Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2960

Experiment: Tween 20 (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20 (C)
3,313,509	-		Pf1N1B4_2959	0.51	+0.1
3,313,883	-		Pf1N1B4_2959	0.71	-0.9
3,314,199	+		Pf1N1B4_2959	0.88	+0.1
3,314,378	+				-2.5
3,314,432	+				+0.8
3,314,432	+				-0.7
3,314,433	-				-2.8
3,314,433	-				-1.5
3,314,433	-				-1.9
3,314,433	-				-2.5
3,314,433	-				-2.2
3,314,441	+				-0.9
3,314,441	+				+0.1
3,314,441	+				+0.1
3,314,442	-				-1.9
3,314,442	-				-0.3
3,314,462	+				-1.9
3,314,462	+				+0.1
3,314,463	-				-2.4
3,314,463	-				-2.2
3,314,470	+				-1.9
3,314,739	+		Pf1N1B4_2960	0.20	-0.9
3,314,740	-		Pf1N1B4_2960	0.20	-0.9
3,314,812	-		Pf1N1B4_2960	0.26	-0.9
3,314,882	+		Pf1N1B4_2960	0.31	-1.2
3,315,057	+		Pf1N1B4_2960	0.44	-2.0
3,315,057	+		Pf1N1B4_2960	0.44	-2.5
3,315,057	+		Pf1N1B4_2960	0.44	+0.1
3,315,099	+		Pf1N1B4_2960	0.47	-1.9
3,315,100	-				+0.1
3,315,132	+		Pf1N1B4_2960	0.49	-2.5
3,315,132	+		Pf1N1B4_2960	0.49	-0.8
3,315,133	-		Pf1N1B4_2960	0.49	-2.5
3,315,133	-		Pf1N1B4_2960	0.49	-2.2
3,315,133	-		Pf1N1B4_2960	0.49	-0.9
3,315,234	+		Pf1N1B4_2960	0.56	-0.9
3,315,235	-		Pf1N1B4_2960	0.57	-0.9
3,315,235	-		Pf1N1B4_2960	0.57	+0.1
3,315,280	-		Pf1N1B4_2960	0.60	-2.6
3,315,280	-		Pf1N1B4_2960	0.60	-0.9
3,315,280	-		Pf1N1B4_2960	0.60	-0.9
3,315,280	-		Pf1N1B4_2960	0.60	-1.9
3,315,280	-		Pf1N1B4_2960	0.60	-1.5
3,315,280	-		Pf1N1B4_2960	0.60	-2.2
3,315,336	+		Pf1N1B4_2960	0.64	-3.1
3,315,336	+		Pf1N1B4_2960	0.64	+0.1
3,315,336	+		Pf1N1B4_2960	0.64	-3.4
3,315,336	+				-1.5
3,315,336	+		Pf1N1B4_2960	0.64	-0.9
3,315,336	+		Pf1N1B4_2960	0.64	+0.5
3,315,336	+		Pf1N1B4_2960	0.64	-0.9
3,315,336	+		Pf1N1B4_2960	0.64	-0.9
3,315,336	+		Pf1N1B4_2960	0.64	-1.5
3,315,336	+				-0.9
3,315,336	+		Pf1N1B4_2960	0.64	-2.2
3,315,336	+		Pf1N1B4_2960	0.64	-2.1
3,315,336	+		Pf1N1B4_2960	0.64	-2.2
3,315,337	-		Pf1N1B4_2960	0.64	-2.2
3,315,337	-				-1.5
3,315,337	-		Pf1N1B4_2960	0.64	-1.9
3,315,337	-		Pf1N1B4_2960	0.64	-1.9
3,315,337	-		Pf1N1B4_2960	0.64	-1.5
3,315,337	-		Pf1N1B4_2960	0.64	-0.9
3,315,337	-		Pf1N1B4_2960	0.64	-1.5
3,315,390	+		Pf1N1B4_2960	0.68	-2.9
3,315,390	+		Pf1N1B4_2960	0.68	-1.2
3,315,390	+		Pf1N1B4_2960	0.68	-1.5
3,315,390	+		Pf1N1B4_2960	0.68	-0.9
3,315,390	+		Pf1N1B4_2960	0.68	-1.9
3,315,390	+		Pf1N1B4_2960	0.68	-3.2
3,315,390	+		Pf1N1B4_2960	0.68	-1.9
3,315,390	+		Pf1N1B4_2960	0.68	-2.9
3,315,390	+		Pf1N1B4_2960	0.68	-2.9
3,315,390	+		Pf1N1B4_2960	0.68	-2.7
3,315,390	+		Pf1N1B4_2960	0.68	-1.5
3,315,390	+		Pf1N1B4_2960	0.68	-1.9
3,315,391	-		Pf1N1B4_2960	0.68	-0.9
3,315,391	-		Pf1N1B4_2960	0.68	-0.5
3,315,391	-		Pf1N1B4_2960	0.68	-1.5
3,315,391	-		Pf1N1B4_2960	0.68	-3.2
3,315,391	-		Pf1N1B4_2960	0.68	-0.5
3,315,391	-				-0.9
3,315,391	-		Pf1N1B4_2960	0.68	+0.1
3,315,391	-		Pf1N1B4_2960	0.68	-3.1
3,315,408	+		Pf1N1B4_2960	0.69	+0.1
3,315,408	+		Pf1N1B4_2960	0.69	-0.9
3,315,408	+		Pf1N1B4_2960	0.69	-2.2
3,315,408	+		Pf1N1B4_2960	0.69	-4.0
3,315,408	+		Pf1N1B4_2960	0.69	-1.9
3,315,408	+		Pf1N1B4_2960	0.69	-2.4
3,315,408	+		Pf1N1B4_2960	0.69	-3.4
3,315,408	+		Pf1N1B4_2960	0.69	-2.1
3,315,409	-		Pf1N1B4_2960	0.69	-1.9
3,315,409	-		Pf1N1B4_2960	0.69	-3.9
3,315,409	-		Pf1N1B4_2960	0.69	-3.7
3,315,435	+				-0.9
3,315,543	+		Pf1N1B4_2960	0.79	-0.9
3,315,543	+		Pf1N1B4_2960	0.79	-2.2
3,315,543	+		Pf1N1B4_2960	0.79	+0.1
3,315,543	+		Pf1N1B4_2960	0.79	-1.5
3,315,544	-		Pf1N1B4_2960	0.79	-1.9
3,315,544	-		Pf1N1B4_2960	0.79	-1.5
3,315,561	+		Pf1N1B4_2960	0.80	-2.2
3,315,561	+		Pf1N1B4_2960	0.80	-3.1
3,315,561	+		Pf1N1B4_2960	0.80	-3.1
3,315,561	+		Pf1N1B4_2960	0.80	-1.5
3,315,561	+				-2.5
3,315,562	-		Pf1N1B4_2960	0.81	+0.1
3,315,562	-		Pf1N1B4_2960	0.81	-1.9
3,315,562	-		Pf1N1B4_2960	0.81	-0.7
3,315,562	-		Pf1N1B4_2960	0.81	-0.9
3,315,604	-		Pf1N1B4_2960	0.84	-2.5
3,315,604	-		Pf1N1B4_2960	0.84	-3.2
3,315,654	+				-1.5
3,315,654	+		Pf1N1B4_2960	0.87	-3.7
3,315,654	+		Pf1N1B4_2960	0.87	-1.9
3,315,654	+		Pf1N1B4_2960	0.87	-2.2
3,315,654	+		Pf1N1B4_2960	0.87	-0.5
3,315,654	+		Pf1N1B4_2960	0.87	-1.9
3,315,655	-		Pf1N1B4_2960	0.87	-0.9
3,315,655	-		Pf1N1B4_2960	0.87	-2.2
3,315,655	-		Pf1N1B4_2960	0.87	-2.2
3,315,655	-		Pf1N1B4_2960	0.87	-0.9
3,315,655	-		Pf1N1B4_2960	0.87	-2.2
3,315,655	-		Pf1N1B4_2960	0.87	-1.9
3,315,655	-		Pf1N1B4_2960	0.87	-2.9
3,315,655	-		Pf1N1B4_2960	0.87	-0.9
3,315,657	+		Pf1N1B4_2960	0.87	-2.5
3,315,657	+		Pf1N1B4_2960	0.87	-1.5
3,315,657	+		Pf1N1B4_2960	0.87	+1.7
3,315,657	+		Pf1N1B4_2960	0.87	-1.9
3,315,658	-		Pf1N1B4_2960	0.88	-2.4
3,315,678	+		Pf1N1B4_2960	0.89	-1.2
3,315,696	+				-0.9
3,315,696	+				-0.9
3,315,696	+				+0.1
3,315,696	+				+0.1
3,315,697	-				-2.2
3,315,697	-				-1.9
3,315,756	+				-0.9
3,315,756	+				-0.3
3,315,756	+				-0.7
3,315,756	+				-1.9
3,315,758	+				-0.3
3,315,758	+				-2.2
3,315,758	+				-2.7
3,315,758	+				-0.9
3,315,758	+				-2.2
3,315,758	+				-3.4
3,315,758	+				-2.7
3,315,758	+				+1.3
3,315,758	+				-1.9
3,315,759	-				+0.1
3,315,759	-				-2.5
3,315,759	-				-0.9
3,315,759	-				-0.9
3,315,759	-				-1.9
3,315,759	-				+0.1
3,315,759	-				-1.5
3,315,759	-				+0.1
3,315,759	-				-0.9
3,315,828	+				-0.9
3,315,828	+				-1.7
3,315,828	+				-0.3
3,315,828	+				+0.1
3,315,828	+				-0.1
3,315,828	+				-2.7
3,315,828	+				+0.3
3,315,829	-				-2.7
3,315,829	-				+0.4
3,315,829	-				+0.5
3,315,829	-				-0.5
3,315,829	-				-0.5
3,315,829	-				-0.3
3,315,829	-				+0.1
3,315,835	+				-0.7
3,315,836	-				+0.1
3,315,836	-				+0.7
3,315,922	+				-0.5
3,315,922	+				-0.5
3,315,922	+				-0.9
3,315,929	+				-0.2
3,315,930	-				-0.2
3,315,931	+				-0.5
3,315,931	+				+0.5
3,315,931	+				-0.2
3,315,931	+				+2.9
3,315,931	+				-2.2
3,315,931	+				-0.5
3,315,931	+				+2.1
3,315,931	+				-0.9
3,315,931	+				+0.7
3,315,931	+				-1.2
3,315,931	+				-2.2
3,315,931	+				-1.9
3,315,932	-				+2.4
3,315,932	-				-1.5
3,315,932	-				-1.2
3,315,932	-				-1.5
3,315,932	-				+0.1
3,315,932	-				+0.1
3,315,932	-				-0.9
3,315,932	-				-0.3
3,315,932	-				+0.1
3,315,932	-				+0.1
3,315,932	-				-1.2
3,315,932	-				-1.1
3,315,932	-				-0.6
3,315,932	-				-0.5
3,315,932	-				-1.5
3,315,932	-				-1.5
3,315,932	-				-0.9
3,315,967	+				+0.7
3,316,012	+				+0.1
3,316,013	-				+0.3
3,316,013	-				-1.5
3,316,013	-				+0.8
3,316,036	-				-0.5
3,316,057	-				+0.1
3,316,062	+				-0.7
3,316,063	-				-1.5
3,316,063	-				-2.4
3,316,063	-				-0.9
3,316,072	+				-0.9
3,316,072	+				-0.2
3,316,072	+				+0.1
3,316,072	+				-0.7
3,316,073	-				-1.2
3,316,073	-				-1.5
3,316,073	-				-1.5
3,316,073	-				-0.9
3,316,449	+				-0.9
3,316,449	+		Pf1N1B4_2961	0.11	+0.1
3,316,449	+		Pf1N1B4_2961	0.11	-2.7
3,316,449	+		Pf1N1B4_2961	0.11	+0.4
3,316,585	+		Pf1N1B4_2961	0.16	-1.3
3,316,603	-		Pf1N1B4_2961	0.17	-0.9
3,316,603	-		Pf1N1B4_2961	0.17	-0.5