Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2184

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,261,519	+				+0.9
2,261,527	-				-0.1
2,261,527	-				+0.9
2,261,537	-				-1.5
2,261,553	+				+0.9
2,261,555	+				+1.2
2,261,561	-				-0.8
2,261,593	+				-0.1
2,261,612	+				-0.1
2,261,615	+				+0.1
2,261,667	-	rnhA	Synpcc7942_2183	0.14	-2.1
2,261,674	+	rnhA	Synpcc7942_2183	0.15	+1.9
2,261,675	+	rnhA	Synpcc7942_2183	0.15	-1.1
2,261,681	+	rnhA	Synpcc7942_2183	0.16	-2.4
2,261,698	-	rnhA	Synpcc7942_2183	0.18	+0.8
2,261,698	-	rnhA	Synpcc7942_2183	0.18	-0.3
2,261,756	-	rnhA	Synpcc7942_2183	0.26	-1.2
2,261,773	-	rnhA	Synpcc7942_2183	0.28	-0.6
2,261,785	+	rnhA	Synpcc7942_2183	0.29	-0.1
2,261,786	+	rnhA	Synpcc7942_2183	0.29	-0.1
2,261,791	+	rnhA	Synpcc7942_2183	0.30	-2.5
2,261,798	+	rnhA	Synpcc7942_2183	0.31	-1.0
2,261,801	-	rnhA	Synpcc7942_2183	0.31	+0.9
2,261,801	-	rnhA	Synpcc7942_2183	0.31	-1.3
2,261,810	+	rnhA	Synpcc7942_2183	0.33	-0.4
2,261,846	+	rnhA	Synpcc7942_2183	0.37	-0.7
2,261,908	-	rnhA	Synpcc7942_2183	0.45	+1.5
2,261,970	+	rnhA	Synpcc7942_2183	0.53	-0.8
2,261,970	+	rnhA	Synpcc7942_2183	0.53	+0.5
2,261,978	-	rnhA	Synpcc7942_2183	0.54	+1.0
2,261,983	+	rnhA	Synpcc7942_2183	0.55	-0.1
2,261,996	+	rnhA	Synpcc7942_2183	0.56	+0.4
2,262,024	+	rnhA	Synpcc7942_2183	0.60	-1.7
2,262,031	+	rnhA	Synpcc7942_2183	0.61	-0.9
2,262,031	+	rnhA	Synpcc7942_2183	0.61	-1.1
2,262,063	-	rnhA	Synpcc7942_2183	0.65	+1.1
2,262,071	+	rnhA	Synpcc7942_2183	0.66	-0.5
2,262,071	-	rnhA	Synpcc7942_2183	0.66	-1.1
2,262,077	+	rnhA	Synpcc7942_2183	0.67	+0.9
2,262,077	+	rnhA	Synpcc7942_2183	0.67	-0.1
2,262,085	-	rnhA	Synpcc7942_2183	0.68	+0.3
2,262,085	-	rnhA	Synpcc7942_2183	0.68	+0.7
2,262,088	-	rnhA	Synpcc7942_2183	0.68	-0.9
2,262,091	+	rnhA	Synpcc7942_2183	0.69	-0.1
2,262,115	+	rnhA	Synpcc7942_2183	0.72	-0.5
2,262,123	-	rnhA	Synpcc7942_2183	0.73	-0.4
2,262,123	-	rnhA	Synpcc7942_2183	0.73	-0.8
2,262,125	-	rnhA	Synpcc7942_2183	0.73	-0.6
2,262,140	-	rnhA	Synpcc7942_2183	0.75	+1.1
2,262,159	+	rnhA	Synpcc7942_2183	0.77	-0.8
2,262,195	+	rnhA	Synpcc7942_2183	0.82	+0.9
2,262,211	+	rnhA	Synpcc7942_2183	0.84	+1.5
2,262,225	-	rnhA	Synpcc7942_2183	0.86	+0.5
2,262,263	+				-0.4
2,262,263	+				+1.4
2,262,278	+				+0.6
2,262,278	+				-0.7
2,262,278	+				+0.9
2,262,278	+				-0.3
2,262,278	+				+0.2
2,262,278	+				-1.7
2,262,278	+				-0.1
2,262,278	+				+2.7
2,262,278	+				+1.1
2,262,278	+				-1.4
2,262,278	+				+0.7
2,262,283	+				-0.7
2,262,286	-				-1.3
2,262,286	-				+0.4
2,262,286	-				-0.8
2,262,286	-				+1.9
2,262,286	-				+1.4
2,262,307	+				-1.4
2,262,307	+				-0.1
2,262,334	-				+0.3
2,262,353	-				-0.5
2,262,477	+				-0.1
2,262,493	+				-0.1
2,262,500	+				-0.8
2,262,500	+				+1.7
2,262,500	+				+0.2
2,262,508	-				-0.7
2,262,535	-				+1.3
2,262,535	-				+1.9
2,262,538	-				+2.2
2,262,552	+				+2.7
2,262,570	-				+0.3
2,262,600	+		Synpcc7942_2184	0.10	+0.5
2,262,620	+		Synpcc7942_2184	0.13	+0.9
2,262,620	+		Synpcc7942_2184	0.13	+0.9
2,262,628	-		Synpcc7942_2184	0.14	+1.2
2,262,638	-		Synpcc7942_2184	0.15	-0.9
2,262,641	-		Synpcc7942_2184	0.15	-1.4
2,262,656	+		Synpcc7942_2184	0.17	+0.7
2,262,669	+		Synpcc7942_2184	0.19	+0.4
2,262,699	+		Synpcc7942_2184	0.23	-0.5
2,262,727	+		Synpcc7942_2184	0.26	-1.6
2,262,727	+		Synpcc7942_2184	0.26	+1.5
2,262,766	+		Synpcc7942_2184	0.31	-1.3
2,262,766	+		Synpcc7942_2184	0.31	-0.1
2,262,789	-		Synpcc7942_2184	0.34	-0.3
2,262,793	+		Synpcc7942_2184	0.34	-0.9
2,262,801	-		Synpcc7942_2184	0.35	+0.9
2,262,802	-		Synpcc7942_2184	0.35	-0.1
2,262,852	+		Synpcc7942_2184	0.42	-0.6
2,262,852	+		Synpcc7942_2184	0.42	+0.9
2,262,852	+		Synpcc7942_2184	0.42	+0.9
2,262,866	+		Synpcc7942_2184	0.43	-1.2
2,262,870	-		Synpcc7942_2184	0.44	+0.5
2,262,878	+		Synpcc7942_2184	0.45	-0.6
2,262,878	+		Synpcc7942_2184	0.45	-1.1
2,262,920	+		Synpcc7942_2184	0.50	+0.5
2,262,920	+		Synpcc7942_2184	0.50	-0.1
2,262,928	-		Synpcc7942_2184	0.51	-0.2
2,262,933	-		Synpcc7942_2184	0.52	+0.3
2,262,933	-		Synpcc7942_2184	0.52	+0.2
2,262,950	+		Synpcc7942_2184	0.54	-0.1
2,262,953	-		Synpcc7942_2184	0.54	-0.2
2,262,965	-		Synpcc7942_2184	0.56	-0.3
2,262,970	+		Synpcc7942_2184	0.56	-0.1
2,262,980	+		Synpcc7942_2184	0.58	+1.5
2,262,983	-		Synpcc7942_2184	0.58	+1.6
2,263,048	-		Synpcc7942_2184	0.66	+2.2
2,263,059	+				+1.9
2,263,061	+		Synpcc7942_2184	0.68	+0.0
2,263,069	-		Synpcc7942_2184	0.69	-0.7
2,263,082	+		Synpcc7942_2184	0.70	-0.8
2,263,090	-		Synpcc7942_2184	0.71	+0.5
2,263,090	-		Synpcc7942_2184	0.71	+0.1
2,263,109	+		Synpcc7942_2184	0.74	+2.1
2,263,109	+		Synpcc7942_2184	0.74	-0.8
2,263,110	-		Synpcc7942_2184	0.74	+0.3
2,263,110	-		Synpcc7942_2184	0.74	+1.5
2,263,117	-		Synpcc7942_2184	0.75	+0.4
2,263,117	-		Synpcc7942_2184	0.75	-0.7
2,263,123	-		Synpcc7942_2184	0.76	+0.3
2,263,137	+		Synpcc7942_2184	0.77	+0.2
2,263,156	-		Synpcc7942_2184	0.80	+1.0
2,263,169	+		Synpcc7942_2184	0.81	-1.4
2,263,189	-		Synpcc7942_2184	0.84	-1.2
2,263,191	-		Synpcc7942_2184	0.84	+0.9
2,263,222	+		Synpcc7942_2184	0.88	+0.2
2,263,232	+		Synpcc7942_2184	0.89	-0.1
2,263,255	+				-0.1
2,263,268	+				+1.9
2,263,268	+				+0.1
2,263,273	+				-0.5
2,263,294	-				+0.7
2,263,295	-				-0.4
2,263,313	+				-0.1
2,263,319	-				-1.1
2,263,323	+				+0.5
2,263,351	+				-0.1
2,263,351	+				+0.8
2,263,351	+				-1.5
2,263,359	-				+0.7
2,263,359	-				-0.1
2,263,401	-				-0.9
2,263,409	+				-0.3
2,263,410	-				-0.4
2,263,444	-		Synpcc7942_2185	0.10	-3.1
2,263,490	-		Synpcc7942_2185	0.21	-1.1
2,263,517	+		Synpcc7942_2185	0.28	+1.7
2,263,533	-		Synpcc7942_2185	0.32	-0.3
2,263,533	-		Synpcc7942_2185	0.32	+0.3
2,263,660	+		Synpcc7942_2185	0.63	-1.1
2,263,660	+		Synpcc7942_2185	0.63	-0.1
2,263,668	-		Synpcc7942_2185	0.65	+1.2
2,263,742	+		Synpcc7942_2185	0.84	+2.7
2,263,785	+				+1.4
2,263,810	-				+0.9
2,263,861	+				-1.1
2,263,879	-				-1.7
2,263,895	+				+2.3
2,263,914	+				+0.4
2,263,915	-				-0.8
2,263,922	-				+0.9
2,263,924	+				+0.1
2,263,932	-				-1.3
2,263,932	-				-0.7
2,263,932	-				+1.1
2,263,932	-				-1.7
2,263,937	+				-0.1
2,263,937	+				-2.7
2,263,937	+				+0.1
2,263,945	-				+0.2
2,263,945	-				-1.1
2,263,945	-				+1.1
2,263,947	-				-1.7
2,263,962	+				+1.0
2,263,985	+				-0.1
2,263,985	+				-0.3
2,263,993	-				+0.3
2,264,001	+				-2.4
2,264,003	+				-1.4
2,264,028	-				-1.1
2,264,053	+				+0.1
2,264,062	+				-2.1
2,264,067	+				-0.3
2,264,073	+				+0.9
2,264,119	+				+0.2
2,264,143	+				-1.1
2,264,146	-				-0.1
2,264,178	+				+1.3
2,264,192	+				+0.4
2,264,203	+				+0.5
2,264,204	-				+0.8
2,264,209	+				-0.1
2,264,209	+				+1.6
2,264,245	+	nha7	Synpcc7942_2186	0.11	-0.7
2,264,245	+	nha7	Synpcc7942_2186	0.11	-0.3
2,264,245	+	nha7	Synpcc7942_2186	0.11	-1.4
2,264,267	+	nha7	Synpcc7942_2186	0.12	+1.4
2,264,267	+	nha7	Synpcc7942_2186	0.12	-0.3
2,264,267	+	nha7	Synpcc7942_2186	0.12	+1.1
2,264,267	+	nha7	Synpcc7942_2186	0.12	-0.7
2,264,275	-	nha7	Synpcc7942_2186	0.12	-0.7
2,264,275	-	nha7	Synpcc7942_2186	0.12	-0.5
2,264,277	+	nha7	Synpcc7942_2186	0.12	-0.1
2,264,287	-	nha7	Synpcc7942_2186	0.13	-0.1
2,264,299	+	nha7	Synpcc7942_2186	0.14	+0.8
2,264,311	-	nha7	Synpcc7942_2186	0.15	-0.1