Experiment: Choline chloride 268.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02985 and AO353_02990 are separated by 506 nucleotides AO353_02990 and AO353_02995 are separated by 122 nucleotides
AO353_02985: AO353_02985 - threonine aldolase, at 633,066 to 634,070
_02985
AO353_02990: AO353_02990 - 6,7-dimethyl-8-ribityllumazine synthase, at 634,577 to 635,086
_02990
AO353_02995: AO353_02995 - succinylglutamate desuccinylase, at 635,209 to 636,219
_02995
Position (kb) 634
635
636 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 633.622 kb on + strand, within AO353_02985 at 633.623 kb on - strand, within AO353_02985 at 633.623 kb on - strand, within AO353_02985 at 633.623 kb on - strand, within AO353_02985 at 633.623 kb on - strand, within AO353_02985 at 633.636 kb on + strand, within AO353_02985 at 633.636 kb on + strand, within AO353_02985 at 633.636 kb on + strand, within AO353_02985 at 633.637 kb on - strand, within AO353_02985 at 633.637 kb on - strand, within AO353_02985 at 633.637 kb on - strand, within AO353_02985 at 633.805 kb on + strand, within AO353_02985 at 633.805 kb on + strand, within AO353_02985 at 633.805 kb on + strand, within AO353_02985 at 633.805 kb on + strand, within AO353_02985 at 633.805 kb on + strand, within AO353_02985 at 633.805 kb on + strand, within AO353_02985 at 633.806 kb on - strand, within AO353_02985 at 633.806 kb on - strand, within AO353_02985 at 633.806 kb on - strand, within AO353_02985 at 633.806 kb on - strand, within AO353_02985 at 633.806 kb on - strand, within AO353_02985 at 633.809 kb on + strand, within AO353_02985 at 633.809 kb on + strand, within AO353_02985 at 633.809 kb on + strand, within AO353_02985 at 633.809 kb on + strand, within AO353_02985 at 633.809 kb on + strand, within AO353_02985 at 633.809 kb on + strand, within AO353_02985 at 633.809 kb on + strand, within AO353_02985 at 633.809 kb on + strand at 633.809 kb on + strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.810 kb on - strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.811 kb on + strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.812 kb on - strand, within AO353_02985 at 633.838 kb on + strand, within AO353_02985 at 633.838 kb on + strand, within AO353_02985 at 633.838 kb on + strand, within AO353_02985 at 633.838 kb on + strand, within AO353_02985 at 633.838 kb on + strand, within AO353_02985 at 633.839 kb on - strand, within AO353_02985 at 633.839 kb on - strand, within AO353_02985 at 633.839 kb on - strand, within AO353_02985 at 633.839 kb on - strand, within AO353_02985 at 633.839 kb on - strand, within AO353_02985 at 633.839 kb on - strand, within AO353_02985 at 633.839 kb on - strand, within AO353_02985 at 633.839 kb on - strand, within AO353_02985 at 634.088 kb on - strand at 634.110 kb on + strand at 634.136 kb on + strand at 634.137 kb on - strand at 634.137 kb on - strand at 634.137 kb on - strand at 634.137 kb on - strand at 634.157 kb on + strand at 634.157 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.209 kb on + strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.210 kb on - strand at 634.211 kb on + strand at 634.211 kb on + strand at 634.212 kb on - strand at 634.212 kb on - strand at 634.212 kb on - strand at 634.212 kb on - strand at 634.245 kb on + strand at 634.245 kb on + strand at 634.245 kb on + strand at 634.245 kb on + strand at 634.245 kb on + strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.246 kb on - strand at 634.324 kb on + strand at 634.432 kb on + strand at 634.432 kb on + strand at 634.432 kb on + strand at 634.432 kb on + strand at 634.433 kb on - strand at 634.433 kb on - strand at 634.491 kb on + strand at 634.492 kb on - strand at 634.492 kb on - strand at 634.492 kb on - strand at 634.492 kb on - strand at 634.492 kb on - strand at 634.515 kb on + strand at 634.515 kb on + strand at 634.515 kb on + strand at 634.515 kb on + strand at 634.515 kb on + strand at 634.515 kb on + strand at 634.516 kb on - strand at 634.516 kb on - strand at 634.516 kb on - strand at 634.516 kb on - strand at 634.516 kb on - strand at 634.521 kb on + strand at 634.521 kb on + strand at 634.521 kb on + strand at 634.522 kb on - strand at 634.522 kb on - strand at 634.540 kb on - strand at 634.679 kb on - strand, within AO353_02990 at 634.824 kb on + strand, within AO353_02990 at 634.825 kb on - strand, within AO353_02990 at 634.844 kb on + strand, within AO353_02990 at 634.844 kb on + strand, within AO353_02990 at 634.844 kb on + strand, within AO353_02990 at 634.844 kb on + strand, within AO353_02990 at 634.844 kb on + strand, within AO353_02990 at 634.844 kb on + strand, within AO353_02990 at 634.845 kb on - strand, within AO353_02990 at 634.845 kb on - strand, within AO353_02990 at 634.845 kb on - strand, within AO353_02990 at 635.076 kb on + strand at 635.085 kb on - strand at 635.105 kb on + strand at 635.105 kb on + strand at 635.106 kb on - strand at 635.106 kb on - strand at 635.112 kb on - strand at 635.143 kb on + strand at 635.189 kb on + strand at 635.351 kb on + strand, within AO353_02995 at 635.352 kb on - strand, within AO353_02995 at 635.609 kb on + strand, within AO353_02995 at 635.609 kb on + strand, within AO353_02995 at 635.609 kb on + strand, within AO353_02995 at 635.610 kb on - strand, within AO353_02995 at 635.610 kb on - strand, within AO353_02995 at 635.610 kb on - strand, within AO353_02995 at 635.610 kb on - strand, within AO353_02995 at 635.610 kb on - strand, within AO353_02995 at 635.615 kb on + strand, within AO353_02995 at 635.616 kb on - strand, within AO353_02995 at 635.616 kb on - strand, within AO353_02995 at 635.726 kb on + strand, within AO353_02995 at 635.777 kb on + strand, within AO353_02995 at 635.778 kb on - strand, within AO353_02995 at 635.961 kb on + strand, within AO353_02995 at 635.961 kb on + strand, within AO353_02995 at 635.961 kb on + strand, within AO353_02995 at 635.961 kb on + strand, within AO353_02995 at 635.961 kb on + strand, within AO353_02995 at 635.961 kb on + strand, within AO353_02995 at 635.962 kb on - strand, within AO353_02995 at 635.962 kb on - strand, within AO353_02995 at 635.962 kb on - strand, within AO353_02995 at 636.017 kb on - strand, within AO353_02995 at 636.017 kb on - strand, within AO353_02995
Per-strain Table
Position Strand Gene LocusTag Fraction Choline chloride 268.5 mM remove 633,622 + AO353_02985 0.55 +0.8 633,623 - AO353_02985 0.55 -2.4 633,623 - AO353_02985 0.55 -1.7 633,623 - AO353_02985 0.55 -0.4 633,623 - AO353_02985 0.55 -0.5 633,636 + AO353_02985 0.57 -0.2 633,636 + AO353_02985 0.57 -0.1 633,636 + AO353_02985 0.57 +0.2 633,637 - AO353_02985 0.57 -3.0 633,637 - AO353_02985 0.57 -0.5 633,637 - AO353_02985 0.57 +0.8 633,805 + AO353_02985 0.74 -0.2 633,805 + AO353_02985 0.74 +1.4 633,805 + AO353_02985 0.74 -1.0 633,805 + AO353_02985 0.74 +1.2 633,805 + AO353_02985 0.74 +0.4 633,805 + AO353_02985 0.74 +0.2 633,806 - AO353_02985 0.74 +1.8 633,806 - AO353_02985 0.74 -0.2 633,806 - AO353_02985 0.74 -0.2 633,806 - AO353_02985 0.74 -0.8 633,806 - AO353_02985 0.74 -1.1 633,809 + AO353_02985 0.74 +0.8 633,809 + AO353_02985 0.74 +0.5 633,809 + AO353_02985 0.74 +0.0 633,809 + AO353_02985 0.74 -0.2 633,809 + AO353_02985 0.74 +0.5 633,809 + AO353_02985 0.74 +0.6 633,809 + AO353_02985 0.74 -1.7 633,809 + +1.8 633,809 + AO353_02985 0.74 +0.0 633,810 - AO353_02985 0.74 -0.6 633,810 - AO353_02985 0.74 -0.2 633,810 - AO353_02985 0.74 -0.4 633,810 - AO353_02985 0.74 +0.8 633,810 - AO353_02985 0.74 +0.5 633,810 - AO353_02985 0.74 -0.5 633,810 - AO353_02985 0.74 +1.1 633,810 - AO353_02985 0.74 +0.8 633,810 - AO353_02985 0.74 +1.4 633,811 + AO353_02985 0.74 +1.1 633,811 + AO353_02985 0.74 -0.0 633,811 + AO353_02985 0.74 +1.6 633,811 + AO353_02985 0.74 +0.1 633,811 + AO353_02985 0.74 +0.5 633,811 + AO353_02985 0.74 -1.2 633,811 + AO353_02985 0.74 -0.8 633,811 + AO353_02985 0.74 +0.4 633,811 + AO353_02985 0.74 +0.8 633,811 + AO353_02985 0.74 +0.5 633,811 + AO353_02985 0.74 +1.4 633,811 + AO353_02985 0.74 -0.5 633,811 + AO353_02985 0.74 +0.4 633,812 - AO353_02985 0.74 -0.1 633,812 - AO353_02985 0.74 -0.9 633,812 - AO353_02985 0.74 -0.7 633,812 - AO353_02985 0.74 +2.8 633,812 - AO353_02985 0.74 +1.0 633,812 - AO353_02985 0.74 -1.2 633,812 - AO353_02985 0.74 -0.7 633,812 - AO353_02985 0.74 -0.1 633,812 - AO353_02985 0.74 +1.5 633,812 - AO353_02985 0.74 -0.1 633,812 - AO353_02985 0.74 +0.2 633,812 - AO353_02985 0.74 -0.7 633,812 - AO353_02985 0.74 -0.8 633,812 - AO353_02985 0.74 -0.1 633,812 - AO353_02985 0.74 +0.6 633,812 - AO353_02985 0.74 +0.8 633,812 - AO353_02985 0.74 +0.8 633,812 - AO353_02985 0.74 -0.2 633,812 - AO353_02985 0.74 +0.8 633,812 - AO353_02985 0.74 +0.8 633,812 - AO353_02985 0.74 +0.5 633,812 - AO353_02985 0.74 -0.8 633,812 - AO353_02985 0.74 -2.4 633,812 - AO353_02985 0.74 -1.5 633,812 - AO353_02985 0.74 +0.4 633,812 - AO353_02985 0.74 +0.5 633,838 + AO353_02985 0.77 -0.8 633,838 + AO353_02985 0.77 -0.8 633,838 + AO353_02985 0.77 +1.2 633,838 + AO353_02985 0.77 +0.8 633,838 + AO353_02985 0.77 -0.2 633,839 - AO353_02985 0.77 +0.5 633,839 - AO353_02985 0.77 +0.3 633,839 - AO353_02985 0.77 +1.1 633,839 - AO353_02985 0.77 -0.7 633,839 - AO353_02985 0.77 -0.8 633,839 - AO353_02985 0.77 -1.0 633,839 - AO353_02985 0.77 -2.5 633,839 - AO353_02985 0.77 -0.7 634,088 - +0.8 634,110 + +0.8 634,136 + +1.1 634,137 - +0.7 634,137 - +0.3 634,137 - -0.1 634,137 - +1.1 634,157 + -0.4 634,157 + +0.4 634,209 + -0.8 634,209 + +2.4 634,209 + +0.6 634,209 + -0.1 634,209 + -1.2 634,209 + +0.3 634,209 + -1.2 634,209 + +0.2 634,209 + -0.4 634,209 + -0.1 634,209 + +0.8 634,209 + -1.1 634,209 + -0.8 634,209 + -0.8 634,209 + -0.4 634,209 + -0.2 634,209 + -0.2 634,209 + -0.3 634,210 - +1.2 634,210 - -1.8 634,210 - -0.8 634,210 - +0.8 634,210 - -0.2 634,210 - +0.3 634,210 - -0.2 634,210 - +1.4 634,210 - +0.8 634,210 - -0.1 634,210 - +1.2 634,210 - -1.8 634,210 - +1.8 634,210 - -1.5 634,210 - -0.9 634,210 - +0.4 634,210 - +0.1 634,210 - +1.1 634,210 - +0.7 634,210 - +0.2 634,210 - +0.1 634,210 - +0.8 634,210 - +1.1 634,210 - +0.8 634,210 - +1.2 634,210 - +1.0 634,210 - +0.2 634,211 + +1.4 634,211 + +0.2 634,212 - +1.1 634,212 - +2.6 634,212 - +1.8 634,212 - +0.5 634,245 + +0.8 634,245 + +2.4 634,245 + -0.2 634,245 + -0.8 634,245 + +1.0 634,246 - -0.5 634,246 - -0.2 634,246 - +1.5 634,246 - -1.8 634,246 - +0.3 634,246 - +0.1 634,246 - -0.5 634,246 - +0.2 634,246 - -0.0 634,246 - +0.5 634,246 - -0.5 634,246 - +0.8 634,246 - +1.8 634,246 - +0.2 634,324 + +0.3 634,432 + +1.4 634,432 + -1.2 634,432 + -1.2 634,432 + -0.2 634,433 - -0.6 634,433 - -0.3 634,491 + +0.2 634,492 - +1.8 634,492 - +1.0 634,492 - +0.5 634,492 - -0.7 634,492 - -1.5 634,515 + +0.1 634,515 + -0.2 634,515 + +1.1 634,515 + -1.5 634,515 + +0.8 634,515 + +0.6 634,516 - +0.2 634,516 - -0.2 634,516 - +0.8 634,516 - +0.8 634,516 - -1.8 634,521 + -0.8 634,521 + +0.2 634,521 + +0.2 634,522 - -0.7 634,522 - +1.4 634,540 - +2.0 634,679 - AO353_02990 0.20 +0.8 634,824 + AO353_02990 0.48 +1.9 634,825 - AO353_02990 0.49 -0.8 634,844 + AO353_02990 0.52 +0.8 634,844 + AO353_02990 0.52 -1.2 634,844 + AO353_02990 0.52 -0.1 634,844 + AO353_02990 0.52 -0.8 634,844 + AO353_02990 0.52 +0.8 634,844 + AO353_02990 0.52 +0.5 634,845 - AO353_02990 0.53 +2.8 634,845 - AO353_02990 0.53 -0.3 634,845 - AO353_02990 0.53 +0.4 635,076 + -0.5 635,085 - -0.4 635,105 + -0.0 635,105 + -0.3 635,106 - +0.2 635,106 - -1.2 635,112 - -1.2 635,143 + +0.4 635,189 + +1.4 635,351 + AO353_02995 0.14 -1.0 635,352 - AO353_02995 0.14 -0.4 635,609 + AO353_02995 0.40 -1.0 635,609 + AO353_02995 0.40 -0.2 635,609 + AO353_02995 0.40 -1.5 635,610 - AO353_02995 0.40 -0.8 635,610 - AO353_02995 0.40 +0.8 635,610 - AO353_02995 0.40 +0.4 635,610 - AO353_02995 0.40 -1.8 635,610 - AO353_02995 0.40 +2.1 635,615 + AO353_02995 0.40 -0.5 635,616 - AO353_02995 0.40 +0.8 635,616 - AO353_02995 0.40 +0.8 635,726 + AO353_02995 0.51 -0.3 635,777 + AO353_02995 0.56 -1.2 635,778 - AO353_02995 0.56 -0.2 635,961 + AO353_02995 0.74 -0.8 635,961 + AO353_02995 0.74 -0.2 635,961 + AO353_02995 0.74 -0.7 635,961 + AO353_02995 0.74 -0.8 635,961 + AO353_02995 0.74 -1.5 635,961 + AO353_02995 0.74 +1.0 635,962 - AO353_02995 0.74 -1.0 635,962 - AO353_02995 0.74 +0.1 635,962 - AO353_02995 0.74 +0.4 636,017 - AO353_02995 0.80 -0.1 636,017 - AO353_02995 0.80 +1.4
Or see this region's nucleotide sequence