Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2251
Experiment: benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | benzoic 0.4 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,712,294 | - | Shewana3_2250 | 0.54 | +0.9 | |
| 2,712,682 | - | Shewana3_2250 | 0.84 | +0.9 | |
| 2,712,762 | + | Shewana3_2250 | 0.90 | +0.9 | |
| 2,713,259 | + | Shewana3_2251 | 0.35 | -0.6 | |
| 2,713,301 | + | Shewana3_2251 | 0.41 | -0.1 | |
| 2,713,568 | + | Shewana3_2251 | 0.80 | +0.9 | |
| 2,713,709 | + | +1.9 | |||
| 2,714,166 | - | Shewana3_2252 | 0.34 | +1.2 | |
| 2,714,454 | + | Shewana3_2252 | 0.62 | +0.9 | |
| 2,714,651 | - | Shewana3_2252 | 0.81 | +1.7 |
Or see this region's nucleotide sequence