Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2002

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,070,383	-				-0.2
2,070,390	+				-1.1
2,070,417	+				+0.8
2,070,530	+	minC	Synpcc7942_2001	0.22	-0.9
2,070,538	-	minC	Synpcc7942_2001	0.23	-0.3
2,070,550	+	minC	Synpcc7942_2001	0.25	-1.2
2,070,552	-	minC	Synpcc7942_2001	0.25	-1.0
2,070,562	-	minC	Synpcc7942_2001	0.26	-1.1
2,070,583	-	minC	Synpcc7942_2001	0.29	-0.9
2,070,611	+	minC	Synpcc7942_2001	0.32	+0.7
2,070,666	-	minC	Synpcc7942_2001	0.39	+0.6
2,070,672	-	minC	Synpcc7942_2001	0.40	-1.9
2,070,672	-	minC	Synpcc7942_2001	0.40	-0.1
2,070,679	+	minC	Synpcc7942_2001	0.40	+2.3
2,070,687	-	minC	Synpcc7942_2001	0.41	-0.7
2,070,716	-	minC	Synpcc7942_2001	0.45	+0.9
2,070,734	+	minC	Synpcc7942_2001	0.47	-0.5
2,070,754	-	minC	Synpcc7942_2001	0.50	-0.1
2,070,785	+	minC	Synpcc7942_2001	0.53	-0.1
2,070,793	-	minC	Synpcc7942_2001	0.54	-0.9
2,070,795	-	minC	Synpcc7942_2001	0.55	+1.8
2,070,795	-	minC	Synpcc7942_2001	0.55	+0.8
2,070,795	-	minC	Synpcc7942_2001	0.55	+0.1
2,070,830	+	minC	Synpcc7942_2001	0.59	-1.7
2,070,833	-	minC	Synpcc7942_2001	0.59	-1.1
2,070,901	+	minC	Synpcc7942_2001	0.68	+1.1
2,070,901	+	minC	Synpcc7942_2001	0.68	-2.1
2,070,961	+	minC	Synpcc7942_2001	0.75	-1.1
2,071,054	-	minC	Synpcc7942_2001	0.86	-0.5
2,071,088	-				-1.1
2,071,135	+				-0.4
2,071,142	+				-1.4
2,071,142	+				+0.3
2,071,142	+				-1.9
2,071,150	-				-0.9
2,071,152	-				+1.9
2,071,172	-				-0.9
2,071,179	+				+0.2
2,071,187	-				+0.9
2,071,192	-				+1.2
2,071,236	+				-0.7
2,071,239	-				+0.9
2,071,262	-				-1.0
2,071,263	+				+0.7
2,071,280	-				-1.7
2,071,316	+				-0.1
2,071,316	+				+0.5
2,071,317	-				+1.0
2,071,321	+				+0.6
2,071,321	+				+2.3
2,071,321	+				-0.8
2,071,321	+				-0.5
2,071,321	+				-0.4
2,071,324	-				-0.3
2,071,324	-				+0.9
2,071,324	-				+0.8
2,071,324	-				+0.4
2,071,324	-				+1.5
2,071,324	-				+0.2
2,071,348	+				-0.3
2,071,355	-				-0.1
2,071,371	+				-0.7
2,071,373	+				+1.3
2,071,373	+				+0.3
2,071,373	+				-0.9
2,071,381	-				-0.4
2,071,400	+				+0.1
2,071,407	-		Synpcc7942_2002	0.10	+1.1
2,071,416	+				-0.1
2,071,440	+		Synpcc7942_2002	0.15	+0.3
2,071,450	+		Synpcc7942_2002	0.16	-2.2
2,071,450	+		Synpcc7942_2002	0.16	-0.2
2,071,455	+		Synpcc7942_2002	0.17	-0.9
2,071,458	+		Synpcc7942_2002	0.17	-0.2
2,071,477	+		Synpcc7942_2002	0.20	-1.4
2,071,483	+		Synpcc7942_2002	0.21	-2.4
2,071,503	+		Synpcc7942_2002	0.24	+2.3
2,071,538	+		Synpcc7942_2002	0.29	+0.4
2,071,578	-		Synpcc7942_2002	0.34	-0.1
2,071,579	-				+1.9
2,071,581	+		Synpcc7942_2002	0.35	+0.5
2,071,584	-		Synpcc7942_2002	0.35	-0.9
2,071,584	-		Synpcc7942_2002	0.35	+0.7
2,071,584	-		Synpcc7942_2002	0.35	+0.8
2,071,604	-		Synpcc7942_2002	0.38	-2.9
2,071,604	-		Synpcc7942_2002	0.38	-0.1
2,071,618	+		Synpcc7942_2002	0.40	+0.6
2,071,623	-		Synpcc7942_2002	0.41	+1.9
2,071,636	+		Synpcc7942_2002	0.42	-0.3
2,071,637	-		Synpcc7942_2002	0.42	-0.1
2,071,648	-		Synpcc7942_2002	0.44	-0.1
2,071,663	-		Synpcc7942_2002	0.46	+0.5
2,071,681	+		Synpcc7942_2002	0.49	-0.4
2,071,682	+		Synpcc7942_2002	0.49	-2.7
2,071,719	+		Synpcc7942_2002	0.54	-0.5
2,071,736	+		Synpcc7942_2002	0.56	+0.9
2,071,785	+		Synpcc7942_2002	0.63	+0.7
2,071,795	+		Synpcc7942_2002	0.65	-0.2
2,071,805	+		Synpcc7942_2002	0.66	-0.1
2,071,805	+		Synpcc7942_2002	0.66	-1.2
2,071,805	+		Synpcc7942_2002	0.66	-0.2
2,071,805	+		Synpcc7942_2002	0.66	+0.1
2,071,805	+		Synpcc7942_2002	0.66	+0.3
2,071,805	+		Synpcc7942_2002	0.66	+0.5
2,071,806	+		Synpcc7942_2002	0.66	+0.9
2,071,808	-		Synpcc7942_2002	0.67	-1.1
2,071,813	-		Synpcc7942_2002	0.67	-1.9
2,071,813	-		Synpcc7942_2002	0.67	-1.7
2,071,815	+		Synpcc7942_2002	0.68	-0.1
2,071,828	+		Synpcc7942_2002	0.69	-0.8
2,071,828	-		Synpcc7942_2002	0.69	-0.2
2,071,893	+		Synpcc7942_2002	0.78	+0.5
2,071,896	+		Synpcc7942_2002	0.79	-0.9
2,071,914	-		Synpcc7942_2002	0.81	-1.4
2,071,927	+		Synpcc7942_2002	0.83	-0.1
2,071,952	+		Synpcc7942_2002	0.87	+0.4
2,071,999	-				-1.3
2,071,999	-				-0.3
2,071,999	-				-1.3
2,072,016	+				-2.4
2,072,024	-				-0.5
2,072,089	+				-1.1
2,072,091	+				+0.9
2,072,095	-				-2.1
2,072,097	-				-0.9
2,072,097	-				+0.4
2,072,099	-				-0.4
2,072,108	+				-0.4
2,072,109	-				+0.8
2,072,109	-				+0.1
2,072,109	-				+0.4
2,072,109	-				+1.3
2,072,109	-				+2.5
2,072,109	-				-0.3
2,072,109	-				+1.1
2,072,109	-				-2.6
2,072,109	-				-1.1
2,072,118	-				+0.4
2,072,118	-				+0.5
2,072,123	+				+1.0
2,072,141	-				+0.2
2,072,157	+				+0.4
2,072,157	+				+0.2
2,072,157	+				-0.4
2,072,157	+				-1.1
2,072,157	+				-0.4
2,072,157	+				+0.5
2,072,157	+				-0.6
2,072,165	-		Synpcc7942_2003	0.10	-0.5
2,072,165	-		Synpcc7942_2003	0.10	+0.5
2,072,165	-		Synpcc7942_2003	0.10	+0.5
2,072,204	-		Synpcc7942_2003	0.16	-0.6
2,072,224	-		Synpcc7942_2003	0.18	-0.5
2,072,241	-		Synpcc7942_2003	0.21	-1.1
2,072,252	+		Synpcc7942_2003	0.22	-0.9
2,072,255	-		Synpcc7942_2003	0.23	+0.5
2,072,271	-		Synpcc7942_2003	0.25	+1.6
2,072,275	+		Synpcc7942_2003	0.25	+1.0
2,072,275	+		Synpcc7942_2003	0.25	-0.3
2,072,280	+		Synpcc7942_2003	0.26	+0.4
2,072,283	-				+0.9
2,072,324	+		Synpcc7942_2003	0.32	+1.5
2,072,326	+		Synpcc7942_2003	0.33	-0.8
2,072,332	-		Synpcc7942_2003	0.33	+1.4
2,072,332	-		Synpcc7942_2003	0.33	-0.6
2,072,332	-		Synpcc7942_2003	0.33	+0.1
2,072,336	+		Synpcc7942_2003	0.34	+0.6
2,072,336	+		Synpcc7942_2003	0.34	+0.6
2,072,336	+		Synpcc7942_2003	0.34	+0.3
2,072,336	+		Synpcc7942_2003	0.34	+1.5
2,072,341	+		Synpcc7942_2003	0.35	+1.4
2,072,343	+		Synpcc7942_2003	0.35	+0.3
2,072,344	-		Synpcc7942_2003	0.35	-0.5
2,072,344	-		Synpcc7942_2003	0.35	+0.4
2,072,371	+		Synpcc7942_2003	0.39	+0.7
2,072,374	-		Synpcc7942_2003	0.39	-0.7
2,072,374	-		Synpcc7942_2003	0.39	-0.6
2,072,379	-		Synpcc7942_2003	0.40	+1.0
2,072,403	+				-0.1
2,072,417	-		Synpcc7942_2003	0.45	-0.5
2,072,417	-		Synpcc7942_2003	0.45	+1.1
2,072,436	-		Synpcc7942_2003	0.48	+3.3
2,072,464	+				+0.4
2,072,467	-		Synpcc7942_2003	0.52	-0.1
2,072,502	+		Synpcc7942_2003	0.57	-0.1
2,072,561	-		Synpcc7942_2003	0.66	+0.7
2,072,577	-		Synpcc7942_2003	0.68	+0.9
2,072,588	-		Synpcc7942_2003	0.69	-0.8
2,072,597	+		Synpcc7942_2003	0.71	-0.1
2,072,610	-		Synpcc7942_2003	0.72	-0.1
2,072,648	+		Synpcc7942_2003	0.78	-0.1
2,072,648	+		Synpcc7942_2003	0.78	+3.3
2,072,648	+		Synpcc7942_2003	0.78	+0.6
2,072,648	+		Synpcc7942_2003	0.78	+0.8
2,072,648	+		Synpcc7942_2003	0.78	-0.9
2,072,648	+		Synpcc7942_2003	0.78	+1.1
2,072,649	+		Synpcc7942_2003	0.78	-0.2
2,072,649	+		Synpcc7942_2003	0.78	-1.3
2,072,649	+		Synpcc7942_2003	0.78	-1.9
2,072,656	-		Synpcc7942_2003	0.79	-0.7
2,072,656	-		Synpcc7942_2003	0.79	+0.6
2,072,657	-		Synpcc7942_2003	0.79	+0.7
2,072,657	-		Synpcc7942_2003	0.79	+1.8
2,072,657	-		Synpcc7942_2003	0.79	+0.4
2,072,657	-		Synpcc7942_2003	0.79	-0.5
2,072,657	-		Synpcc7942_2003	0.79	+0.6
2,072,657	-		Synpcc7942_2003	0.79	+2.1
2,072,657	-		Synpcc7942_2003	0.79	-0.1
2,072,657	-		Synpcc7942_2003	0.79	+1.5
2,072,657	-		Synpcc7942_2003	0.79	+1.3
2,072,657	-		Synpcc7942_2003	0.79	-0.3
2,072,666	-		Synpcc7942_2003	0.80	-1.6
2,072,730	+		Synpcc7942_2003	0.89	+1.2
2,072,732	-		Synpcc7942_2003	0.89	+1.2
2,072,764	-				+0.4
2,072,764	-				+1.4
2,072,777	+				-0.7
2,072,785	-				-0.6
2,072,797	-				+0.9
2,072,844	-				-0.5
2,072,916	-				+0.6
2,072,939	-				+0.0
2,072,975	-				-1.5
2,072,991	+				+0.2
2,073,025	+				+0.4
2,073,025	+				+0.5
2,073,025	+				+0.3
2,073,025	+				+0.4
2,073,033	-				+1.0
2,073,033	-				-1.4