Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2055

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
2,343,577	+				-1.2
2,343,577	+				-1.6
2,343,577	+				-0.3
2,343,577	+				-0.3
2,343,577	+				-0.2
2,343,578	-				-1.2
2,343,578	-				-0.3
2,343,578	-				+0.2
2,343,707	+				-0.3
2,343,707	+				-0.4
2,343,707	+				+0.6
2,343,708	-				+0.4
2,343,708	-				-0.6
2,343,708	-				+3.4
2,344,111	+		Pf1N1B4_2054	0.20	+0.2
2,344,111	+		Pf1N1B4_2054	0.20	-0.6
2,344,112	-		Pf1N1B4_2054	0.20	+1.4
2,344,112	-		Pf1N1B4_2054	0.20	-1.6
2,344,112	-		Pf1N1B4_2054	0.20	+1.8
2,344,453	+				+1.4
2,344,453	+				+0.4
2,344,454	-				-0.7
2,344,624	+				+0.2
2,344,624	+				-1.6
2,344,624	+				+0.4
2,344,625	-				-0.2
2,344,625	-				+2.2
2,344,729	+		Pf1N1B4_2055	0.13	-0.6
2,344,729	+		Pf1N1B4_2055	0.13	-0.3
2,344,729	+		Pf1N1B4_2055	0.13	-1.6
2,344,729	+				+0.4
2,344,729	+		Pf1N1B4_2055	0.13	+0.2
2,344,729	+		Pf1N1B4_2055	0.13	+0.8
2,344,729	+		Pf1N1B4_2055	0.13	-0.6
2,344,729	+		Pf1N1B4_2055	0.13	+1.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.0
2,344,729	+		Pf1N1B4_2055	0.13	-0.6
2,344,729	+		Pf1N1B4_2055	0.13	+1.4
2,344,729	+		Pf1N1B4_2055	0.13	-0.3
2,344,729	+		Pf1N1B4_2055	0.13	-0.3
2,344,729	+		Pf1N1B4_2055	0.13	+0.4
2,344,730	-		Pf1N1B4_2055	0.13	+0.4
2,344,730	-		Pf1N1B4_2055	0.13	-0.2
2,344,730	-		Pf1N1B4_2055	0.13	-0.6
2,344,730	-		Pf1N1B4_2055	0.13	-0.3
2,344,730	-				-0.2
2,344,730	-		Pf1N1B4_2055	0.13	-0.6
2,344,918	+		Pf1N1B4_2055	0.23	+0.1
2,344,918	+		Pf1N1B4_2055	0.23	-0.6
2,344,918	+		Pf1N1B4_2055	0.23	+0.1
2,344,918	+		Pf1N1B4_2055	0.23	+1.0
2,344,918	+		Pf1N1B4_2055	0.23	-0.1
2,344,918	+		Pf1N1B4_2055	0.23	+0.4
2,344,918	+		Pf1N1B4_2055	0.23	-0.0
2,344,918	+		Pf1N1B4_2055	0.23	-0.9
2,344,918	+		Pf1N1B4_2055	0.23	+0.9
2,344,918	+		Pf1N1B4_2055	0.23	+1.7
2,344,919	-		Pf1N1B4_2055	0.23	+0.4
2,344,919	-		Pf1N1B4_2055	0.23	-0.2
2,345,060	-		Pf1N1B4_2055	0.30	+0.4
2,345,230	+		Pf1N1B4_2055	0.39	+0.7
2,345,230	+		Pf1N1B4_2055	0.39	-0.3
2,345,230	+		Pf1N1B4_2055	0.39	+1.4
2,345,321	+		Pf1N1B4_2055	0.43	-0.6
2,345,351	-		Pf1N1B4_2055	0.45	+0.4
2,345,440	+		Pf1N1B4_2055	0.50	-0.3
2,345,440	+		Pf1N1B4_2055	0.50	+1.1
2,345,440	+		Pf1N1B4_2055	0.50	+2.7
2,345,441	-		Pf1N1B4_2055	0.50	+0.7
2,345,441	-		Pf1N1B4_2055	0.50	-0.0
2,345,441	-		Pf1N1B4_2055	0.50	+0.6
2,345,441	-		Pf1N1B4_2055	0.50	+0.6
2,345,441	-		Pf1N1B4_2055	0.50	-0.2
2,345,443	+		Pf1N1B4_2055	0.50	+0.8
2,345,596	+		Pf1N1B4_2055	0.58	+1.4
2,345,623	+		Pf1N1B4_2055	0.59	+0.9
2,345,623	+		Pf1N1B4_2055	0.59	+0.4
2,345,623	+		Pf1N1B4_2055	0.59	+0.0
2,345,623	+		Pf1N1B4_2055	0.59	+0.8
2,345,623	+		Pf1N1B4_2055	0.59	+1.4
2,345,623	+		Pf1N1B4_2055	0.59	-1.2
2,345,624	-		Pf1N1B4_2055	0.59	-0.3
2,345,624	-		Pf1N1B4_2055	0.59	+0.4
2,345,624	-		Pf1N1B4_2055	0.59	+0.6
2,345,624	-		Pf1N1B4_2055	0.59	+0.7
2,345,624	-		Pf1N1B4_2055	0.59	+0.1
2,345,624	-		Pf1N1B4_2055	0.59	+0.4
2,345,624	-		Pf1N1B4_2055	0.59	+0.7
2,345,641	+		Pf1N1B4_2055	0.60	-0.9
2,345,642	-		Pf1N1B4_2055	0.60	-0.0
2,345,642	-		Pf1N1B4_2055	0.60	+1.4
2,345,688	+		Pf1N1B4_2055	0.62	+0.1
2,345,688	+		Pf1N1B4_2055	0.62	-2.1
2,345,689	-		Pf1N1B4_2055	0.62	-1.1
2,345,722	+		Pf1N1B4_2055	0.64	+1.4
2,345,723	-		Pf1N1B4_2055	0.64	-0.2
2,345,723	-		Pf1N1B4_2055	0.64	+2.0
2,345,723	-		Pf1N1B4_2055	0.64	-0.4
2,345,816	-		Pf1N1B4_2055	0.69	+3.0
2,345,819	-		Pf1N1B4_2055	0.69	-1.2
2,345,819	-				+1.4
2,345,834	-		Pf1N1B4_2055	0.70	+1.4
2,345,911	+		Pf1N1B4_2055	0.74	-0.8
2,345,912	-		Pf1N1B4_2055	0.74	+1.0
2,345,912	-		Pf1N1B4_2055	0.74	+2.0
2,345,912	-		Pf1N1B4_2055	0.74	+0.4
2,345,914	+		Pf1N1B4_2055	0.74	+1.4
2,345,914	+		Pf1N1B4_2055	0.74	+0.4
2,345,914	+		Pf1N1B4_2055	0.74	-0.2
2,345,914	+		Pf1N1B4_2055	0.74	-0.2
2,345,914	+		Pf1N1B4_2055	0.74	+0.1
2,345,914	+		Pf1N1B4_2055	0.74	-0.3
2,345,914	+		Pf1N1B4_2055	0.74	+0.4
2,345,914	+		Pf1N1B4_2055	0.74	-0.4
2,345,915	-		Pf1N1B4_2055	0.74	+1.0
2,345,915	-		Pf1N1B4_2055	0.74	-1.6
2,345,915	-		Pf1N1B4_2055	0.74	+0.4
2,345,915	-		Pf1N1B4_2055	0.74	-1.0
2,345,915	-		Pf1N1B4_2055	0.74	+0.5
2,345,915	-		Pf1N1B4_2055	0.74	-0.9
2,345,980	+		Pf1N1B4_2055	0.77	+0.7
2,345,980	+		Pf1N1B4_2055	0.77	-0.1
2,345,980	+		Pf1N1B4_2055	0.77	-0.0
2,345,980	+		Pf1N1B4_2055	0.77	+2.2
2,346,143	-		Pf1N1B4_2055	0.86	-0.2
2,346,202	+		Pf1N1B4_2055	0.89	-0.6
2,346,304	+				+0.8
2,346,304	+				-0.3
2,346,305	-				-1.2
2,346,305	-				+0.4
2,346,305	-				+1.1
2,346,305	-				-0.2
2,346,305	-				-0.2
2,346,411	+				+1.7
2,346,411	+				-0.0
2,346,411	+				-0.2
2,346,412	-				+0.2
2,346,437	+				-0.6
2,346,507	+				+0.2
2,346,507	+				+1.1
2,346,507	+				+0.8
2,346,507	+				-0.9
2,346,507	+				+0.1
2,346,507	+				-0.6
2,346,510	-				+0.4
2,346,590	+				+0.7
2,346,591	-				+1.4
2,346,612	-				-0.3
2,347,235	+		Pf1N1B4_2056	0.24	-0.2
2,347,236	-		Pf1N1B4_2056	0.24	+1.4
2,347,325	+		Pf1N1B4_2056	0.27	-0.6
2,347,325	+		Pf1N1B4_2056	0.27	-0.6
2,347,325	+		Pf1N1B4_2056	0.27	+0.4
2,347,325	+		Pf1N1B4_2056	0.27	-0.9
2,347,325	+		Pf1N1B4_2056	0.27	-0.1
2,347,326	-		Pf1N1B4_2056	0.28	-0.1
2,347,326	-		Pf1N1B4_2056	0.28	-1.6
2,347,326	-		Pf1N1B4_2056	0.28	+0.8
2,347,326	-		Pf1N1B4_2056	0.28	+0.4
2,347,326	-		Pf1N1B4_2056	0.28	-0.9
2,347,326	-		Pf1N1B4_2056	0.28	-0.2