Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11005

Experiment: Choline chloride 358 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 358 mM
2,403,779	+		AO353_10995	0.87	+0.5
2,403,780	-		AO353_10995	0.87	-1.9
2,403,780	-		AO353_10995	0.87	-0.7
2,403,807	+		AO353_10995	0.90	+0.5
2,403,807	+		AO353_10995	0.90	-0.9
2,403,807	+		AO353_10995	0.90	-0.3
2,403,807	+		AO353_10995	0.90	+0.5
2,403,807	+		AO353_10995	0.90	+0.8
2,403,807	+		AO353_10995	0.90	-0.3
2,403,807	+		AO353_10995	0.90	-0.5
2,403,807	+		AO353_10995	0.90	-1.8
2,403,807	+		AO353_10995	0.90	+0.4
2,403,807	+		AO353_10995	0.90	-0.9
2,403,807	+		AO353_10995	0.90	-0.1
2,403,807	+		AO353_10995	0.90	+0.7
2,403,807	+		AO353_10995	0.90	-1.9
2,403,807	+		AO353_10995	0.90	-0.2
2,403,807	+		AO353_10995	0.90	-0.7
2,403,807	+		AO353_10995	0.90	+0.6
2,403,807	+		AO353_10995	0.90	+1.3
2,403,807	+		AO353_10995	0.90	-0.4
2,403,807	+		AO353_10995	0.90	+1.3
2,403,807	+		AO353_10995	0.90	+0.8
2,403,807	+		AO353_10995	0.90	-0.0
2,403,807	+		AO353_10995	0.90	-0.3
2,403,807	+		AO353_10995	0.90	-1.5
2,403,808	-		AO353_10995	0.90	+1.3
2,403,808	-		AO353_10995	0.90	-0.3
2,403,808	-		AO353_10995	0.90	-0.7
2,403,808	-		AO353_10995	0.90	+0.3
2,403,808	-		AO353_10995	0.90	+1.8
2,403,808	-		AO353_10995	0.90	+0.7
2,403,808	-		AO353_10995	0.90	+0.0
2,403,808	-		AO353_10995	0.90	+0.2
2,403,808	-		AO353_10995	0.90	-1.5
2,403,808	-		AO353_10995	0.90	+1.6
2,403,808	-		AO353_10995	0.90	-2.2
2,403,808	-		AO353_10995	0.90	+0.3
2,403,808	-		AO353_10995	0.90	+0.1
2,403,808	-		AO353_10995	0.90	+0.1
2,403,808	-		AO353_10995	0.90	+0.7
2,403,808	-		AO353_10995	0.90	+0.1
2,403,808	-		AO353_10995	0.90	-0.0
2,403,808	-		AO353_10995	0.90	+0.2
2,403,808	-		AO353_10995	0.90	-0.7
2,403,822	+				+0.4
2,403,823	-				-0.0
2,403,823	-				-1.3
2,403,823	-				-0.6
2,403,942	+				-1.0
2,403,943	-				+0.8
2,403,987	+				+1.5
2,403,987	+				+1.0
2,403,987	+				+0.5
2,403,987	+				+1.6
2,403,987	+				+0.3
2,404,009	-				+0.5
2,404,009	-				-0.5
2,404,033	-				-0.6
2,404,080	+				+0.4
2,404,080	+				+1.7
2,404,080	+				+0.5
2,404,081	-				+0.5
2,404,081	-				-2.2
2,404,081	-				-0.3
2,404,081	-				-0.1
2,404,091	+				-0.2
2,404,092	-				+0.7
2,404,092	-				-1.5
2,404,092	-				-1.4
2,404,092	-				-0.3
2,404,110	+				-0.0
2,404,300	+		AO353_11000	0.36	-0.9
2,404,301	-		AO353_11000	0.36	+0.3
2,404,301	-		AO353_11000	0.36	+1.8
2,404,301	-		AO353_11000	0.36	-0.3
2,404,380	+		AO353_11000	0.48	-0.2
2,404,380	+		AO353_11000	0.48	-1.3
2,404,380	+		AO353_11000	0.48	+0.7
2,404,380	+		AO353_11000	0.48	-0.5
2,404,380	+		AO353_11000	0.48	+0.8
2,404,381	-		AO353_11000	0.48	-0.7
2,404,381	-		AO353_11000	0.48	-0.3
2,404,437	-		AO353_11000	0.57	-1.4
2,404,437	-		AO353_11000	0.57	-1.2
2,404,462	+		AO353_11000	0.61	-1.5
2,404,462	+		AO353_11000	0.61	+1.0
2,404,462	+		AO353_11000	0.61	-0.2
2,404,462	+		AO353_11000	0.61	+1.0
2,404,463	-		AO353_11000	0.61	+0.4
2,404,463	-		AO353_11000	0.61	-1.5
2,404,463	-		AO353_11000	0.61	+0.3
2,404,463	-		AO353_11000	0.61	-0.7
2,404,463	-		AO353_11000	0.61	-0.2
2,404,463	-		AO353_11000	0.61	-0.1
2,404,535	+		AO353_11000	0.72	+0.4
2,404,535	+		AO353_11000	0.72	+1.4
2,404,535	+		AO353_11000	0.72	-0.0
2,404,535	+		AO353_11000	0.72	-0.3
2,404,536	-		AO353_11000	0.72	+2.3
2,404,536	-		AO353_11000	0.72	+0.3
2,404,536	-		AO353_11000	0.72	+1.1
2,404,536	-		AO353_11000	0.72	+0.3
2,404,536	-		AO353_11000	0.72	-1.9
2,404,545	+		AO353_11000	0.74	-2.8
2,404,545	+		AO353_11000	0.74	-1.0
2,404,546	-		AO353_11000	0.74	+1.7
2,404,636	-		AO353_11000	0.88	+0.6
2,404,636	-		AO353_11000	0.88	-0.1
2,404,750	-				+0.4
2,404,750	-				-0.1
2,404,790	+				-2.4
2,404,791	-				-0.9
2,404,791	-				+1.0
2,404,820	+		AO353_11005	0.12	-0.9
2,404,820	+		AO353_11005	0.12	-0.9
2,404,820	+		AO353_11005	0.12	-1.2
2,404,820	+		AO353_11005	0.12	+0.1
2,404,820	+		AO353_11005	0.12	+1.7
2,404,820	+		AO353_11005	0.12	-1.0
2,404,820	+		AO353_11005	0.12	+0.3
2,404,820	+		AO353_11005	0.12	-0.1
2,404,975	+		AO353_11005	0.28	-1.5
2,404,975	+		AO353_11005	0.28	-0.7
2,404,976	-		AO353_11005	0.28	-0.7
2,404,976	-		AO353_11005	0.28	-0.0
2,404,976	-		AO353_11005	0.28	-0.2
2,405,263	+		AO353_11005	0.59	-0.7
2,405,264	-		AO353_11005	0.59	+0.1
2,405,264	-		AO353_11005	0.59	-2.7
2,405,264	-		AO353_11005	0.59	-0.3
2,405,264	-		AO353_11005	0.59	+0.6
2,405,280	-		AO353_11005	0.61	-0.3
2,405,447	+		AO353_11005	0.79	+0.7
2,405,447	+		AO353_11005	0.79	-1.2
2,405,447	+		AO353_11005	0.79	+2.3
2,405,447	+		AO353_11005	0.79	-2.1
2,405,448	-		AO353_11005	0.79	-1.5
2,405,448	-		AO353_11005	0.79	-0.5
2,405,448	-		AO353_11005	0.79	-0.9
2,405,448	-		AO353_11005	0.79	-0.4
2,405,448	-		AO353_11005	0.79	-0.8
2,405,448	-		AO353_11005	0.79	-0.7
2,405,448	-		AO353_11005	0.79	-1.5
2,405,472	+		AO353_11005	0.81	+0.4
2,405,472	+		AO353_11005	0.81	+0.6
2,405,472	+		AO353_11005	0.81	-1.3
2,405,472	+		AO353_11005	0.81	+2.5
2,405,472	+		AO353_11005	0.81	+0.1
2,405,473	-		AO353_11005	0.81	+0.3
2,405,529	+		AO353_11005	0.87	+0.4
2,405,529	+		AO353_11005	0.87	+1.0
2,405,529	+		AO353_11005	0.87	-0.3
2,405,529	+		AO353_11005	0.87	-1.3
2,405,530	-		AO353_11005	0.87	-1.6
2,405,530	-		AO353_11005	0.87	-0.3
2,405,604	-				-0.0
2,405,604	-				+0.7
2,405,624	+				-1.8
2,405,624	+				+0.2
2,405,624	+				+1.0
2,405,624	+				-0.3
2,405,624	+				-2.0
2,405,624	+				+0.1
2,405,624	+				+1.3
2,405,624	+				-1.5
2,405,624	+				+0.8
2,405,624	+				-0.0
2,405,624	+				-0.6
2,405,624	+				-0.5
2,405,624	+				+0.5
2,405,625	-				-0.3
2,405,625	-				+1.0
2,405,625	-				-0.1
2,405,625	-				-0.3
2,405,625	-				+1.1
2,405,625	-				-0.5
2,405,625	-				-0.1
2,405,625	-				+0.1
2,405,625	-				-0.5
2,405,625	-				+0.5
2,405,625	-				-1.0
2,405,625	-				+0.3
2,405,625	-				-1.5
2,405,625	-				+0.7
2,405,625	-				+0.3
2,405,625	-				+0.3
2,405,625	-				-0.4
2,405,625	-				-0.5
2,405,625	-				-0.2
2,405,652	+				+1.3
2,405,652	+				-0.9
2,405,652	+				-2.0
2,405,652	+				-0.1
2,405,652	+				-0.3
2,405,652	+				+0.6
2,405,652	+				-0.3
2,405,652	+				+0.6
2,405,652	+				+0.0
2,405,652	+				-0.7
2,405,652	+				+0.5
2,405,653	-				+0.1
2,405,653	-				-2.2
2,405,653	-				+0.5
2,405,653	-				-0.3
2,405,710	+				+0.4
2,405,710	+				-0.5
2,405,710	+				+0.6
2,405,710	+				-0.3
2,405,711	-				-0.7
2,405,711	-				-0.0
2,405,711	-				+0.7
2,405,711	-				+0.5
2,405,711	-				-0.2
2,405,711	-				+0.5
2,405,769	+		AO353_11010	0.15	-0.2
2,405,769	+		AO353_11010	0.15	-0.7
2,405,812	+		AO353_11010	0.20	-0.0
2,405,812	+		AO353_11010	0.20	+1.0
2,405,812	+		AO353_11010	0.20	+1.1
2,405,812	+		AO353_11010	0.20	+0.9
2,405,812	+		AO353_11010	0.20	+0.1
2,405,812	+		AO353_11010	0.20	-0.4
2,405,812	+		AO353_11010	0.20	+1.2
2,405,812	+		AO353_11010	0.20	-0.2
2,405,812	+		AO353_11010	0.20	-0.5
2,405,812	+		AO353_11010	0.20	-0.1
2,405,812	+		AO353_11010	0.20	+1.0
2,405,813	-		AO353_11010	0.20	+0.4
2,405,813	-		AO353_11010	0.20	+2.9
2,405,813	-		AO353_11010	0.20	+0.5
2,405,813	-		AO353_11010	0.20	+0.0
2,405,813	-				+1.3
2,405,813	-		AO353_11010	0.20	-0.1
2,405,819	+		AO353_11010	0.21	+0.6
2,405,820	-		AO353_11010	0.21	-0.6
2,406,017	-		AO353_11010	0.46	-1.0
2,406,346	+		AO353_11010	0.87	-0.3
2,406,346	+		AO353_11010	0.87	-1.7
2,406,346	+		AO353_11010	0.87	-0.5
2,406,346	+		AO353_11010	0.87	+0.4
2,406,346	+		AO353_11010	0.87	+0.0
2,406,346	+		AO353_11010	0.87	-1.7
2,406,346	+		AO353_11010	0.87	-1.9
2,406,346	+		AO353_11010	0.87	-0.5
2,406,347	-		AO353_11010	0.87	-1.3
2,406,347	-		AO353_11010	0.87	+0.7
2,406,347	-		AO353_11010	0.87	-1.0
2,406,347	-		AO353_11010	0.87	+0.3
2,406,347	-		AO353_11010	0.87	+0.1
2,406,347	-		AO353_11010	0.87	+0.3
2,406,347	-		AO353_11010	0.87	+0.4
2,406,347	-		AO353_11010	0.87	-0.1
2,406,434	+				+0.3
2,406,435	-				-0.9
2,406,466	+				-0.8
2,406,467	-				-0.2