Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07800

Experiment: Choline chloride 358 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 358 mM
1,718,883	-		AO353_07795	0.73	+0.5
1,718,914	-		AO353_07795	0.74	+2.1
1,718,957	+				+0.1
1,718,957	+		AO353_07795	0.76	-0.3
1,718,957	+		AO353_07795	0.76	-0.0
1,718,957	+		AO353_07795	0.76	-0.8
1,718,957	+		AO353_07795	0.76	-1.5
1,718,958	-		AO353_07795	0.77	-1.2
1,718,958	-		AO353_07795	0.77	-1.8
1,718,958	-		AO353_07795	0.77	-1.2
1,718,958	-		AO353_07795	0.77	-1.0
1,718,958	-		AO353_07795	0.77	-0.8
1,719,002	-		AO353_07795	0.79	-1.3
1,719,002	-		AO353_07795	0.79	-1.6
1,719,056	+		AO353_07795	0.81	-0.2
1,719,056	+		AO353_07795	0.81	-0.4
1,719,056	+		AO353_07795	0.81	-0.4
1,719,057	-		AO353_07795	0.81	-0.2
1,719,057	-		AO353_07795	0.81	-1.3
1,719,087	-		AO353_07795	0.83	-0.5
1,719,087	-		AO353_07795	0.83	-0.1
1,719,140	+		AO353_07795	0.86	+0.7
1,719,140	+		AO353_07795	0.86	+0.4
1,719,141	-		AO353_07795	0.86	+0.9
1,719,141	-		AO353_07795	0.86	-2.3
1,719,141	-		AO353_07795	0.86	+0.6
1,719,188	+		AO353_07795	0.88	-0.4
1,719,189	-		AO353_07795	0.88	-1.2
1,719,218	-		AO353_07795	0.90	+0.3
1,719,218	-		AO353_07795	0.90	+0.5
1,719,224	+		AO353_07795	0.90	-1.9
1,719,224	+		AO353_07795	0.90	-0.4
1,719,224	+		AO353_07795	0.90	+0.8
1,719,224	+		AO353_07795	0.90	+1.3
1,719,224	+		AO353_07795	0.90	-1.1
1,719,225	-		AO353_07795	0.90	+0.1
1,719,225	-		AO353_07795	0.90	-1.3
1,719,225	-		AO353_07795	0.90	-1.1
1,719,245	+				-0.6
1,719,245	+				-0.4
1,719,245	+				-0.3
1,719,245	+				-1.0
1,719,245	+				-1.2
1,719,245	+				+0.6
1,719,245	+				-2.6
1,719,245	+				+1.5
1,719,245	+				+0.4
1,719,245	+				-1.5
1,719,245	+				+0.4
1,719,245	+				+0.7
1,719,245	+				-0.8
1,719,245	+				+0.4
1,719,245	+				-1.2
1,719,245	+				-0.2
1,719,245	+				+0.1
1,719,245	+				+0.1
1,719,245	+				+1.9
1,719,245	+				+0.0
1,719,245	+				-0.5
1,719,245	+				-1.5
1,719,245	+				-1.7
1,719,245	+				-0.4
1,719,246	-				+0.3
1,719,246	-				-0.1
1,719,246	-				-0.1
1,719,246	-				+0.1
1,719,246	-				+0.4
1,719,246	-				+2.1
1,719,246	-				+0.8
1,719,246	-				+0.7
1,719,246	-				+0.1
1,719,246	-				-0.1
1,719,246	-				-0.0
1,719,248	+				+0.6
1,719,248	+				+1.1
1,719,249	-				+0.1
1,719,249	-				-0.1
1,719,362	+				+0.0
1,719,362	+				+0.5
1,719,362	+				+0.7
1,719,362	+				+0.2
1,719,362	+				-1.9
1,719,362	+				-0.3
1,719,362	+				-0.2
1,719,362	+				-0.2
1,719,363	-				-0.0
1,719,363	-				+1.4
1,719,363	-				-0.7
1,719,363	-				-1.2
1,719,363	-				+1.6
1,719,363	-				-1.1
1,719,406	+				+0.7
1,719,406	+				-0.6
1,719,406	+				+0.6
1,719,406	+				-1.2
1,719,406	+				-1.2
1,719,406	+				-0.2
1,719,407	-				-0.4
1,719,407	-				-0.1
1,719,407	-				-0.9
1,719,407	-				-0.6
1,719,407	-				-0.9
1,719,407	-				-0.3
1,719,408	+				+1.1
1,719,408	+				-0.6
1,719,408	+				-0.7
1,719,408	+				+0.3
1,719,408	+				-0.3
1,719,408	+				-1.4
1,719,408	+				-0.5
1,719,408	+				-0.9
1,719,409	-				+0.9
1,719,409	-				-0.9
1,719,409	-				+0.1
1,719,409	-				+1.1
1,719,409	-				+1.1
1,719,409	-				-0.5
1,719,409	-				+0.0
1,719,409	-				-0.1
1,719,409	-				+0.3
1,719,491	+				+1.1
1,719,516	+				-0.5
1,719,516	+				+0.0
1,719,516	+				-0.2
1,719,516	+				+0.1
1,719,516	+				-0.5
1,719,516	+				+1.1
1,719,516	+				-0.5
1,719,516	+				-1.9
1,719,517	-				-1.3
1,719,517	-				-0.3
1,719,517	-				-0.1
1,719,518	+				-1.4
1,719,518	+				-0.9
1,719,518	+				+1.1
1,719,518	+				+1.3
1,719,518	+				+0.5
1,719,518	+				-0.5
1,719,518	+				-0.2
1,719,518	+				-1.9
1,719,518	+				-0.2
1,719,518	+				-0.5
1,719,518	+				-0.1
1,719,518	+				+0.1
1,719,518	+				+0.5
1,719,518	+				-0.6
1,719,519	-				+1.9
1,719,519	-				+2.0
1,719,519	-				-0.2
1,719,519	-				-0.2
1,719,519	-				-1.2
1,719,519	-				-0.1
1,719,519	-				-0.1
1,719,519	-				-0.1
1,719,519	-				+0.5
1,719,519	-				-0.5
1,719,519	-				-0.9
1,719,519	-				-0.8
1,719,519	-				-0.3
1,719,519	-				+0.4
1,719,519	-				+1.3
1,719,519	-				+0.4
1,719,519	-				-1.5
1,719,519	-				-0.8
1,719,519	-				-1.7
1,719,519	-				-0.6
1,719,519	-				-0.8
1,719,519	-				+1.5
1,719,590	+				+1.0
1,719,590	+				+0.4
1,719,591	-				+0.1
1,719,591	-				+1.1
1,719,627	+				+0.2
1,719,627	+				+0.7
1,719,627	+				+0.1
1,719,628	-				+2.7
1,719,628	-				-1.1
1,719,628	-				-0.5
1,719,628	-				-0.2
1,719,714	+				-1.8
1,719,714	+				+0.1
1,719,714	+				-0.9
1,719,714	+				-2.1
1,719,714	+				+0.1
1,719,715	-				-0.3
1,719,715	-				-0.7
1,719,715	-				+0.2
1,719,790	+				-0.8
1,719,791	-				-0.5
1,719,837	+				-0.9
1,719,837	+				-0.2
1,719,998	-		AO353_07800	0.24	-1.9
1,719,998	-		AO353_07800	0.24	-2.0
1,720,095	+		AO353_07800	0.40	-0.2
1,720,095	+		AO353_07800	0.40	+0.5
1,720,095	+		AO353_07800	0.40	+0.7
1,720,095	+		AO353_07800	0.40	+0.1
1,720,096	-		AO353_07800	0.40	-1.7
1,720,096	-		AO353_07800	0.40	-1.4
1,720,096	-		AO353_07800	0.40	-2.2
1,720,096	-		AO353_07800	0.40	-0.5
1,720,096	-		AO353_07800	0.40	-0.5
1,720,096	-		AO353_07800	0.40	-0.9
1,720,217	+		AO353_07800	0.60	+0.5
1,720,217	+		AO353_07800	0.60	+0.2
1,720,217	+		AO353_07800	0.60	+0.0
1,720,218	-		AO353_07800	0.60	-2.9
1,720,218	-		AO353_07800	0.60	-3.0
1,720,218	-		AO353_07800	0.60	-1.5
1,720,218	-		AO353_07800	0.60	-3.2
1,720,252	+		AO353_07800	0.66	+2.7
1,720,252	+		AO353_07800	0.66	+0.6
1,720,406	-				+1.1
1,720,411	+				+1.5
1,720,411	+				-0.3
1,720,411	+				+0.9
1,720,411	+				-0.3
1,720,411	+				+0.4
1,720,411	+				+0.1
1,720,411	+				+0.1
1,720,411	+				+0.1
1,720,411	+				+1.1
1,720,412	-				-1.7
1,720,412	-				-0.9
1,720,412	-				-1.2
1,720,412	-				-1.9
1,720,412	-				-0.5
1,720,412	-				-1.5
1,720,412	-				-0.5
1,720,412	-				-2.2
1,720,412	-				-1.5
1,720,412	-				-2.5
1,720,412	-				-1.7
1,720,412	-				-3.1
1,720,413	+				+0.1
1,720,413	+				+0.7
1,720,413	+				+0.7
1,720,413	+				+2.0
1,720,413	+				+0.3
1,720,413	+				+0.1
1,720,413	+				+0.7
1,720,413	+				-0.6
1,720,413	+				+1.6
1,720,413	+				+0.6
1,720,413	+				-0.8
1,720,413	+				-0.5
1,720,413	+				-1.5
1,720,413	+				+0.6
1,720,414	-				-0.9
1,720,414	-				-1.5
1,720,414	-				-1.5
1,720,414	-				-1.2
1,720,414	-				-2.9
1,720,414	-				-0.9
1,720,414	-				-2.0
1,720,414	-				-0.5
1,720,414	-				-1.3
1,720,414	-				-1.7
1,720,414	-				-0.9
1,720,414	-				-2.3
1,720,445	+				-1.1
1,720,445	+				-1.1
1,720,445	+				-0.1
1,720,445	+				-0.2
1,720,456	+				+0.6
1,720,456	+				-0.4
1,720,457	-				-0.8
1,720,457	-				-1.5
1,720,503	-				-2.1
1,720,530	-				+0.1
1,720,533	+				-1.2
1,720,533	+				-1.2
1,720,533	+				-0.2
1,720,533	+				+0.4
1,720,533	+				-1.7
1,720,533	+				-0.0
1,720,533	+				-0.8
1,720,533	+				-0.3
1,720,533	+				-0.2
1,720,533	+				+0.4
1,720,533	+				+0.1
1,720,533	+				+0.5
1,720,533	+				+0.5
1,720,534	-				-2.1
1,720,534	-				-1.5
1,720,534	-				-0.5
1,720,534	-				-0.1
1,720,534	-				+0.3
1,720,534	-				-2.2
1,720,534	-				-2.3
1,720,534	-				-1.1
1,720,534	-				-2.2
1,720,554	+				-2.1
1,720,554	+				-0.5
1,720,554	+				-1.5
1,720,554	+				+2.4
1,720,554	+				-1.1
1,720,555	-				-1.2
1,720,582	+				-2.3
1,720,582	+				+0.1
1,720,583	-				-1.2
1,720,583	-				-1.5
1,720,597	+				-1.7
1,720,597	+				-1.9
1,720,846	+		AO353_07805	0.20	-1.5
1,720,846	+		AO353_07805	0.20	-1.4
1,720,846	+		AO353_07805	0.20	-3.1
1,720,862	-		AO353_07805	0.21	+0.1
1,720,862	-		AO353_07805	0.21	-1.0
1,720,889	+		AO353_07805	0.23	+0.1
1,720,889	+		AO353_07805	0.23	-0.5
1,720,889	+		AO353_07805	0.23	-0.9
1,720,890	-		AO353_07805	0.23	-0.9
1,720,890	-		AO353_07805	0.23	-2.1
1,720,890	-		AO353_07805	0.23	+0.1
1,720,897	+		AO353_07805	0.23	+1.1
1,720,897	+		AO353_07805	0.23	-1.9
1,720,897	+		AO353_07805	0.23	-1.5
1,720,898	-		AO353_07805	0.23	-2.1
1,720,898	-		AO353_07805	0.23	-1.1
1,720,898	-		AO353_07805	0.23	-1.7
1,720,900	+		AO353_07805	0.23	-1.1
1,720,900	+		AO353_07805	0.23	-0.9
1,720,900	+		AO353_07805	0.23	-3.2
1,720,901	-		AO353_07805	0.23	-1.7
1,720,901	-		AO353_07805	0.23	-3.2
1,720,901	-		AO353_07805	0.23	-1.5
1,720,901	-		AO353_07805	0.23	-1.2
1,720,901	-		AO353_07805	0.23	-1.0
1,720,964	-		AO353_07805	0.28	-0.2
1,720,964	-		AO353_07805	0.28	-1.6
1,721,014	+		AO353_07805	0.31	-0.7
1,721,015	-		AO353_07805	0.31	-3.3
1,721,015	-		AO353_07805	0.31	-1.7
1,721,128	+		AO353_07805	0.39	-0.1
1,721,128	+		AO353_07805	0.39	-2.2
1,721,128	+		AO353_07805	0.39	-2.1
1,721,128	+		AO353_07805	0.39	-2.6
1,721,129	-		AO353_07805	0.39	-2.9
1,721,129	-		AO353_07805	0.39	-1.2
1,721,129	-		AO353_07805	0.39	-0.5
1,721,392	+		AO353_07805	0.57	-2.5
1,721,392	+		AO353_07805	0.57	-2.3
1,721,392	+		AO353_07805	0.57	-1.2
1,721,393	-		AO353_07805	0.57	-0.9
1,721,393	-		AO353_07805	0.57	-1.2
1,721,393	-		AO353_07805	0.57	-0.7
1,721,393	-		AO353_07805	0.57	-2.6
1,721,393	-		AO353_07805	0.57	-3.3