Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07625

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
1,677,680	+				+0.3
1,677,681	-				-3.6
1,677,694	-				+1.1
1,677,696	+				+0.9
1,677,696	+				-0.3
1,677,696	+				-0.3
1,677,696	+				-0.5
1,677,696	+				-0.7
1,677,696	+				-0.9
1,677,696	+				-0.5
1,677,697	-				-0.1
1,677,697	-				+0.2
1,677,697	-				-0.0
1,677,697	-				+1.3
1,677,697	-				+3.6
1,677,697	-				-2.0
1,677,697	-				-0.6
1,677,697	-				-0.6
1,677,697	-				-0.7
1,677,697	-				+1.9
1,677,697	-				-0.3
1,677,742	-				-1.1
1,677,791	+				+0.3
1,677,791	+				+0.3
1,677,791	+				+1.1
1,677,791	+				-0.3
1,677,791	+				-0.2
1,677,791	+				-0.7
1,677,791	+				-2.7
1,677,791	+				-0.3
1,677,792	-				-0.2
1,677,792	-				+0.6
1,677,792	-				+0.6
1,677,792	-				-0.0
1,677,792	-				+0.6
1,677,792	-				+0.3
1,677,792	-				-0.3
1,677,792	-				-0.3
1,677,792	-				+0.5
1,677,792	-				-0.7
1,677,792	-				-1.2
1,677,792	-				-0.1
1,677,792	-				-0.9
1,677,792	-				+0.0
1,677,792	-				-0.2
1,677,792	-				+1.6
1,677,792	-				-0.7
1,677,794	-				-0.5
1,677,794	-				+0.3
1,677,832	+				-0.1
1,677,832	+				-0.1
1,677,832	+				-1.1
1,677,832	+				+0.3
1,677,833	-				-0.2
1,677,833	-				-0.3
1,677,833	-				+2.7
1,677,833	-				-0.3
1,677,833	-				+1.3
1,677,833	-				+1.3
1,677,856	+				-0.2
1,677,856	+				-0.1
1,677,857	-				+1.3
1,677,857	-				+1.4
1,677,857	-				-1.3
1,677,862	+				+0.7
1,677,863	-				-0.2
1,677,863	-				-0.7
1,677,863	-				+1.7
1,677,957	+		AO353_07620	0.19	-0.1
1,677,957	+		AO353_07620	0.19	+0.0
1,677,957	+		AO353_07620	0.19	+0.3
1,677,958	-		AO353_07620	0.19	+1.0
1,677,958	-		AO353_07620	0.19	-1.9
1,677,958	-		AO353_07620	0.19	-0.9
1,677,958	-		AO353_07620	0.19	+0.9
1,677,958	-		AO353_07620	0.19	-0.6
1,677,958	-		AO353_07620	0.19	-2.2
1,677,960	+		AO353_07620	0.19	+0.0
1,677,961	-		AO353_07620	0.20	-1.7
1,677,961	-		AO353_07620	0.20	-0.1
1,678,004	-		AO353_07620	0.27	+0.0
1,678,011	+		AO353_07620	0.28	-0.2
1,678,047	+		AO353_07620	0.34	-0.5
1,678,047	+		AO353_07620	0.34	+0.7
1,678,048	-		AO353_07620	0.34	+1.3
1,678,048	-		AO353_07620	0.34	+0.4
1,678,081	+		AO353_07620	0.40	-1.2
1,678,082	-		AO353_07620	0.40	-0.1
1,678,199	+		AO353_07620	0.60	+0.5
1,678,199	+		AO353_07620	0.60	-1.7
1,678,200	-		AO353_07620	0.60	-2.5
1,678,200	-		AO353_07620	0.60	-0.3
1,678,369	+		AO353_07620	0.88	-0.4
1,678,369	+		AO353_07620	0.88	-0.5
1,678,369	+		AO353_07620	0.88	-0.1
1,678,369	+		AO353_07620	0.88	-0.9
1,678,369	+		AO353_07620	0.88	+0.3
1,678,369	+		AO353_07620	0.88	-0.7
1,678,369	+		AO353_07620	0.88	+0.7
1,678,369	+		AO353_07620	0.88	-0.5
1,678,369	+		AO353_07620	0.88	-1.5
1,678,369	+		AO353_07620	0.88	+0.9
1,678,369	+		AO353_07620	0.88	-0.2
1,678,370	-		AO353_07620	0.88	+1.0
1,678,370	-		AO353_07620	0.88	-0.3
1,678,370	-		AO353_07620	0.88	+0.6
1,678,370	-		AO353_07620	0.88	+1.0
1,678,370	-		AO353_07620	0.88	-1.1
1,678,370	-		AO353_07620	0.88	+2.3
1,678,370	-		AO353_07620	0.88	-1.3
1,678,370	-		AO353_07620	0.88	-1.6
1,678,370	-		AO353_07620	0.88	-0.9
1,678,373	+		AO353_07620	0.89	+1.3
1,678,373	+		AO353_07620	0.89	+2.3
1,678,373	+		AO353_07620	0.89	-1.5
1,678,373	+		AO353_07620	0.89	-1.1
1,678,373	+		AO353_07620	0.89	-0.3
1,678,373	+		AO353_07620	0.89	-1.5
1,678,373	+		AO353_07620	0.89	+1.0
1,678,373	+		AO353_07620	0.89	-0.3
1,678,373	+		AO353_07620	0.89	+0.1
1,678,373	+		AO353_07620	0.89	+0.1
1,678,373	+		AO353_07620	0.89	+0.8
1,678,373	+		AO353_07620	0.89	+0.5
1,678,374	-		AO353_07620	0.89	-1.1
1,678,374	-		AO353_07620	0.89	+0.5
1,678,374	-		AO353_07620	0.89	-0.1
1,678,374	-		AO353_07620	0.89	+0.0
1,678,374	-		AO353_07620	0.89	+0.3
1,678,374	-		AO353_07620	0.89	-1.3
1,678,374	-		AO353_07620	0.89	-0.8
1,678,374	-		AO353_07620	0.89	-1.5
1,678,374	-		AO353_07620	0.89	+0.3
1,678,382	+				-0.3
1,678,382	+				+1.7
1,678,383	-				-1.1
1,678,436	+				-0.5
1,678,436	+				+0.1
1,678,436	+				+0.2
1,678,436	+				+1.1
1,678,521	+				+0.9
1,678,522	-				-0.0
1,678,522	-				+0.7
1,678,522	-				-2.2
1,678,522	-				-0.3
1,678,522	-				-0.2
1,678,659	-		AO353_07625	0.26	+0.2
1,678,689	+		AO353_07625	0.31	+1.3
1,678,689	+		AO353_07625	0.31	+1.1
1,678,689	+		AO353_07625	0.31	+0.3
1,678,690	-		AO353_07625	0.31	+2.6
1,678,845	+		AO353_07625	0.56	-0.4
1,678,845	+		AO353_07625	0.56	-1.5
1,678,846	-		AO353_07625	0.56	+0.1
1,678,953	+		AO353_07625	0.73	+0.5
1,679,009	+		AO353_07625	0.82	+1.2
1,679,010	-		AO353_07625	0.82	-0.7
1,679,010	-		AO353_07625	0.82	+0.4
1,679,128	+				+2.5
1,679,128	+				-0.0
1,679,128	+				-0.0
1,679,128	+				+0.3
1,679,128	+				-0.3
1,679,128	+				-0.9
1,679,128	+				+0.8
1,679,128	+				+0.2
1,679,129	-				-1.5
1,679,129	-				-1.5
1,679,129	-				+0.4
1,679,129	-				+0.6
1,679,129	-				+1.3
1,679,129	-				-0.7
1,679,129	-				-1.0
1,679,129	-				-1.2
1,679,216	+		AO353_07630	0.14	-2.2
1,679,216	+		AO353_07630	0.14	+1.0
1,679,216	+		AO353_07630	0.14	-0.2
1,679,216	+		AO353_07630	0.14	-1.5
1,679,216	+		AO353_07630	0.14	+1.9
1,679,217	-		AO353_07630	0.14	-0.3
1,679,217	-		AO353_07630	0.14	+0.3
1,679,217	-		AO353_07630	0.14	-0.0
1,679,217	-		AO353_07630	0.14	-3.6
1,679,217	-		AO353_07630	0.14	-0.5
1,679,217	-		AO353_07630	0.14	-1.6
1,679,217	-		AO353_07630	0.14	+0.1
1,679,217	-		AO353_07630	0.14	-0.8
1,679,449	+		AO353_07630	0.48	-0.7
1,679,449	+		AO353_07630	0.48	+2.1
1,679,449	+		AO353_07630	0.48	-0.1
1,679,449	+		AO353_07630	0.48	+1.6
1,679,449	+		AO353_07630	0.48	+1.7
1,679,450	-		AO353_07630	0.49	-0.3
1,679,450	-		AO353_07630	0.49	+0.7
1,679,470	+		AO353_07630	0.52	+0.6
1,679,471	-		AO353_07630	0.52	+0.2
1,679,471	-		AO353_07630	0.52	+0.6
1,679,533	+		AO353_07630	0.61	+1.5
1,679,533	+		AO353_07630	0.61	-0.3
1,679,533	+		AO353_07630	0.61	+1.0
1,679,533	+		AO353_07630	0.61	-1.2
1,679,533	+		AO353_07630	0.61	-1.0
1,679,534	-		AO353_07630	0.61	-0.1
1,679,534	-		AO353_07630	0.61	-1.6
1,679,534	-		AO353_07630	0.61	-1.3
1,679,534	-		AO353_07630	0.61	-0.7
1,679,771	-				-0.9
1,679,771	-				-0.7
1,679,771	-				+0.6
1,679,771	-				+1.3
1,679,771	-				-1.8
1,679,771	-				+0.8
1,679,794	+				-1.9
1,679,795	-				+0.7
1,679,795	-				-1.3
1,679,847	+				-0.6
1,679,847	+				-0.1
1,679,948	+				-1.3
1,679,948	+				-1.0
1,679,949	-				-1.3
1,679,949	-				-0.7
1,679,957	+				-0.2
1,679,958	-				-0.1
1,679,958	-				+1.0
1,679,969	-				-0.9
1,680,015	+				+0.5
1,680,015	+				+0.7
1,680,015	+				+0.7