Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2186

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,263,082	+		Synpcc7942_2184	0.70	-0.8
2,263,090	-		Synpcc7942_2184	0.71	+0.5
2,263,090	-		Synpcc7942_2184	0.71	+0.1
2,263,109	+		Synpcc7942_2184	0.74	+2.1
2,263,109	+		Synpcc7942_2184	0.74	-0.8
2,263,110	-		Synpcc7942_2184	0.74	+0.3
2,263,110	-		Synpcc7942_2184	0.74	+1.5
2,263,117	-		Synpcc7942_2184	0.75	+0.4
2,263,117	-		Synpcc7942_2184	0.75	-0.7
2,263,123	-		Synpcc7942_2184	0.76	+0.3
2,263,137	+		Synpcc7942_2184	0.77	+0.2
2,263,156	-		Synpcc7942_2184	0.80	+1.0
2,263,169	+		Synpcc7942_2184	0.81	-1.4
2,263,189	-		Synpcc7942_2184	0.84	-1.2
2,263,191	-		Synpcc7942_2184	0.84	+0.9
2,263,222	+		Synpcc7942_2184	0.88	+0.2
2,263,232	+		Synpcc7942_2184	0.89	-0.1
2,263,255	+				-0.1
2,263,268	+				+1.9
2,263,268	+				+0.1
2,263,273	+				-0.5
2,263,294	-				+0.7
2,263,295	-				-0.4
2,263,313	+				-0.1
2,263,319	-				-1.1
2,263,323	+				+0.5
2,263,351	+				-0.1
2,263,351	+				+0.8
2,263,351	+				-1.5
2,263,359	-				+0.7
2,263,359	-				-0.1
2,263,401	-				-0.9
2,263,409	+				-0.3
2,263,410	-				-0.4
2,263,444	-		Synpcc7942_2185	0.10	-3.1
2,263,490	-		Synpcc7942_2185	0.21	-1.1
2,263,517	+		Synpcc7942_2185	0.28	+1.7
2,263,533	-		Synpcc7942_2185	0.32	-0.3
2,263,533	-		Synpcc7942_2185	0.32	+0.3
2,263,660	+		Synpcc7942_2185	0.63	-1.1
2,263,660	+		Synpcc7942_2185	0.63	-0.1
2,263,668	-		Synpcc7942_2185	0.65	+1.2
2,263,742	+		Synpcc7942_2185	0.84	+2.7
2,263,785	+				+1.4
2,263,810	-				+0.9
2,263,861	+				-1.1
2,263,879	-				-1.7
2,263,895	+				+2.3
2,263,914	+				+0.4
2,263,915	-				-0.8
2,263,922	-				+0.9
2,263,924	+				+0.1
2,263,932	-				-1.3
2,263,932	-				-0.7
2,263,932	-				+1.1
2,263,932	-				-1.7
2,263,937	+				-0.1
2,263,937	+				-2.7
2,263,937	+				+0.1
2,263,945	-				+0.2
2,263,945	-				-1.1
2,263,945	-				+1.1
2,263,947	-				-1.7
2,263,962	+				+1.0
2,263,985	+				-0.1
2,263,985	+				-0.3
2,263,993	-				+0.3
2,264,001	+				-2.4
2,264,003	+				-1.4
2,264,028	-				-1.1
2,264,053	+				+0.1
2,264,062	+				-2.1
2,264,067	+				-0.3
2,264,073	+				+0.9
2,264,119	+				+0.2
2,264,143	+				-1.1
2,264,146	-				-0.1
2,264,178	+				+1.3
2,264,192	+				+0.4
2,264,203	+				+0.5
2,264,204	-				+0.8
2,264,209	+				-0.1
2,264,209	+				+1.6
2,264,245	+	nha7	Synpcc7942_2186	0.11	-0.7
2,264,245	+	nha7	Synpcc7942_2186	0.11	-0.3
2,264,245	+	nha7	Synpcc7942_2186	0.11	-1.4
2,264,267	+	nha7	Synpcc7942_2186	0.12	+1.4
2,264,267	+	nha7	Synpcc7942_2186	0.12	-0.3
2,264,267	+	nha7	Synpcc7942_2186	0.12	+1.1
2,264,267	+	nha7	Synpcc7942_2186	0.12	-0.7
2,264,275	-	nha7	Synpcc7942_2186	0.12	-0.7
2,264,275	-	nha7	Synpcc7942_2186	0.12	-0.5
2,264,277	+	nha7	Synpcc7942_2186	0.12	-0.1
2,264,287	-	nha7	Synpcc7942_2186	0.13	-0.1
2,264,299	+	nha7	Synpcc7942_2186	0.14	+0.8
2,264,311	-	nha7	Synpcc7942_2186	0.15	-0.1
2,264,322	-	nha7	Synpcc7942_2186	0.15	+0.2
2,264,325	-	nha7	Synpcc7942_2186	0.15	-0.3
2,264,358	+	nha7	Synpcc7942_2186	0.17	-0.5
2,264,366	-	nha7	Synpcc7942_2186	0.18	+1.5
2,264,381	+	nha7	Synpcc7942_2186	0.19	-0.5
2,264,413	-	nha7	Synpcc7942_2186	0.21	+0.8
2,264,418	+	nha7	Synpcc7942_2186	0.21	-0.4
2,264,428	-	nha7	Synpcc7942_2186	0.22	+0.7
2,264,462	-	nha7	Synpcc7942_2186	0.24	+1.2
2,264,468	-	nha7	Synpcc7942_2186	0.24	+1.3
2,264,471	+	nha7	Synpcc7942_2186	0.24	-0.1
2,264,479	-	nha7	Synpcc7942_2186	0.25	-0.3
2,264,491	+	nha7	Synpcc7942_2186	0.26	+0.2
2,264,499	-	nha7	Synpcc7942_2186	0.26	-1.6
2,264,499	-	nha7	Synpcc7942_2186	0.26	-0.0
2,264,499	-	nha7	Synpcc7942_2186	0.26	-0.1
2,264,508	+	nha7	Synpcc7942_2186	0.27	-0.1
2,264,509	-	nha7	Synpcc7942_2186	0.27	+1.2
2,264,540	-	nha7	Synpcc7942_2186	0.29	-0.7
2,264,591	+	nha7	Synpcc7942_2186	0.32	+0.6
2,264,592	+	nha7	Synpcc7942_2186	0.32	-0.5
2,264,600	-	nha7	Synpcc7942_2186	0.32	-0.9
2,264,605	-	nha7	Synpcc7942_2186	0.32	-1.7
2,264,609	+	nha7	Synpcc7942_2186	0.33	+0.3
2,264,617	-	nha7	Synpcc7942_2186	0.33	+0.5
2,264,619	-	nha7	Synpcc7942_2186	0.33	-1.7
2,264,625	+	nha7	Synpcc7942_2186	0.34	-1.1
2,264,633	-	nha7	Synpcc7942_2186	0.34	-0.8
2,264,633	-	nha7	Synpcc7942_2186	0.34	+0.8
2,264,639	-	nha7	Synpcc7942_2186	0.35	-1.7
2,264,673	+	nha7	Synpcc7942_2186	0.37	-1.1
2,264,694	+	nha7	Synpcc7942_2186	0.38	+1.0
2,264,694	+	nha7	Synpcc7942_2186	0.38	-0.1
2,264,694	+	nha7	Synpcc7942_2186	0.38	-1.1
2,264,704	+	nha7	Synpcc7942_2186	0.39	-0.5
2,264,718	+	nha7	Synpcc7942_2186	0.39	-0.1
2,264,747	-	nha7	Synpcc7942_2186	0.41	+0.4
2,264,752	+	nha7	Synpcc7942_2186	0.41	+0.5
2,264,752	+	nha7	Synpcc7942_2186	0.41	+0.7
2,264,760	-	nha7	Synpcc7942_2186	0.42	+0.9
2,264,785	-	nha7	Synpcc7942_2186	0.43	+0.4
2,264,785	-	nha7	Synpcc7942_2186	0.43	-0.3
2,264,800	+	nha7	Synpcc7942_2186	0.44	+1.9
2,264,800	+	nha7	Synpcc7942_2186	0.44	+0.5
2,264,800	+	nha7	Synpcc7942_2186	0.44	-1.2
2,264,808	-	nha7	Synpcc7942_2186	0.45	+1.7
2,264,808	-	nha7	Synpcc7942_2186	0.45	-0.4
2,264,808	-	nha7	Synpcc7942_2186	0.45	-1.5
2,264,812	+	nha7	Synpcc7942_2186	0.45	-0.1
2,264,850	-				+1.5
2,264,856	+	nha7	Synpcc7942_2186	0.48	-0.1
2,264,861	+	nha7	Synpcc7942_2186	0.48	-0.1
2,264,864	-	nha7	Synpcc7942_2186	0.48	+0.6
2,264,910	-	nha7	Synpcc7942_2186	0.51	-0.3
2,264,947	+	nha7	Synpcc7942_2186	0.53	+1.0
2,264,955	+	nha7	Synpcc7942_2186	0.54	-0.1
2,264,955	+	nha7	Synpcc7942_2186	0.54	+0.5
2,264,963	-	nha7	Synpcc7942_2186	0.54	-0.1
2,264,968	-	nha7	Synpcc7942_2186	0.55	+0.3
2,264,970	+	nha7	Synpcc7942_2186	0.55	+1.9
2,264,970	+	nha7	Synpcc7942_2186	0.55	+1.8
2,264,970	+	nha7	Synpcc7942_2186	0.55	-0.1
2,264,971	+	nha7	Synpcc7942_2186	0.55	-0.1
2,264,975	+	nha7	Synpcc7942_2186	0.55	+0.1
2,264,975	+	nha7	Synpcc7942_2186	0.55	+0.5
2,265,004	+	nha7	Synpcc7942_2186	0.57	-2.1
2,265,067	+	nha7	Synpcc7942_2186	0.61	+0.1
2,265,068	-				-0.1
2,265,140	-	nha7	Synpcc7942_2186	0.65	-0.1
2,265,143	+	nha7	Synpcc7942_2186	0.65	+2.1
2,265,149	+	nha7	Synpcc7942_2186	0.66	-0.2
2,265,157	+	nha7	Synpcc7942_2186	0.66	-0.7
2,265,165	-	nha7	Synpcc7942_2186	0.67	+0.5
2,265,186	+				+1.7
2,265,194	-	nha7	Synpcc7942_2186	0.68	+0.3
2,265,201	-	nha7	Synpcc7942_2186	0.69	+1.1
2,265,205	+	nha7	Synpcc7942_2186	0.69	+0.6
2,265,213	-	nha7	Synpcc7942_2186	0.70	-0.8
2,265,236	+	nha7	Synpcc7942_2186	0.71	+1.9
2,265,244	-	nha7	Synpcc7942_2186	0.71	-1.0
2,265,244	-				-1.1
2,265,270	+	nha7	Synpcc7942_2186	0.73	+1.7
2,265,270	+	nha7	Synpcc7942_2186	0.73	+0.4
2,265,278	-	nha7	Synpcc7942_2186	0.74	-0.5
2,265,278	-	nha7	Synpcc7942_2186	0.74	-0.6
2,265,280	+				+1.5
2,265,283	-	nha7	Synpcc7942_2186	0.74	+0.5
2,265,295	+	nha7	Synpcc7942_2186	0.75	+1.7
2,265,318	+	nha7	Synpcc7942_2186	0.76	-0.1
2,265,326	-	nha7	Synpcc7942_2186	0.76	-0.4
2,265,347	-	nha7	Synpcc7942_2186	0.78	+1.1
2,265,350	-	nha7	Synpcc7942_2186	0.78	+0.4
2,265,350	-	nha7	Synpcc7942_2186	0.78	-3.1
2,265,354	+	nha7	Synpcc7942_2186	0.78	+2.1
2,265,355	-	nha7	Synpcc7942_2186	0.78	+1.9
2,265,414	-	nha7	Synpcc7942_2186	0.82	+1.3
2,265,430	-	nha7	Synpcc7942_2186	0.83	+2.2
2,265,456	-	nha7	Synpcc7942_2186	0.84	+0.7
2,265,563	-				-0.1
2,265,563	-				+0.9
2,265,563	-				+1.2
2,265,608	-				-1.1
2,265,647	+				+0.9
2,265,703	-				+1.2
2,265,715	+				+0.4
2,265,718	-				+0.7
2,265,749	-		Synpcc7942_2187	0.13	+1.7
2,265,749	-		Synpcc7942_2187	0.13	+0.3
2,265,759	-		Synpcc7942_2187	0.15	+1.7
2,265,773	-		Synpcc7942_2187	0.19	-0.1
2,265,773	-		Synpcc7942_2187	0.19	+2.7
2,265,773	-		Synpcc7942_2187	0.19	-0.8
2,265,775	+		Synpcc7942_2187	0.19	+1.2
2,265,783	-		Synpcc7942_2187	0.21	+3.1
2,265,785	+		Synpcc7942_2187	0.21	-1.7
2,265,785	+		Synpcc7942_2187	0.21	+0.1
2,265,785	+		Synpcc7942_2187	0.21	+0.1
2,265,789	-		Synpcc7942_2187	0.22	+1.1
2,265,793	-		Synpcc7942_2187	0.23	+0.7
2,265,793	-		Synpcc7942_2187	0.23	+1.5
2,265,793	-		Synpcc7942_2187	0.23	-0.8
2,265,803	-		Synpcc7942_2187	0.26	+1.7
2,265,807	+		Synpcc7942_2187	0.27	+1.7
2,265,820	-		Synpcc7942_2187	0.30	+0.6
2,265,822	+		Synpcc7942_2187	0.31	+0.6
2,265,822	+		Synpcc7942_2187	0.31	-1.4
2,265,829	+		Synpcc7942_2187	0.32	+2.2
2,265,860	+		Synpcc7942_2187	0.40	-0.1
2,265,866	+		Synpcc7942_2187	0.41	-1.1
2,265,928	+		Synpcc7942_2187	0.57	+0.9
2,265,979	-		Synpcc7942_2187	0.69	+0.1
2,265,979	-		Synpcc7942_2187	0.69	-0.7
2,265,979	-		Synpcc7942_2187	0.69	+0.5
2,266,007	+		Synpcc7942_2187	0.76	-1.1
2,266,015	-		Synpcc7942_2187	0.78	-0.4
2,266,015	-		Synpcc7942_2187	0.78	-0.8
2,266,030	-		Synpcc7942_2187	0.82	-0.1
2,266,039	+		Synpcc7942_2187	0.84	-1.8
2,266,062	-				+0.7
2,266,064	+				-1.7
2,266,072	-				+0.8
2,266,080	+				-0.4
2,266,082	-				+2.0
2,266,088	-				+1.7
2,266,088	-				-0.7
2,266,098	+				-0.5
2,266,098	+				+1.3
2,266,098	+				-0.1
2,266,098	+				+0.7
2,266,098	+				+1.5
2,266,098	+				-0.1
2,266,105	-				+0.1
2,266,106	-				+0.8
2,266,113	+				+0.8
2,266,116	-				-0.3
2,266,118	+				+0.5
2,266,126	-				+1.1