Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18040

Experiment: Choline chloride 358 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 358 mM
3,969,518	+		AO353_18030	0.55	+2.3
3,969,546	-		AO353_18030	0.63	+0.5
3,969,550	-		AO353_18030	0.64	-0.7
3,969,663	+				-0.7
3,969,726	+				+0.7
3,969,726	+				+0.1
3,969,727	-				+0.9
3,969,732	+				-2.5
3,969,733	-				-0.3
3,969,733	-				+0.4
3,969,778	+				-0.9
3,969,824	+				+0.3
3,969,832	+				+2.1
3,969,832	+				+0.1
3,969,854	+				-1.7
3,969,996	+		AO353_18035	0.22	-2.5
3,969,996	+		AO353_18035	0.22	+1.7
3,969,996	+		AO353_18035	0.22	+0.7
3,969,996	+		AO353_18035	0.22	+1.1
3,970,262	+		AO353_18035	0.68	-1.3
3,970,262	+		AO353_18035	0.68	-1.3
3,970,262	+		AO353_18035	0.68	+0.7
3,970,262	+		AO353_18035	0.68	+0.1
3,970,263	-		AO353_18035	0.69	-0.3
3,970,263	-		AO353_18035	0.69	-0.0
3,970,263	-		AO353_18035	0.69	+0.4
3,970,288	+		AO353_18035	0.73	+1.3
3,970,288	+		AO353_18035	0.73	-0.1
3,970,288	+		AO353_18035	0.73	-0.9
3,970,288	+		AO353_18035	0.73	-0.7
3,970,289	-		AO353_18035	0.73	-0.3
3,970,289	-		AO353_18035	0.73	+0.3
3,970,311	+		AO353_18035	0.77	-0.8
3,970,311	+		AO353_18035	0.77	-0.5
3,970,312	-		AO353_18035	0.77	-1.1
3,970,333	+		AO353_18035	0.81	+0.9
3,970,333	+		AO353_18035	0.81	-1.7
3,970,333	+		AO353_18035	0.81	-1.0
3,970,333	+		AO353_18035	0.81	-1.9
3,970,333	+		AO353_18035	0.81	+0.5
3,970,333	+		AO353_18035	0.81	-0.8
3,970,333	+		AO353_18035	0.81	-0.7
3,970,333	+		AO353_18035	0.81	-1.5
3,970,333	+		AO353_18035	0.81	+0.8
3,970,333	+		AO353_18035	0.81	+0.3
3,970,334	-		AO353_18035	0.81	-1.3
3,970,334	-		AO353_18035	0.81	+0.3
3,970,334	-		AO353_18035	0.81	+0.7
3,970,334	-		AO353_18035	0.81	-0.5
3,970,334	-		AO353_18035	0.81	-0.5
3,970,334	-		AO353_18035	0.81	-0.9
3,970,334	-		AO353_18035	0.81	+0.3
3,970,334	-		AO353_18035	0.81	+0.3
3,970,334	-		AO353_18035	0.81	+1.2
3,970,334	-		AO353_18035	0.81	-1.3
3,970,334	-		AO353_18035	0.81	+0.7
3,970,334	-		AO353_18035	0.81	-0.7
3,970,334	-		AO353_18035	0.81	+0.3
3,970,435	+				+3.3
3,970,435	+				+0.7
3,970,436	-				+0.1
3,970,436	-				+0.3
3,970,436	-				-1.3
3,970,436	-				-0.8
3,970,441	+				+0.1
3,970,441	+				+0.1
3,970,441	+				+1.0
3,970,441	+				+0.6
3,970,441	+				+0.2
3,970,441	+				-0.3
3,970,442	-				-0.1
3,970,442	-				-0.0
3,970,442	-				+0.3
3,970,451	-				-0.7
3,970,506	+				-0.9
3,970,507	-				+0.1
3,970,507	-				+0.2
3,970,507	-				-1.1
3,970,607	-		AO353_18040	0.14	-1.9
3,970,614	+		AO353_18040	0.15	-0.6
3,970,615	-		AO353_18040	0.15	-0.7
3,970,729	-		AO353_18040	0.31	-2.1
3,970,732	-		AO353_18040	0.32	+0.2
3,970,732	-		AO353_18040	0.32	+0.1
3,970,797	-		AO353_18040	0.41	+1.7
3,970,875	+		AO353_18040	0.52	-1.6
3,970,875	+		AO353_18040	0.52	+1.0
3,970,876	-		AO353_18040	0.53	-1.2
3,970,912	-		AO353_18040	0.58	-0.9
3,971,010	+		AO353_18040	0.72	+1.1
3,971,148	-				+0.3
3,971,157	-				+0.7
3,971,277	-				-2.5
3,971,280	+				-3.0
3,971,281	-				-2.3
3,971,284	+				-0.6
3,971,285	-				-0.2
3,971,336	-				-0.3
3,971,344	+				-1.4
3,971,344	+				-0.2
3,971,344	+				+0.9
3,971,446	+				+0.1
3,971,447	-				+0.7
3,971,447	-				+0.3
3,971,447	-				-1.2
3,971,635	+		AO353_18045	0.15	-0.9
3,971,635	+		AO353_18045	0.15	+0.7
3,971,635	+		AO353_18045	0.15	+0.1
3,971,635	+		AO353_18045	0.15	-0.5
3,971,635	+		AO353_18045	0.15	-1.1
3,971,636	-		AO353_18045	0.15	-1.7
3,971,636	-		AO353_18045	0.15	+1.7
3,971,636	-		AO353_18045	0.15	+1.1
3,971,636	-		AO353_18045	0.15	+0.3
3,971,636	-		AO353_18045	0.15	-0.9
3,971,636	-		AO353_18045	0.15	-0.9
3,971,665	+		AO353_18045	0.16	+0.9
3,971,665	+		AO353_18045	0.16	-1.9
3,971,665	+		AO353_18045	0.16	-0.3
3,971,665	+		AO353_18045	0.16	-1.1
3,971,665	+		AO353_18045	0.16	-1.1
3,971,665	+		AO353_18045	0.16	-0.1
3,971,665	+		AO353_18045	0.16	+0.8
3,971,665	+		AO353_18045	0.16	+0.1
3,971,665	+		AO353_18045	0.16	-1.3
3,971,665	+		AO353_18045	0.16	-0.5
3,971,665	+		AO353_18045	0.16	-1.7
3,971,665	+		AO353_18045	0.16	-0.3
3,971,666	-		AO353_18045	0.16	-1.3
3,971,666	-		AO353_18045	0.16	+0.3
3,971,666	-		AO353_18045	0.16	+1.3
3,971,666	-		AO353_18045	0.16	-1.4
3,971,666	-		AO353_18045	0.16	+0.7
3,971,666	-		AO353_18045	0.16	+0.9
3,971,666	-		AO353_18045	0.16	+0.8
3,971,666	-		AO353_18045	0.16	+0.3
3,971,671	+		AO353_18045	0.16	+0.0
3,971,671	+		AO353_18045	0.16	+0.7
3,971,671	+		AO353_18045	0.16	+0.1
3,971,671	+		AO353_18045	0.16	-0.3
3,971,672	-		AO353_18045	0.16	-1.7
3,971,672	-		AO353_18045	0.16	-0.7
3,971,784	+		AO353_18045	0.21	+0.1
3,971,784	+		AO353_18045	0.21	-0.7
3,971,788	+		AO353_18045	0.21	-1.1
3,971,789	-		AO353_18045	0.21	-0.1
3,971,821	+				-0.9
3,971,821	+		AO353_18045	0.22	-0.4
3,971,821	+		AO353_18045	0.22	+1.3
3,971,821	+		AO353_18045	0.22	+0.4
3,971,821	+		AO353_18045	0.22	+1.5
3,971,822	-		AO353_18045	0.22	+0.2
3,971,822	-		AO353_18045	0.22	-0.7
3,971,865	+		AO353_18045	0.24	+0.9
3,971,865	+		AO353_18045	0.24	+1.3
3,971,865	+		AO353_18045	0.24	+0.2
3,971,865	+		AO353_18045	0.24	-0.3
3,971,865	+		AO353_18045	0.24	+0.7
3,971,868	+		AO353_18045	0.24	-0.3
3,971,868	+		AO353_18045	0.24	-0.0
3,971,868	+		AO353_18045	0.24	+0.4
3,971,869	-		AO353_18045	0.24	+1.2
3,971,869	-		AO353_18045	0.24	-0.9
3,971,869	-		AO353_18045	0.24	-0.7
3,971,950	+		AO353_18045	0.27	-0.1
3,971,950	+		AO353_18045	0.27	-1.8
3,971,950	+		AO353_18045	0.27	+0.3
3,971,950	+		AO353_18045	0.27	-1.1
3,971,950	+		AO353_18045	0.27	-1.1
3,971,950	+		AO353_18045	0.27	+0.9
3,971,950	+		AO353_18045	0.27	+0.3
3,971,950	+		AO353_18045	0.27	-1.5
3,971,950	+		AO353_18045	0.27	-0.3
3,971,950	+		AO353_18045	0.27	-0.1
3,971,950	+		AO353_18045	0.27	+0.2
3,971,950	+		AO353_18045	0.27	-1.3
3,971,950	+		AO353_18045	0.27	+1.1
3,971,950	+		AO353_18045	0.27	-0.3
3,971,950	+		AO353_18045	0.27	-0.9
3,971,950	+		AO353_18045	0.27	-0.6
3,971,951	-		AO353_18045	0.27	+2.3
3,971,951	-		AO353_18045	0.27	-0.1
3,971,951	-		AO353_18045	0.27	-0.7
3,971,951	-		AO353_18045	0.27	+1.1
3,971,951	-		AO353_18045	0.27	-1.3
3,971,951	-		AO353_18045	0.27	+0.2
3,971,951	-		AO353_18045	0.27	-0.7
3,971,951	-		AO353_18045	0.27	-0.8
3,971,951	-		AO353_18045	0.27	-1.1
3,971,951	-				+0.7
3,971,951	-		AO353_18045	0.27	+0.4
3,972,037	+		AO353_18045	0.30	-0.7
3,972,046	-		AO353_18045	0.31	+1.3
3,972,090	+		AO353_18045	0.32	+0.7
3,972,091	-		AO353_18045	0.33	+1.7
3,972,091	-		AO353_18045	0.33	-1.1
3,972,157	+		AO353_18045	0.35	-0.9
3,972,158	-		AO353_18045	0.35	+0.1
3,972,158	-		AO353_18045	0.35	+1.8
3,972,158	-		AO353_18045	0.35	-0.2