2,012,469	-		AO353_09160	0.89	+1.7
2,012,469	-		AO353_09160	0.89	+1.0
2,012,469	-		AO353_09160	0.89	-0.7
2,012,469	-		AO353_09160	0.89	+0.3
2,012,469	-		AO353_09160	0.89	+0.6
2,012,469	-		AO353_09160	0.89	+0.6
2,012,469	-		AO353_09160	0.89	-0.5
2,012,469	-		AO353_09160	0.89	-0.5
2,012,469	-		AO353_09160	0.89	+0.3
2,012,469	-		AO353_09160	0.89	+1.1
2,012,469	-		AO353_09160	0.89	+0.3
2,012,469	-		AO353_09160	0.89	+0.4
2,012,469	-		AO353_09160	0.89	+2.0
2,012,469	-		AO353_09160	0.89	-0.7
2,012,469	-		AO353_09160	0.89	-0.1
2,012,469	-		AO353_09160	0.89	+0.3
2,012,469	-		AO353_09160	0.89	+2.1
2,012,469	-		AO353_09160	0.89	-2.8
2,012,469	-		AO353_09160	0.89	-0.4
2,012,469	-		AO353_09160	0.89	+2.1
2,012,470	+		AO353_09160	0.89	+0.3
2,012,470	+		AO353_09160	0.89	-2.5
2,012,471	-		AO353_09160	0.90	-0.1
2,012,471	-		AO353_09160	0.90	+0.8
2,012,553	+				+0.3
2,012,553	+				+0.7
2,012,553	+				-1.4
2,012,553	+				+1.0
2,012,553	+				-0.1
2,012,553	+				-1.0
2,012,553	+				+2.0
2,012,553	+				+1.9
2,012,553	+				-1.1
2,012,554	-				+0.7
2,012,554	-				+0.3
2,012,554	-				+0.6
2,012,554	-				+0.9
2,012,561	+				-2.0
2,012,561	+				-0.4
2,012,561	+				-0.3
2,012,562	-				-0.3
2,012,562	-				+0.1
2,012,562	-				-0.2
2,012,562	-				-1.0
2,012,584	+				+0.9
2,012,584	+				+0.9
2,012,584	+				+1.1
2,012,614	+				+2.3
2,012,614	+				+0.3
2,012,614	+				+0.9
2,012,614	+				-1.1
2,012,614	+				+1.0
2,012,614	+				-0.9
2,012,614	+				+1.3
2,012,614	+				-0.5
2,012,614	+				+0.0
2,012,614	+				+3.8
2,012,614	+				+0.7
2,012,614	+				-0.5
2,012,614	+				+0.3
2,012,614	+				-1.4
2,012,614	+				+0.2
2,012,614	+				-1.5
2,012,614	+				-0.8
2,012,614	+				-2.9
2,012,614	+				+1.8
2,012,614	+				-0.7
2,012,614	+				+0.9
2,012,614	+				-0.0
2,012,614	+				-0.5
2,012,614	+				-0.1
2,012,615	-				+1.2
2,012,615	-				+0.1
2,012,615	-				+0.0
2,012,615	-				-0.1
2,012,615	-				+0.3
2,012,615	-				+1.1
2,012,615	-				-1.5
2,012,615	-				-1.1
2,012,615	-				-0.5
2,012,615	-				+0.6
2,012,615	-				+0.9
2,012,615	-				+1.0
2,012,615	-				-0.6
2,012,615	-				+0.3
2,012,615	-				+0.7
2,012,615	-				-0.4
2,012,615	-				-0.3
2,012,615	-				-1.0
2,012,615	-				+1.0
2,012,615	-				-0.3
2,012,615	-				-1.3
2,012,615	-				+0.3
2,012,615	-				-1.3
2,012,615	-				-0.3
2,012,615	-				+2.6
2,012,615	-				+0.7
2,012,615	-				-0.4
2,012,615	-				+0.4
2,012,615	-				-1.8
2,012,731	+		AO353_09165	0.42	+0.5
2,012,731	+		AO353_09165	0.42	+1.6
2,012,731	+		AO353_09165	0.42	-1.3
2,012,731	+		AO353_09165	0.42	+0.7
2,012,732	-		AO353_09165	0.42	+0.3
2,012,732	-		AO353_09165	0.42	+1.9
2,012,732	-		AO353_09165	0.42	+0.9
2,012,807	+		AO353_09165	0.63	+0.6
2,012,808	-		AO353_09165	0.64	+1.1
2,012,840	+		AO353_09165	0.73	+0.6
2,012,840	+		AO353_09165	0.73	+0.6
2,012,840	+		AO353_09165	0.73	+0.7
2,012,840	+		AO353_09165	0.73	-0.7
2,012,840	+		AO353_09165	0.73	-0.9
2,012,841	-		AO353_09165	0.73	-0.7
2,012,841	-		AO353_09165	0.73	-0.1
2,012,841	-		AO353_09165	0.73	+0.4
2,012,841	-		AO353_09165	0.73	-0.0
2,012,979	+				+0.3
2,012,980	-				+0.0
2,013,040	+				+1.9
2,013,040	+				-0.5
2,013,040	+				-0.5
2,013,040	+				+0.2
2,013,041	-				+0.3
2,013,041	-				-0.5
2,013,059	+				-0.7
2,013,059	+				+0.4
2,013,059	+				-0.0
2,013,060	-				+1.9
2,013,060	-				+0.9
2,013,060	-				+0.9
2,013,060	-				+0.5
2,013,060	-				-0.3
2,013,060	-				-1.0
2,013,127	+				+1.3
2,013,127	+				-1.3
2,013,127	+				-0.8
2,013,128	-				+0.1
2,013,128	-				+0.3
2,013,128	-				+0.8
2,013,128	-				-0.4
2,013,128	-				-1.6
2,013,137	+				+0.7
2,013,137	+				-0.3
2,013,137	+				+0.5
2,013,137	+				-2.6
2,013,137	+				-1.0
2,013,137	+				+0.8
2,013,137	+				-1.1
2,013,137	+				-1.8
2,013,137	+				+0.5
2,013,137	+				+0.9
2,013,138	-				+0.0
2,013,138	-				+1.7
2,013,138	-				-0.3
2,013,138	-				-0.5
2,013,138	-				-1.2
2,013,138	-				+0.6
2,013,138	-				-0.5
2,013,138	-				-0.3
2,013,138	-				+1.2
2,013,138	-				+0.0
2,013,138	-				-0.4
2,013,140	+				-0.3
2,013,140	+				-2.0
2,013,140	+				+0.0
2,013,140	+				-0.4
2,013,140	+				-1.0
2,013,140	+				-0.4
2,013,140	+				-0.8
2,013,486	-		AO353_09170	0.30	-0.7
2,013,623	+		AO353_09170	0.41	+0.9
2,013,624	-		AO353_09170	0.41	+1.3
2,013,624	-		AO353_09170	0.41	+1.3
2,013,827	+		AO353_09170	0.56	-0.3
2,013,828	-		AO353_09170	0.56	-0.9
2,013,828	-		AO353_09170	0.56	+1.3
2,013,828	-		AO353_09170	0.56	-0.8
2,013,828	-		AO353_09170	0.56	+2.1
2,013,842	-		AO353_09170	0.58	+0.2
2,013,881	+		AO353_09170	0.61	+0.7
2,013,881	+		AO353_09170	0.61	-0.3
2,013,881	+		AO353_09170	0.61	+1.6
2,013,881	+		AO353_09170	0.61	-0.7
2,013,881	+		AO353_09170	0.61	+0.6
2,013,881	+		AO353_09170	0.61	-2.6
2,013,881	+		AO353_09170	0.61	-1.5
2,013,881	+		AO353_09170	0.61	-1.6
2,013,881	+		AO353_09170	0.61	+0.2
2,013,881	+		AO353_09170	0.61	-0.3
2,013,881	+		AO353_09170	0.61	+1.0
2,013,881	+		AO353_09170	0.61	+0.7
2,013,881	+		AO353_09170	0.61	+0.3
2,013,882	-		AO353_09170	0.61	+2.5
2,013,882	-		AO353_09170	0.61	-0.2
2,013,882	-		AO353_09170	0.61	+2.1
2,013,882	-		AO353_09170	0.61	+1.7
2,013,882	-		AO353_09170	0.61	-1.8
2,013,882	-		AO353_09170	0.61	-1.0
2,013,882	-		AO353_09170	0.61	-1.3
2,013,882	-		AO353_09170	0.61	-0.5
2,013,882	-		AO353_09170	0.61	-0.1
2,013,927	+		AO353_09170	0.64	+0.3
2,013,928	-		AO353_09170	0.64	+0.8
2,013,928	-		AO353_09170	0.64	+0.2