Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3350
Experiment: benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | benzoic 0.4 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,018,035 | + | +1.0 | |||
| 4,018,035 | + | +1.0 | |||
| 4,018,282 | + | Shewana3_3349 | 0.34 | +1.0 | |
| 4,018,282 | + | Shewana3_3349 | 0.34 | -0.3 | |
| 4,018,309 | - | Shewana3_3349 | 0.38 | -0.2 | |
| 4,018,731 | + | +1.0 | |||
| 4,018,731 | + | +1.0 | |||
| 4,018,733 | + | +1.0 | |||
| 4,018,901 | - | -0.5 | |||
| 4,019,021 | + | Shewana3_3350 | 0.11 | +1.0 | |
| 4,019,021 | + | Shewana3_3350 | 0.11 | -0.5 | |
| 4,019,029 | - | Shewana3_3350 | 0.12 | -0.7 | |
| 4,019,340 | - | Shewana3_3350 | 0.41 | -0.7 | |
| 4,019,345 | - | Shewana3_3350 | 0.41 | -0.5 | |
| 4,019,601 | + | Shewana3_3350 | 0.65 | +0.0 | |
| 4,019,730 | - | Shewana3_3350 | 0.77 | -0.9 | |
| 4,019,921 | - | -0.5 |
Or see this region's nucleotide sequence