Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4659 and Pf1N1B4_4660 are separated by 230 nucleotides Pf1N1B4_4660 and Pf1N1B4_4661 are separated by 185 nucleotides Pf1N1B4_4661 and Pf1N1B4_4662 are separated by 229 nucleotides
Pf1N1B4_4659 - Putative outer membrane lipoprotein, at 5,137,476 to 5,138,147
_4659
Pf1N1B4_4660 - PhnB protein, at 5,138,378 to 5,138,803
_4660
Pf1N1B4_4661 - Cell division inhibitor SULA, at 5,138,989 to 5,139,432
_4661
Pf1N1B4_4662 - Thiol peroxidase, Tpx-type (EC 1.11.1.15), at 5,139,662 to 5,140,162
_4662
Position (kb)
5138
5139
5140 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5138.146 kb on - strand at 5138.281 kb on + strand at 5138.281 kb on + strand at 5138.355 kb on - strand at 5138.355 kb on - strand at 5138.355 kb on - strand at 5138.464 kb on - strand, within Pf1N1B4_4660 at 5138.928 kb on - strand at 5138.928 kb on - strand at 5138.928 kb on - strand at 5138.950 kb on + strand at 5139.041 kb on + strand, within Pf1N1B4_4661 at 5139.310 kb on + strand at 5139.310 kb on + strand, within Pf1N1B4_4661 at 5139.311 kb on - strand, within Pf1N1B4_4661 at 5139.311 kb on - strand, within Pf1N1B4_4661 at 5139.311 kb on - strand, within Pf1N1B4_4661 at 5139.376 kb on + strand, within Pf1N1B4_4661 at 5139.376 kb on + strand, within Pf1N1B4_4661 at 5139.411 kb on + strand at 5139.411 kb on + strand at 5139.412 kb on - strand at 5139.417 kb on + strand at 5139.444 kb on - strand at 5139.444 kb on - strand at 5139.444 kb on - strand at 5139.528 kb on + strand at 5139.529 kb on - strand at 5139.538 kb on - strand at 5139.575 kb on + strand at 5139.575 kb on + strand at 5139.575 kb on + strand at 5139.575 kb on + strand at 5139.585 kb on + strand at 5139.585 kb on + strand at 5139.634 kb on + strand at 5139.679 kb on + strand at 5140.133 kb on + strand at 5140.134 kb on - strand at 5140.134 kb on - strand at 5140.134 kb on - strand at 5140.164 kb on + strand at 5140.165 kb on - strand at 5140.165 kb on - strand at 5140.208 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 5,138,146 - +1.3 5,138,281 + -1.6 5,138,281 + -0.9 5,138,355 - -0.7 5,138,355 - +1.7 5,138,355 - -0.5 5,138,464 - Pf1N1B4_4660 0.20 -1.3 5,138,928 - -1.3 5,138,928 - -1.6 5,138,928 - -1.3 5,138,950 + -1.9 5,139,041 + Pf1N1B4_4661 0.12 -2.6 5,139,310 + -0.3 5,139,310 + Pf1N1B4_4661 0.72 -1.9 5,139,311 - Pf1N1B4_4661 0.73 +1.3 5,139,311 - Pf1N1B4_4661 0.73 +0.1 5,139,311 - Pf1N1B4_4661 0.73 -1.3 5,139,376 + Pf1N1B4_4661 0.87 -2.9 5,139,376 + Pf1N1B4_4661 0.87 -0.7 5,139,411 + +0.7 5,139,411 + -0.8 5,139,412 - -2.6 5,139,417 + -0.8 5,139,444 - -0.0 5,139,444 - -0.7 5,139,444 - +1.3 5,139,528 + +0.7 5,139,529 - -0.9 5,139,538 - -0.3 5,139,575 + -0.6 5,139,575 + -0.3 5,139,575 + -0.3 5,139,575 + -1.6 5,139,585 + +0.4 5,139,585 + -0.3 5,139,634 + +0.1 5,139,679 + +0.3 5,140,133 + +1.4 5,140,134 - -1.9 5,140,134 - +0.0 5,140,134 - -1.3 5,140,164 + +0.3 5,140,165 - -0.3 5,140,165 - +0.7 5,140,208 - +1.3
Or see this region's nucleotide sequence