Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07810

Experiment: Choline chloride 358 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 358 mM
1,721,392	+		AO353_07805	0.57	-2.5
1,721,392	+		AO353_07805	0.57	-2.3
1,721,392	+		AO353_07805	0.57	-1.2
1,721,393	-		AO353_07805	0.57	-0.9
1,721,393	-		AO353_07805	0.57	-1.2
1,721,393	-		AO353_07805	0.57	-0.7
1,721,393	-		AO353_07805	0.57	-2.6
1,721,393	-		AO353_07805	0.57	-3.3
1,721,520	+		AO353_07805	0.66	-0.5
1,721,520	+		AO353_07805	0.66	+0.1
1,721,572	+		AO353_07805	0.69	-0.7
1,721,572	+		AO353_07805	0.69	-3.1
1,721,572	+		AO353_07805	0.69	-0.2
1,721,586	+		AO353_07805	0.70	-1.5
1,721,586	+		AO353_07805	0.70	-1.5
1,721,587	-		AO353_07805	0.70	-1.9
1,721,587	-		AO353_07805	0.70	+0.6
1,721,746	+		AO353_07805	0.81	-0.5
1,721,746	+		AO353_07805	0.81	-1.2
1,721,746	+		AO353_07805	0.81	-1.5
1,721,747	-		AO353_07805	0.81	-0.5
1,721,747	-		AO353_07805	0.81	-1.2
1,721,747	-		AO353_07805	0.81	-1.5
1,721,747	-		AO353_07805	0.81	+0.5
1,721,865	+		AO353_07805	0.89	-1.8
1,721,920	+				-1.1
1,722,254	+				+0.1
1,722,255	-				-1.3
1,722,255	-				-3.0
1,722,260	+				-1.5
1,722,260	+				-0.5
1,722,260	+				-1.6
1,722,260	+				-1.7
1,722,260	+				-0.9
1,722,260	+				-0.9
1,722,260	+				-0.9
1,722,260	+				-1.3
1,722,260	+				-0.5
1,722,260	+				-0.9
1,722,260	+				-1.3
1,722,260	+				-0.6
1,722,260	+				+0.7
1,722,260	+				-2.5
1,722,260	+				+0.1
1,722,261	-				-2.6
1,722,261	-				-0.5
1,722,261	-				-2.8
1,722,261	-				+0.3
1,722,261	-				-2.2
1,722,261	-				-3.3
1,722,261	-				-1.2
1,722,261	-				-1.7
1,722,261	-				-2.1
1,722,261	-				+0.5
1,722,261	-				-3.6
1,722,261	-				-1.7
1,722,369	+				-1.1
1,722,369	+				+2.1
1,722,425	+		AO353_07810	0.11	-1.8
1,722,426	-		AO353_07810	0.11	-2.7
1,722,438	-		AO353_07810	0.12	-3.6
1,722,533	+		AO353_07810	0.17	-1.2
1,722,533	+		AO353_07810	0.17	-1.2
1,722,533	+		AO353_07810	0.17	-1.9
1,722,533	+		AO353_07810	0.17	-2.1
1,722,533	+		AO353_07810	0.17	-1.9
1,722,533	+		AO353_07810	0.17	-0.5
1,722,533	+		AO353_07810	0.17	-1.8
1,722,533	+		AO353_07810	0.17	-0.3
1,722,533	+		AO353_07810	0.17	-1.6
1,722,533	+		AO353_07810	0.17	-2.3
1,722,533	+		AO353_07810	0.17	-2.2
1,722,533	+		AO353_07810	0.17	-1.2
1,722,533	+		AO353_07810	0.17	-1.0
1,722,534	-		AO353_07810	0.17	-1.5
1,722,534	-		AO353_07810	0.17	-2.3
1,722,534	-		AO353_07810	0.17	-0.5
1,722,534	-		AO353_07810	0.17	-1.4
1,722,534	-		AO353_07810	0.17	+2.1
1,722,534	-		AO353_07810	0.17	-2.7
1,722,534	-		AO353_07810	0.17	-1.8
1,722,534	-		AO353_07810	0.17	-3.0
1,722,534	-		AO353_07810	0.17	+0.3
1,722,534	-		AO353_07810	0.17	-1.1
1,722,534	-		AO353_07810	0.17	-2.9
1,722,557	+		AO353_07810	0.18	-1.2
1,722,557	+		AO353_07810	0.18	-1.5
1,722,558	-		AO353_07810	0.19	-1.7
1,722,558	-		AO353_07810	0.19	-2.3
1,722,599	+		AO353_07810	0.21	-1.5
1,722,599	+		AO353_07810	0.21	-1.2
1,722,599	+		AO353_07810	0.21	-1.1
1,722,599	+		AO353_07810	0.21	+0.7
1,722,600	-		AO353_07810	0.21	-1.5
1,722,617	+		AO353_07810	0.22	-0.7
1,722,618	-		AO353_07810	0.22	-1.9
1,722,659	+		AO353_07810	0.24	-1.9
1,722,659	+		AO353_07810	0.24	-1.5
1,722,697	+		AO353_07810	0.27	-1.2
1,722,697	+		AO353_07810	0.27	+0.1
1,722,744	+		AO353_07810	0.29	-1.7
1,722,744	+		AO353_07810	0.29	-1.3
1,722,744	+		AO353_07810	0.29	-1.5
1,722,744	+		AO353_07810	0.29	-1.1
1,722,744	+		AO353_07810	0.29	-3.1
1,722,744	+		AO353_07810	0.29	-2.6
1,722,744	+		AO353_07810	0.29	-1.5
1,722,745	-		AO353_07810	0.30	+1.9
1,722,745	-		AO353_07810	0.30	-1.2
1,722,745	-		AO353_07810	0.30	-2.2
1,722,745	-		AO353_07810	0.30	-2.6
1,722,745	-		AO353_07810	0.30	-2.9
1,722,745	-		AO353_07810	0.30	-0.2
1,722,827	-		AO353_07810	0.34	-0.3
1,722,951	+		AO353_07810	0.42	-2.1
1,722,951	+		AO353_07810	0.42	-1.8
1,722,951	+		AO353_07810	0.42	-1.3
1,722,951	+		AO353_07810	0.42	-2.3
1,722,952	-		AO353_07810	0.42	-2.8
1,722,952	-		AO353_07810	0.42	-1.4
1,722,952	-		AO353_07810	0.42	-2.8
1,722,952	-		AO353_07810	0.42	-0.5
1,722,956	+		AO353_07810	0.42	-2.2
1,723,154	+		AO353_07810	0.54	-2.2
1,723,154	+		AO353_07810	0.54	-1.9
1,723,154	+		AO353_07810	0.54	-1.5
1,723,155	-		AO353_07810	0.54	-1.7
1,723,155	-		AO353_07810	0.54	-1.7
1,723,163	+		AO353_07810	0.54	+0.1
1,723,164	-		AO353_07810	0.54	-0.1
1,723,164	-		AO353_07810	0.54	-0.9
1,723,188	+		AO353_07810	0.56	-0.8
1,723,208	+		AO353_07810	0.57	-3.8
1,723,208	+		AO353_07810	0.57	-0.9
1,723,209	-		AO353_07810	0.57	-1.3
1,723,355	-		AO353_07810	0.65	-1.7
1,723,355	-		AO353_07810	0.65	-2.6
1,723,355	-		AO353_07810	0.65	-1.5
1,723,358	+		AO353_07810	0.65	-1.7
1,723,358	+		AO353_07810	0.65	-1.3
1,723,358	+		AO353_07810	0.65	-1.4
1,723,358	+		AO353_07810	0.65	-1.6
1,723,358	+		AO353_07810	0.65	-2.2
1,723,358	+		AO353_07810	0.65	-0.8
1,723,358	+		AO353_07810	0.65	-1.7
1,723,359	-		AO353_07810	0.66	-0.2
1,723,359	-		AO353_07810	0.66	-0.7
1,723,359	-		AO353_07810	0.66	-1.7
1,723,359	-		AO353_07810	0.66	+0.6
1,723,359	-		AO353_07810	0.66	-1.5
1,723,359	-		AO353_07810	0.66	-2.0
1,723,359	-		AO353_07810	0.66	-0.9
1,723,359	-		AO353_07810	0.66	+0.1
1,723,359	-		AO353_07810	0.66	-1.9
1,723,359	-		AO353_07810	0.66	+0.0
1,723,487	+		AO353_07810	0.73	-1.6
1,723,487	+		AO353_07810	0.73	-0.9
1,723,487	+		AO353_07810	0.73	-1.3
1,723,487	+		AO353_07810	0.73	-0.5
1,723,487	+		AO353_07810	0.73	+0.7
1,723,487	+		AO353_07810	0.73	-1.5
1,723,487	+		AO353_07810	0.73	-3.1
1,723,487	+		AO353_07810	0.73	-1.2
1,723,487	+		AO353_07810	0.73	-0.9
1,723,487	+		AO353_07810	0.73	-0.7
1,723,488	-		AO353_07810	0.73	+0.1
1,723,488	-		AO353_07810	0.73	-2.3
1,723,488	-		AO353_07810	0.73	-1.2
1,723,488	-		AO353_07810	0.73	-0.9
1,723,488	-		AO353_07810	0.73	-2.6
1,723,488	-		AO353_07810	0.73	-2.1
1,723,488	-		AO353_07810	0.73	-1.1
1,723,488	-		AO353_07810	0.73	-1.3
1,723,877	+				-0.9
1,723,877	+				-1.7
1,723,877	+				-2.1
1,723,877	+				-1.7
1,723,877	+				-0.9
1,723,877	+				-1.6
1,723,877	+				-1.5
1,723,877	+				-2.6
1,723,878	-				-2.7
1,723,878	-				-1.2
1,723,878	-				-2.3
1,723,878	-				-0.5
1,723,878	-				-0.7
1,723,878	-				-2.6
1,723,878	-				-1.1
1,723,878	-				-2.3
1,723,878	-				-1.7
1,723,878	-				-0.5
1,723,880	+				-0.2
1,723,880	+				-1.1
1,723,881	-				-1.9
1,723,881	-				-0.9
1,723,881	-				-1.9
1,723,881	-				-1.7
1,723,881	-				-2.6
1,723,943	+				-0.9
1,723,943	+				-1.1
1,723,966	+				-1.2
1,723,966	+				+0.2
1,723,966	+				-1.3
1,723,967	-				+1.8
1,723,967	-				+0.8
1,723,967	-				-1.0
1,724,010	-				-0.5
1,724,025	+				-1.0
1,724,148	-				+1.1
1,724,320	+		AO353_07815	0.19	-0.8
1,724,321	-		AO353_07815	0.19	+1.1
1,724,368	-		AO353_07815	0.24	+0.4
1,724,435	+		AO353_07815	0.31	+0.6
1,724,454	+		AO353_07815	0.33	-0.5
1,724,465	-		AO353_07815	0.34	+0.3
1,724,563	+		AO353_07815	0.44	-0.6
1,724,563	+		AO353_07815	0.44	-1.7
1,724,563	+		AO353_07815	0.44	+1.4
1,724,564	-		AO353_07815	0.44	+1.4
1,724,564	-		AO353_07815	0.44	+0.5
1,724,564	-		AO353_07815	0.44	-1.2
1,724,579	+		AO353_07815	0.46	+0.5
1,724,579	+		AO353_07815	0.46	+0.8
1,724,580	-		AO353_07815	0.46	-0.9
1,724,580	-		AO353_07815	0.46	-0.9
1,724,585	-		AO353_07815	0.46	+1.3
1,724,585	-		AO353_07815	0.46	-0.1
1,724,633	-		AO353_07815	0.51	-0.2
1,724,635	+		AO353_07815	0.51	-2.9
1,724,764	+		AO353_07815	0.64	-0.5
1,724,776	+		AO353_07815	0.66	+1.1
1,724,776	+		AO353_07815	0.66	+1.0
1,724,776	+		AO353_07815	0.66	-0.6
1,724,776	+		AO353_07815	0.66	+0.8
1,724,777	-		AO353_07815	0.66	+0.6
1,724,777	-		AO353_07815	0.66	-1.4
1,724,777	-		AO353_07815	0.66	-1.0
1,724,777	-		AO353_07815	0.66	-0.5
1,724,777	-		AO353_07815	0.66	+0.3
1,724,818	-		AO353_07815	0.70	-0.8
1,724,858	+		AO353_07815	0.74	-2.8
1,724,858	+		AO353_07815	0.74	+0.1
1,724,858	+		AO353_07815	0.74	-1.7
1,724,858	+		AO353_07815	0.74	+0.1
1,724,859	-		AO353_07815	0.74	+0.6
1,724,870	+		AO353_07815	0.75	-0.9
1,724,871	-		AO353_07815	0.75	+0.3