Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2367

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,431,960	-	prfC	Synpcc7942_2365	0.67	-1.7
2,431,971	-	prfC	Synpcc7942_2365	0.68	+1.7
2,431,987	-	prfC	Synpcc7942_2365	0.69	-2.7
2,431,994	-	prfC	Synpcc7942_2365	0.69	-2.9
2,432,041	+	prfC	Synpcc7942_2365	0.72	-1.3
2,432,045	+	prfC	Synpcc7942_2365	0.72	-0.1
2,432,097	+	prfC	Synpcc7942_2365	0.75	-3.7
2,432,105	-	prfC	Synpcc7942_2365	0.76	-3.1
2,432,113	+	prfC	Synpcc7942_2365	0.76	-0.8
2,432,121	-	prfC	Synpcc7942_2365	0.77	-0.1
2,432,125	+	prfC	Synpcc7942_2365	0.77	-2.7
2,432,128	-	prfC	Synpcc7942_2365	0.77	-4.4
2,432,136	+	prfC	Synpcc7942_2365	0.78	-2.7
2,432,152	+	prfC	Synpcc7942_2365	0.79	-2.1
2,432,180	+	prfC	Synpcc7942_2365	0.80	-0.1
2,432,227	-	prfC	Synpcc7942_2365	0.83	-2.4
2,432,263	-	prfC	Synpcc7942_2365	0.85	-0.1
2,432,293	+	prfC	Synpcc7942_2365	0.87	-1.7
2,432,313	+	prfC	Synpcc7942_2365	0.88	-1.7
2,432,315	+	prfC	Synpcc7942_2365	0.88	-2.7
2,432,353	+				-1.1
2,432,356	+				-0.5
2,432,371	+				-1.7
2,432,380	+				-1.7
2,432,380	+				-1.4
2,432,396	+				-2.4
2,432,396	+				-1.7
2,432,415	+				-1.4
2,432,512	-				+0.8
2,432,515	+				-0.1
2,432,515	+				+0.7
2,432,523	-				-0.3
2,432,541	+				-0.1
2,432,544	+				+1.9
2,432,594	-				+0.2
2,432,601	+				+1.2
2,432,601	-				-0.3
2,432,606	-				-3.4
2,432,606	-				+0.2
2,432,609	-				+0.8
2,432,645	-		Synpcc7942_2366	0.16	-0.1
2,432,663	+		Synpcc7942_2366	0.22	-0.1
2,432,697	+		Synpcc7942_2366	0.34	+0.4
2,432,699	+		Synpcc7942_2366	0.35	+0.5
2,432,746	-		Synpcc7942_2366	0.52	+0.2
2,432,748	+		Synpcc7942_2366	0.53	-0.1
2,432,754	+		Synpcc7942_2366	0.55	-1.9
2,432,754	+		Synpcc7942_2366	0.55	+1.1
2,432,754	+		Synpcc7942_2366	0.55	-0.7
2,432,754	+		Synpcc7942_2366	0.55	+1.2
2,432,756	-		Synpcc7942_2366	0.56	+0.2
2,432,756	-		Synpcc7942_2366	0.56	+1.5
2,432,762	-		Synpcc7942_2366	0.58	-0.5
2,432,762	-				-0.1
2,432,787	-		Synpcc7942_2366	0.67	+1.6
2,432,787	-				+0.5
2,432,793	-		Synpcc7942_2366	0.69	-0.6
2,432,795	-		Synpcc7942_2366	0.70	-0.9
2,432,856	-				+1.5
2,432,908	+				-0.9
2,432,908	+				+0.4
2,432,910	+				+0.3
2,432,916	-				-0.1
2,432,956	+				-1.7
2,432,964	-				-0.7
2,432,964	-				-0.2
2,432,964	-				-1.2
2,432,964	-				-1.1
2,432,985	+				+0.0
2,432,985	+				-0.1
2,433,019	+		Synpcc7942_2367	0.13	-2.4
2,433,034	-		Synpcc7942_2367	0.16	-0.2
2,433,053	+		Synpcc7942_2367	0.20	-1.3
2,433,053	-		Synpcc7942_2367	0.20	-0.7
2,433,059	-		Synpcc7942_2367	0.21	-3.3
2,433,059	-		Synpcc7942_2367	0.21	-2.7
2,433,066	-		Synpcc7942_2367	0.23	-1.5
2,433,079	+				-0.5
2,433,080	+		Synpcc7942_2367	0.26	+1.9
2,433,117	+				-0.7
2,433,138	+		Synpcc7942_2367	0.37	-2.9
2,433,143	+		Synpcc7942_2367	0.38	-2.1
2,433,151	-		Synpcc7942_2367	0.40	-0.7
2,433,151	-		Synpcc7942_2367	0.40	-0.9
2,433,194	+		Synpcc7942_2367	0.48	-2.6
2,433,194	+		Synpcc7942_2367	0.48	-3.1
2,433,220	+		Synpcc7942_2367	0.53	+0.0
2,433,220	+		Synpcc7942_2367	0.53	-0.8
2,433,228	-		Synpcc7942_2367	0.55	-0.3
2,433,228	-		Synpcc7942_2367	0.55	-1.7
2,433,228	-		Synpcc7942_2367	0.55	+0.1
2,433,245	+		Synpcc7942_2367	0.58	-1.7
2,433,329	+		Synpcc7942_2367	0.75	-2.0
2,433,329	+		Synpcc7942_2367	0.75	-2.4
2,433,337	-		Synpcc7942_2367	0.77	-0.5
2,433,343	-		Synpcc7942_2367	0.78	-0.7
2,433,343	-		Synpcc7942_2367	0.78	-0.8
2,433,355	+		Synpcc7942_2367	0.80	-1.8
2,433,358	-		Synpcc7942_2367	0.81	-2.9
2,433,395	+		Synpcc7942_2367	0.88	-0.2
2,433,443	-				-0.4
2,433,479	-				-1.2
2,433,632	-				+0.2
2,433,651	-				-1.9
2,433,707	+				-1.1
2,433,715	-				-2.4
2,433,717	+				+2.1
2,433,755	+				-0.5
2,433,755	+				+1.2
2,433,755	+				+0.1
2,433,762	-				-0.0
2,433,763	-				-0.6
2,433,763	-				-0.7
2,433,763	-				-2.1
2,433,765	+				+1.1
2,433,765	+				-0.5
2,433,765	+				-2.9
2,433,765	+				+1.0
2,433,765	+				+0.9
2,433,765	+				-1.1
2,433,765	+				+1.1
2,433,765	+				-0.7
2,433,765	+				+0.6
2,433,765	+				+0.2
2,433,765	+				+1.1
2,433,765	+				-0.5
2,433,765	+				+0.7
2,433,765	+				-0.1
2,433,765	+				+0.1
2,433,765	+				-0.9
2,433,765	+				-0.5
2,433,765	+				-3.0
2,433,765	+				+0.1
2,433,765	+				-0.3
2,433,765	+				-2.4
2,433,767	+				+1.9
2,433,767	+				-0.8
2,433,767	+				-1.2
2,433,773	-				-0.4
2,433,773	-				+1.1
2,433,773	-				-0.3
2,433,773	-				+0.2
2,433,773	-				+1.2
2,433,773	-				-1.8
2,433,773	-				+1.5
2,433,773	-				+0.9
2,433,773	-				+1.6
2,433,773	-				+1.9
2,433,773	-				+1.2
2,433,773	-				-0.1
2,433,773	-				-1.1
2,433,773	-				-0.4
2,433,773	-				-0.7
2,433,773	-				-0.1
2,433,773	-				+0.0
2,433,773	-				-0.4
2,433,773	-				-1.7
2,433,773	-				+0.3
2,433,773	-				-2.1
2,433,775	-				-1.4
2,433,797	-				+0.6
2,433,819	+				+0.2
2,433,867	-				-0.2
2,433,869	-				-1.2
2,433,875	+				-0.4
2,433,875	+				+0.9
2,433,880	+				-0.1
2,433,883	-				-1.3
2,433,896	+				-0.8
2,433,898	+				-0.1
2,433,906	-				+0.8
2,433,906	-				-1.4
2,433,928	+				-2.2
2,433,950	+				-0.1
2,433,977	+				-0.3
2,434,003	-		Synpcc7942_2368	0.10	-1.1
2,434,058	-		Synpcc7942_2368	0.15	-1.5
2,434,103	-		Synpcc7942_2368	0.19	-1.2
2,434,151	+		Synpcc7942_2368	0.23	-0.1
2,434,273	-		Synpcc7942_2368	0.34	-2.4
2,434,302	+		Synpcc7942_2368	0.36	-0.1
2,434,326	+		Synpcc7942_2368	0.39	+1.0
2,434,348	+		Synpcc7942_2368	0.40	+0.3
2,434,356	-		Synpcc7942_2368	0.41	-0.1
2,434,367	-		Synpcc7942_2368	0.42	-0.1
2,434,369	+		Synpcc7942_2368	0.42	-0.3
2,434,377	-		Synpcc7942_2368	0.43	+0.2
2,434,377	-		Synpcc7942_2368	0.43	-0.7
2,434,377	-		Synpcc7942_2368	0.43	+0.7
2,434,417	+		Synpcc7942_2368	0.47	+0.5
2,434,425	-		Synpcc7942_2368	0.47	+0.1