Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07875

Experiment: Choline chloride 358 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 358 mM
1,737,822	+		AO353_07865	0.79	-1.0
1,737,822	+		AO353_07865	0.79	-0.2
1,737,823	-		AO353_07865	0.79	-1.1
1,737,823	-		AO353_07865	0.79	+0.7
1,737,823	-		AO353_07865	0.79	+0.2
1,737,978	+				+0.7
1,737,979	-				+0.8
1,738,016	+				-2.0
1,738,046	+				+0.4
1,738,067	+				+0.1
1,738,067	+				-0.1
1,738,067	+				-0.3
1,738,067	+				+0.5
1,738,068	-				+0.6
1,738,068	-				-2.1
1,738,073	+				+0.3
1,738,073	+				+0.5
1,738,073	+				-0.2
1,738,073	+				-0.5
1,738,073	+				+0.5
1,738,073	+				-0.0
1,738,073	+				+0.9
1,738,073	+				+1.3
1,738,073	+				-0.5
1,738,073	+				+0.4
1,738,073	+				+0.1
1,738,073	+				+1.1
1,738,074	-				-0.5
1,738,074	-				-0.9
1,738,074	-				+1.1
1,738,074	-				+0.2
1,738,074	-				+4.1
1,738,074	-				+0.3
1,738,074	-				+1.1
1,738,074	-				-1.9
1,738,074	-				+0.1
1,738,100	+				+0.3
1,738,112	+				-0.3
1,738,112	+				+0.0
1,738,113	-				+0.9
1,738,175	+				-0.2
1,738,175	+				-0.0
1,738,176	-				+1.1
1,738,176	-				-0.3
1,738,176	-				-0.5
1,738,206	+				-0.2
1,738,207	-				+0.9
1,738,207	-				-0.6
1,738,207	-				+1.7
1,738,207	-				+0.1
1,738,207	-				-0.5
1,738,207	-				+0.8
1,738,207	-				-0.1
1,738,207	-				-0.9
1,738,207	-				-0.8
1,738,295	+		AO353_07870	0.12	-2.2
1,738,295	+		AO353_07870	0.12	+0.5
1,738,295	+		AO353_07870	0.12	+1.1
1,738,295	+		AO353_07870	0.12	+0.6
1,738,296	-		AO353_07870	0.12	+0.8
1,738,296	-		AO353_07870	0.12	-1.2
1,738,296	-		AO353_07870	0.12	+0.7
1,738,296	-		AO353_07870	0.12	-0.0
1,738,296	-		AO353_07870	0.12	+0.5
1,738,349	+		AO353_07870	0.24	+0.2
1,738,350	-		AO353_07870	0.24	-1.6
1,738,427	+		AO353_07870	0.41	+0.1
1,738,427	+		AO353_07870	0.41	-1.5
1,738,427	+		AO353_07870	0.41	+1.1
1,738,427	+		AO353_07870	0.41	+0.4
1,738,559	+		AO353_07870	0.70	+1.9
1,738,559	+		AO353_07870	0.70	-0.6
1,738,560	-				-0.9
1,738,560	-		AO353_07870	0.70	-0.6
1,738,560	-		AO353_07870	0.70	+0.4
1,738,580	+		AO353_07870	0.75	+0.8
1,738,580	+		AO353_07870	0.75	+0.8
1,738,580	+		AO353_07870	0.75	-0.6
1,738,580	+		AO353_07870	0.75	-0.6
1,738,580	+		AO353_07870	0.75	-1.2
1,738,580	+		AO353_07870	0.75	-0.5
1,738,580	+		AO353_07870	0.75	+1.6
1,738,581	-		AO353_07870	0.75	+0.4
1,738,581	-		AO353_07870	0.75	-0.5
1,738,581	-		AO353_07870	0.75	-0.6
1,738,581	-		AO353_07870	0.75	-1.5
1,738,581	-		AO353_07870	0.75	+1.1
1,738,581	-		AO353_07870	0.75	+1.5
1,738,581	-		AO353_07870	0.75	+0.1
1,738,581	-		AO353_07870	0.75	-0.9
1,738,581	-		AO353_07870	0.75	-0.5
1,738,610	+		AO353_07870	0.81	-0.9
1,738,610	+		AO353_07870	0.81	-0.5
1,738,611	-		AO353_07870	0.82	-0.2
1,738,611	-		AO353_07870	0.82	+2.4
1,738,613	+		AO353_07870	0.82	-0.5
1,738,623	-		AO353_07870	0.84	-0.0
1,738,649	+				-0.5
1,738,649	+				-0.9
1,738,649	+				-0.0
1,738,649	+				+0.0
1,738,650	-				+0.3
1,738,650	-				-0.9
1,738,650	-				-0.5
1,738,691	+				+0.2
1,738,745	-				+0.9
1,738,914	-		AO353_07875	0.60	-0.1
1,738,982	-		AO353_07875	0.82	-2.0
1,738,990	+		AO353_07875	0.85	+0.3
1,738,990	+		AO353_07875	0.85	+0.1
1,738,990	+		AO353_07875	0.85	-1.5
1,738,990	+		AO353_07875	0.85	-0.1
1,738,991	-		AO353_07875	0.86	+1.5
1,738,991	-		AO353_07875	0.86	-1.0
1,739,003	-		AO353_07875	0.90	-1.7
1,739,058	+				-1.2
1,739,058	+				-1.5
1,739,059	-				-1.9
1,739,059	-				+0.2
1,739,059	-				+1.1
1,739,059	-				+0.3
1,739,066	-				+0.1
1,739,082	+				+0.5
1,739,082	+				+0.0
1,739,082	+				+1.1
1,739,082	+				-0.1
1,739,082	+				-1.3
1,739,082	+				+2.7
1,739,083	-				-0.1
1,739,083	-				-0.1
1,739,113	-		AO353_07880	0.11	-1.2
1,739,125	+		AO353_07880	0.14	-1.2
1,739,125	+		AO353_07880	0.14	+0.3
1,739,125	+		AO353_07880	0.14	+0.8
1,739,125	+		AO353_07880	0.14	+0.5
1,739,125	+		AO353_07880	0.14	-1.3
1,739,125	+		AO353_07880	0.14	-0.2
1,739,125	+		AO353_07880	0.14	+1.1
1,739,125	+		AO353_07880	0.14	-0.7
1,739,126	-		AO353_07880	0.14	+0.0
1,739,126	-		AO353_07880	0.14	+0.5
1,739,126	-		AO353_07880	0.14	+0.3
1,739,126	-		AO353_07880	0.14	-0.5
1,739,126	-		AO353_07880	0.14	+0.0
1,739,126	-		AO353_07880	0.14	-0.1
1,739,126	-		AO353_07880	0.14	+0.2
1,739,126	-		AO353_07880	0.14	+0.5
1,739,126	-		AO353_07880	0.14	-0.3
1,739,126	-		AO353_07880	0.14	-0.3
1,739,126	-		AO353_07880	0.14	-0.1
1,739,126	-		AO353_07880	0.14	+0.2
1,739,126	-		AO353_07880	0.14	+0.4
1,739,126	-		AO353_07880	0.14	-1.2
1,739,142	+		AO353_07880	0.17	-1.5
1,739,142	+		AO353_07880	0.17	+0.7
1,739,142	+		AO353_07880	0.17	+1.5
1,739,142	+		AO353_07880	0.17	+0.7
1,739,142	+		AO353_07880	0.17	-1.5
1,739,142	+		AO353_07880	0.17	+0.3
1,739,143	-		AO353_07880	0.17	+0.8
1,739,143	-		AO353_07880	0.17	-1.5
1,739,143	-		AO353_07880	0.17	-1.2
1,739,279	+		AO353_07880	0.45	+1.1
1,739,280	-		AO353_07880	0.45	-0.1
1,739,280	-		AO353_07880	0.45	+1.1
1,739,376	+		AO353_07880	0.65	+0.0
1,739,376	+		AO353_07880	0.65	-1.9
1,739,376	+		AO353_07880	0.65	-0.6
1,739,376	+		AO353_07880	0.65	-0.6
1,739,376	+		AO353_07880	0.65	-0.2
1,739,377	-		AO353_07880	0.65	-0.1
1,739,377	-		AO353_07880	0.65	-0.5
1,739,400	+		AO353_07880	0.70	-1.7
1,739,401	-		AO353_07880	0.70	-0.8
1,739,401	-		AO353_07880	0.70	-1.5
1,739,406	+		AO353_07880	0.71	-0.5
1,739,406	+		AO353_07880	0.71	-0.9
1,739,406	+		AO353_07880	0.71	+0.7
1,739,406	+		AO353_07880	0.71	+1.1
1,739,407	-		AO353_07880	0.71	+0.7
1,739,407	-		AO353_07880	0.71	+0.5
1,739,407	-		AO353_07880	0.71	-0.1
1,739,407	-		AO353_07880	0.71	+3.1
1,739,407	-		AO353_07880	0.71	+1.1
1,739,460	+		AO353_07880	0.82	+0.3
1,739,460	+		AO353_07880	0.82	-0.6
1,739,460	+		AO353_07880	0.82	+2.7
1,739,460	+		AO353_07880	0.82	+1.4
1,739,461	-		AO353_07880	0.82	+0.4
1,739,533	-				+0.1
1,739,533	-				+0.8
1,739,533	-				-2.3
1,739,533	-				-0.9
1,739,584	-				+2.1
1,739,584	-				-0.3
1,739,584	-				+0.1
1,739,682	+				+1.1
1,739,682	+				+0.5
1,739,683	-				+1.8
1,739,683	-				+0.1
1,739,683	-				-0.5
1,739,683	-				-0.2
1,739,683	-				-0.9
1,739,683	-				-0.9
1,739,683	-				-2.2
1,739,712	+				-0.1
1,739,713	-				+1.1
1,739,870	+		AO353_07885	0.13	-1.1
1,739,953	+		AO353_07885	0.17	+0.2
1,739,953	+		AO353_07885	0.17	+0.1
1,739,954	-		AO353_07885	0.17	-0.2
1,739,954	-		AO353_07885	0.17	-2.5
1,739,954	-		AO353_07885	0.17	-0.7
1,739,954	-		AO353_07885	0.17	+0.1
1,739,976	-		AO353_07885	0.18	-0.5
1,739,976	-		AO353_07885	0.18	+0.9
1,739,976	-		AO353_07885	0.18	+0.8
1,739,976	-		AO353_07885	0.18	-0.8