Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3278

Experiment: benzoic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.4 mg/ml
3,916,821	-				-0.2
3,916,940	-	cobS	Shewana3_3277	0.17	-0.8
3,916,940	-	cobS	Shewana3_3277	0.17	-0.1
3,916,983	-	cobS	Shewana3_3277	0.22	-0.2
3,916,983	-	cobS	Shewana3_3277	0.22	-0.7
3,917,022	-	cobS	Shewana3_3277	0.27	-0.0
3,917,129	+	cobS	Shewana3_3277	0.41	+1.0
3,917,175	-	cobS	Shewana3_3277	0.47	+0.5
3,917,249	+	cobS	Shewana3_3277	0.56	+1.0
3,917,359	+	cobS	Shewana3_3277	0.70	-1.0
3,917,364	+	cobS	Shewana3_3277	0.71	-0.6
3,917,367	-	cobS	Shewana3_3277	0.71	-0.6
3,917,376	-	cobS	Shewana3_3277	0.72	+0.0
3,917,411	-	cobS	Shewana3_3277	0.77	-0.5
3,917,428	+	cobS	Shewana3_3277	0.79	-0.3
3,917,512	-	cobS	Shewana3_3277	0.89	-0.3
3,917,780	-				+0.2
3,917,953	-	cobT	Shewana3_3278	0.25	-0.1
3,917,981	+	cobT	Shewana3_3278	0.28	+0.0
3,918,161	+	cobT	Shewana3_3278	0.45	+0.6
3,918,205	+	cobT	Shewana3_3278	0.49	-0.7
3,918,213	-	cobT	Shewana3_3278	0.50	-2.1
3,918,299	-	cobT	Shewana3_3278	0.58	-0.1
3,918,314	-	cobT	Shewana3_3278	0.59	-0.3
3,918,314	-	cobT	Shewana3_3278	0.59	-0.8
3,918,314	-	cobT	Shewana3_3278	0.59	-0.3
3,918,314	-	cobT	Shewana3_3278	0.59	-0.3
3,918,314	-	cobT	Shewana3_3278	0.59	-0.1
3,918,477	+	cobT	Shewana3_3278	0.75	+0.0
3,918,485	-	cobT	Shewana3_3278	0.75	-0.4
3,918,514	+	cobT	Shewana3_3278	0.78	+1.0
3,918,733	+				+2.0
3,918,741	-				+0.2
3,919,107	-		Shewana3_3279	0.18	-0.1
3,919,219	-		Shewana3_3279	0.27	-0.1
3,919,226	-		Shewana3_3279	0.28	-0.1
3,919,226	-		Shewana3_3279	0.28	+0.0
3,919,418	-		Shewana3_3279	0.45	+0.5
3,919,432	-		Shewana3_3279	0.46	+0.1
3,919,478	+		Shewana3_3279	0.50	+0.0
3,919,626	-		Shewana3_3279	0.63	-0.1
3,919,636	+		Shewana3_3279	0.64	-1.6