Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1964
Experiment: benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | benzoic 0.4 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,335,938 | - | ansA | Shewana3_1963 | 0.19 | -0.6 |
| 2,336,041 | - | ansA | Shewana3_1963 | 0.29 | -0.4 |
| 2,336,150 | - | ansA | Shewana3_1963 | 0.40 | -0.0 |
| 2,336,215 | + | ansA | Shewana3_1963 | 0.46 | +1.0 |
| 2,336,463 | + | +1.0 | |||
| 2,336,541 | - | ansA | Shewana3_1963 | 0.78 | +1.0 |
| 2,336,760 | + | -0.4 | |||
| 2,336,920 | - | +0.2 | |||
| 2,336,981 | + | +1.0 | |||
| 2,337,126 | + | Shewana3_1964 | 0.14 | +1.0 | |
| 2,337,500 | + | Shewana3_1964 | 0.34 | -0.0 | |
| 2,337,814 | - | Shewana3_1964 | 0.51 | -1.0 | |
| 2,338,023 | + | Shewana3_1964 | 0.62 | +1.0 | |
| 2,338,094 | - | Shewana3_1964 | 0.66 | -0.6 | |
| 2,338,317 | + | Shewana3_1964 | 0.78 | -0.0 | |
| 2,338,385 | - | Shewana3_1964 | 0.82 | +1.0 | |
| 2,339,364 | - | Shewana3_1965 | 0.24 | +1.0 |
Or see this region's nucleotide sequence