Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08270

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
1,817,209	+		AO353_08260	0.86	+2.3
1,817,209	+		AO353_08260	0.86	-0.3
1,817,209	+		AO353_08260	0.86	-0.7
1,817,209	+		AO353_08260	0.86	+1.3
1,817,209	+		AO353_08260	0.86	-0.7
1,817,209	+		AO353_08260	0.86	-0.6
1,817,209	+		AO353_08260	0.86	-0.7
1,817,209	+		AO353_08260	0.86	+0.4
1,817,210	-		AO353_08260	0.86	-0.4
1,817,210	-		AO353_08260	0.86	+0.2
1,817,210	-		AO353_08260	0.86	-0.3
1,817,210	-		AO353_08260	0.86	+1.6
1,817,210	-		AO353_08260	0.86	+0.3
1,817,210	-		AO353_08260	0.86	+0.0
1,817,210	-		AO353_08260	0.86	+0.7
1,817,210	-		AO353_08260	0.86	-1.3
1,817,211	+		AO353_08260	0.86	+1.3
1,817,211	+		AO353_08260	0.86	-0.6
1,817,212	-		AO353_08260	0.87	+0.1
1,817,212	-		AO353_08260	0.87	+0.7
1,817,212	-		AO353_08260	0.87	+1.1
1,817,212	-		AO353_08260	0.87	+0.5
1,817,212	-		AO353_08260	0.87	+1.0
1,817,212	-		AO353_08260	0.87	+0.7
1,817,212	-		AO353_08260	0.87	-0.4
1,817,212	-		AO353_08260	0.87	+0.9
1,817,227	+		AO353_08260	0.88	+0.7
1,817,227	+		AO353_08260	0.88	+0.9
1,817,227	+		AO353_08260	0.88	-1.6
1,817,228	-		AO353_08260	0.88	-1.7
1,817,228	-		AO353_08260	0.88	-0.7
1,817,228	-		AO353_08260	0.88	-0.3
1,817,228	-		AO353_08260	0.88	+1.8
1,817,228	-		AO353_08260	0.88	-0.6
1,817,411	-				+1.3
1,817,411	-				-0.7
1,817,448	-				-0.5
1,817,586	+		AO353_08265	0.28	-0.4
1,817,586	+		AO353_08265	0.28	+0.2
1,817,586	+		AO353_08265	0.28	+2.2
1,817,586	+		AO353_08265	0.28	+2.1
1,817,587	-		AO353_08265	0.28	+0.3
1,817,587	-		AO353_08265	0.28	+2.0
1,817,587	-		AO353_08265	0.28	+0.6
1,817,587	-		AO353_08265	0.28	+0.0
1,817,587	-		AO353_08265	0.28	+1.3
1,817,802	+		AO353_08265	0.63	-0.5
1,817,803	-		AO353_08265	0.63	-0.3
1,817,803	-		AO353_08265	0.63	-1.8
1,817,803	-		AO353_08265	0.63	-0.3
1,817,863	+		AO353_08265	0.73	-0.3
1,817,863	+		AO353_08265	0.73	+0.8
1,817,863	+		AO353_08265	0.73	+1.7
1,817,863	+		AO353_08265	0.73	-1.0
1,817,863	+		AO353_08265	0.73	+1.1
1,817,863	+		AO353_08265	0.73	+0.5
1,817,863	+		AO353_08265	0.73	-1.8
1,817,864	-		AO353_08265	0.73	+1.1
1,817,864	-		AO353_08265	0.73	+0.1
1,817,864	-		AO353_08265	0.73	-1.8
1,817,864	-		AO353_08265	0.73	+1.3
1,817,864	-		AO353_08265	0.73	+0.8
1,817,904	+		AO353_08265	0.80	-0.8
1,817,904	+		AO353_08265	0.80	+0.3
1,817,905	-		AO353_08265	0.80	+1.3
1,817,905	-		AO353_08265	0.80	+0.0
1,817,905	-		AO353_08265	0.80	-0.7
1,817,989	-				-1.6
1,817,989	-				+2.9
1,817,991	+				+0.5
1,817,991	+				-1.5
1,817,992	-				-0.7
1,818,008	+				-1.0
1,818,009	-				+0.3
1,818,009	-				+0.3
1,818,107	+				+1.1
1,818,107	+				-0.1
1,818,107	+				+0.6
1,818,108	-				-0.7
1,818,108	-				-0.7
1,818,108	-				-0.8
1,818,108	-				+1.9
1,818,330	+		AO353_08270	0.23	+1.3
1,818,330	+		AO353_08270	0.23	+0.3
1,818,330	+		AO353_08270	0.23	-0.8
1,818,330	+		AO353_08270	0.23	-1.6
1,818,330	+		AO353_08270	0.23	-0.4
1,818,330	+		AO353_08270	0.23	+0.0
1,818,330	+		AO353_08270	0.23	+0.7
1,818,330	+		AO353_08270	0.23	-0.8
1,818,330	+		AO353_08270	0.23	+0.8
1,818,331	-		AO353_08270	0.23	-0.7
1,818,331	-		AO353_08270	0.23	+0.7
1,818,331	-		AO353_08270	0.23	-0.5
1,818,331	-		AO353_08270	0.23	+0.3
1,818,331	-		AO353_08270	0.23	+1.3
1,818,331	-		AO353_08270	0.23	-0.1
1,818,432	+		AO353_08270	0.33	+0.3
1,818,432	+		AO353_08270	0.33	-1.0
1,818,433	-		AO353_08270	0.33	+0.1
1,818,433	-		AO353_08270	0.33	+0.0
1,818,433	-		AO353_08270	0.33	-0.0
1,818,433	-		AO353_08270	0.33	-0.4
1,818,433	-		AO353_08270	0.33	+0.3
1,818,660	+		AO353_08270	0.56	+0.6
1,818,660	+		AO353_08270	0.56	+1.6
1,818,660	+		AO353_08270	0.56	+1.3
1,818,660	+		AO353_08270	0.56	-0.1
1,818,660	+		AO353_08270	0.56	+0.1
1,818,660	+		AO353_08270	0.56	+0.7
1,818,660	+		AO353_08270	0.56	-0.5
1,818,660	+		AO353_08270	0.56	-0.4
1,818,660	+		AO353_08270	0.56	+0.1
1,818,660	+		AO353_08270	0.56	+0.8
1,818,660	+		AO353_08270	0.56	+1.0
1,818,661	-		AO353_08270	0.56	-1.8
1,818,661	-		AO353_08270	0.56	-1.0
1,818,661	-		AO353_08270	0.56	+1.3
1,818,661	-		AO353_08270	0.56	+1.3
1,818,661	-		AO353_08270	0.56	-0.8
1,818,661	-		AO353_08270	0.56	+1.3
1,818,661	-		AO353_08270	0.56	-1.7
1,818,661	-		AO353_08270	0.56	-1.0
1,818,661	-		AO353_08270	0.56	+1.9
1,818,661	-		AO353_08270	0.56	+1.3
1,818,693	+		AO353_08270	0.59	+0.7
1,818,693	+		AO353_08270	0.59	+1.6
1,818,693	+		AO353_08270	0.59	-0.2
1,818,693	+		AO353_08270	0.59	-0.5
1,818,693	+		AO353_08270	0.59	+0.3
1,818,693	+		AO353_08270	0.59	+0.5
1,818,693	+		AO353_08270	0.59	-0.3
1,818,693	+		AO353_08270	0.59	+0.5
1,818,693	+		AO353_08270	0.59	+0.7
1,818,693	+		AO353_08270	0.59	-0.7
1,818,693	+		AO353_08270	0.59	+2.9
1,818,694	-		AO353_08270	0.59	+0.4
1,818,694	-		AO353_08270	0.59	+1.2
1,818,694	-		AO353_08270	0.59	-0.2
1,818,694	-		AO353_08270	0.59	+2.9
1,818,694	-		AO353_08270	0.59	+0.2
1,818,694	-		AO353_08270	0.59	+0.5
1,818,694	-		AO353_08270	0.59	-0.2
1,818,694	-		AO353_08270	0.59	-0.1
1,818,694	-		AO353_08270	0.59	-2.3
1,818,849	+		AO353_08270	0.75	-0.3
1,818,849	+		AO353_08270	0.75	+2.2
1,818,849	+		AO353_08270	0.75	+0.2
1,818,849	+		AO353_08270	0.75	+1.5
1,818,849	+		AO353_08270	0.75	-0.9
1,818,849	+		AO353_08270	0.75	+0.2
1,818,849	+		AO353_08270	0.75	+1.2
1,818,849	+		AO353_08270	0.75	+2.3
1,818,849	+		AO353_08270	0.75	-0.3
1,818,849	+		AO353_08270	0.75	+0.1
1,818,850	-		AO353_08270	0.75	+0.3
1,818,850	-		AO353_08270	0.75	-0.5
1,818,850	-		AO353_08270	0.75	+0.0
1,818,850	-				+0.3
1,818,850	-		AO353_08270	0.75	+1.5
1,818,850	-		AO353_08270	0.75	-0.6
1,818,850	-		AO353_08270	0.75	-0.7
1,818,850	-		AO353_08270	0.75	+1.5
1,818,850	-		AO353_08270	0.75	-1.3
1,818,850	-		AO353_08270	0.75	+0.7
1,818,873	+		AO353_08270	0.77	+1.9
1,818,967	+		AO353_08270	0.87	+0.1
1,819,050	+				-0.8
1,819,050	+				+2.2
1,819,050	+				+1.0
1,819,050	+				+3.3
1,819,050	+				+1.1
1,819,050	+				-1.4
1,819,051	-				+0.9
1,819,051	-				+0.9
1,819,051	-				-0.3
1,819,051	-				-0.5
1,819,051	-				+0.6
1,819,051	-				-0.9
1,819,098	+				+0.6
1,819,098	+				+0.4
1,819,099	-				-0.6
1,819,099	-				+0.0
1,819,099	-				+0.1
1,819,183	+				+0.6
1,819,183	+				+0.0
1,819,184	-				+0.4
1,819,184	-				+1.2
1,819,211	+		AO353_08275	0.13	-0.0
1,819,211	+		AO353_08275	0.13	+1.3
1,819,211	+		AO353_08275	0.13	+0.8
1,819,211	+		AO353_08275	0.13	-0.1
1,819,211	+		AO353_08275	0.13	-1.7
1,819,211	+		AO353_08275	0.13	-0.3
1,819,212	-		AO353_08275	0.13	-0.3
1,819,212	-		AO353_08275	0.13	-0.6
1,819,212	-		AO353_08275	0.13	+1.2
1,819,212	-		AO353_08275	0.13	-0.5
1,819,212	-		AO353_08275	0.13	-1.2
1,819,212	-		AO353_08275	0.13	-0.9
1,819,212	-		AO353_08275	0.13	+1.6
1,819,212	-		AO353_08275	0.13	-0.7
1,819,212	-		AO353_08275	0.13	+1.9
1,819,212	-		AO353_08275	0.13	-1.3
1,819,212	-		AO353_08275	0.13	-0.4
1,819,364	-		AO353_08275	0.31	-0.2
1,819,375	+		AO353_08275	0.32	+1.3
1,819,375	+		AO353_08275	0.32	-0.7
1,819,376	-		AO353_08275	0.33	+0.9
1,819,376	-		AO353_08275	0.33	-0.0
1,819,376	-		AO353_08275	0.33	-1.8
1,819,376	-		AO353_08275	0.33	+0.3
1,819,459	+		AO353_08275	0.43	+0.9
1,819,459	+		AO353_08275	0.43	-1.0
1,819,589	+		AO353_08275	0.58	+0.1
1,819,590	-		AO353_08275	0.58	+0.2
1,819,590	-		AO353_08275	0.58	+0.3
1,819,802	+		AO353_08275	0.84	+0.3
1,819,802	+		AO353_08275	0.84	-1.7
1,819,802	+		AO353_08275	0.84	+1.3
1,819,802	+		AO353_08275	0.84	+2.3
1,819,803	-		AO353_08275	0.84	-0.7
1,819,803	-		AO353_08275	0.84	-1.3
1,819,803	-		AO353_08275	0.84	-0.7
1,819,805	+		AO353_08275	0.84	-0.7
1,819,805	+		AO353_08275	0.84	+0.6
1,819,805	+		AO353_08275	0.84	+0.9
1,819,891	+				+0.2
1,819,892	-				-1.1
1,819,952	-				-0.6
1,819,952	-				-0.5
1,819,972	+				-0.1
1,820,032	+				+0.3
1,820,032	+				+0.7
1,820,032	+				+0.3
1,820,033	-				-1.1
1,820,033	-				+1.3