Experiment: PBS control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Xcc-8004.3364.1 and Xcc-8004.3365.1 are separated by 134 nucleotides Xcc-8004.3365.1 and Xcc-8004.3366.1 are separated by 190 nucleotides Xcc-8004.3366.1 and Xcc-8004.3367.1 are separated by 178 nucleotides
Xcc-8004.3364.1: Xcc-8004.3364.1 - Phosphate transport system regulatory protein PhoU, at 3,257,752 to 3,258,462
Xcc-8004.3364.1
Xcc-8004.3365.1: Xcc-8004.3365.1 - FIG01209831: hypothetical protein, at 3,258,597 to 3,259,001
Xcc-8004.3365.1
Xcc-8004.3366.1: Xcc-8004.3366.1 - Ribonuclease T (EC 3.1.13.-), at 3,259,192 to 3,259,791
Xcc-8004.3366.1
Xcc-8004.3367.1: Xcc-8004.3367.1 - GGDEF family protein, at 3,259,970 to 3,263,005
Xcc-8004.3367.1
Position (kb) 3259
3260 Strain fitness (log2 ratio) -2
-1
0
1
2 at 3258.248 kb on - strand, within Xcc-8004.3364.1 at 3258.277 kb on + strand, within Xcc-8004.3364.1 at 3258.277 kb on + strand, within Xcc-8004.3364.1 at 3258.277 kb on + strand, within Xcc-8004.3364.1 at 3258.277 kb on + strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.278 kb on - strand, within Xcc-8004.3364.1 at 3258.300 kb on + strand, within Xcc-8004.3364.1 at 3258.524 kb on - strand at 3258.524 kb on - strand at 3258.531 kb on + strand at 3258.532 kb on - strand at 3258.541 kb on + strand at 3258.541 kb on + strand at 3258.550 kb on - strand at 3258.945 kb on + strand, within Xcc-8004.3365.1 at 3258.945 kb on + strand, within Xcc-8004.3365.1 at 3258.945 kb on + strand, within Xcc-8004.3365.1 at 3258.945 kb on + strand, within Xcc-8004.3365.1 at 3258.945 kb on + strand, within Xcc-8004.3365.1 at 3258.945 kb on + strand, within Xcc-8004.3365.1 at 3258.945 kb on + strand, within Xcc-8004.3365.1 at 3258.946 kb on - strand, within Xcc-8004.3365.1 at 3258.946 kb on - strand, within Xcc-8004.3365.1 at 3258.946 kb on - strand, within Xcc-8004.3365.1 at 3258.946 kb on - strand, within Xcc-8004.3365.1 at 3259.003 kb on - strand at 3259.135 kb on + strand at 3259.135 kb on + strand at 3259.187 kb on + strand at 3259.492 kb on + strand, within Xcc-8004.3366.1 at 3259.492 kb on + strand, within Xcc-8004.3366.1 at 3259.492 kb on + strand, within Xcc-8004.3366.1 at 3259.493 kb on - strand, within Xcc-8004.3366.1 at 3259.717 kb on + strand, within Xcc-8004.3366.1 at 3259.717 kb on + strand, within Xcc-8004.3366.1 at 3259.717 kb on + strand, within Xcc-8004.3366.1 at 3259.717 kb on + strand, within Xcc-8004.3366.1 at 3259.718 kb on - strand, within Xcc-8004.3366.1 at 3259.718 kb on - strand, within Xcc-8004.3366.1 at 3259.718 kb on - strand, within Xcc-8004.3366.1 at 3259.718 kb on - strand, within Xcc-8004.3366.1 at 3259.718 kb on - strand, within Xcc-8004.3366.1 at 3259.818 kb on + strand at 3259.828 kb on + strand at 3259.828 kb on + strand at 3259.829 kb on - strand at 3259.891 kb on + strand at 3259.892 kb on - strand at 3259.892 kb on - strand at 3259.892 kb on - strand at 3259.913 kb on + strand at 3259.913 kb on + strand at 3259.913 kb on + strand at 3259.971 kb on + strand at 3259.979 kb on - strand at 3260.013 kb on + strand at 3260.013 kb on + strand at 3260.013 kb on + strand at 3260.014 kb on - strand at 3260.308 kb on - strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.336 kb on + strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.337 kb on - strand, within Xcc-8004.3367.1 at 3260.388 kb on - strand, within Xcc-8004.3367.1 at 3260.604 kb on + strand, within Xcc-8004.3367.1 at 3260.604 kb on + strand, within Xcc-8004.3367.1 at 3260.604 kb on + strand, within Xcc-8004.3367.1 at 3260.605 kb on - strand, within Xcc-8004.3367.1 at 3260.625 kb on + strand, within Xcc-8004.3367.1 at 3260.626 kb on - strand, within Xcc-8004.3367.1 at 3260.776 kb on - strand, within Xcc-8004.3367.1 at 3260.776 kb on - strand, within Xcc-8004.3367.1
Per-strain Table
Position Strand Gene LocusTag Fraction PBS control remove 3,258,248 - Xcc-8004.3364.1 0.70 +0.0 3,258,277 + Xcc-8004.3364.1 0.74 +0.3 3,258,277 + Xcc-8004.3364.1 0.74 +0.2 3,258,277 + Xcc-8004.3364.1 0.74 +0.0 3,258,277 + Xcc-8004.3364.1 0.74 -0.3 3,258,278 - Xcc-8004.3364.1 0.74 +0.1 3,258,278 - Xcc-8004.3364.1 0.74 -0.4 3,258,278 - Xcc-8004.3364.1 0.74 +0.1 3,258,278 - Xcc-8004.3364.1 0.74 -0.5 3,258,278 - Xcc-8004.3364.1 0.74 -0.1 3,258,278 - Xcc-8004.3364.1 0.74 -1.5 3,258,278 - Xcc-8004.3364.1 0.74 -0.1 3,258,278 - Xcc-8004.3364.1 0.74 +1.1 3,258,278 - Xcc-8004.3364.1 0.74 +1.7 3,258,300 + Xcc-8004.3364.1 0.77 +0.9 3,258,524 - -0.5 3,258,524 - +0.3 3,258,531 + +0.9 3,258,532 - -0.1 3,258,541 + +0.2 3,258,541 + +0.5 3,258,550 - +2.1 3,258,945 + Xcc-8004.3365.1 0.86 -0.1 3,258,945 + Xcc-8004.3365.1 0.86 +0.1 3,258,945 + Xcc-8004.3365.1 0.86 +0.1 3,258,945 + Xcc-8004.3365.1 0.86 +0.3 3,258,945 + Xcc-8004.3365.1 0.86 +2.7 3,258,945 + Xcc-8004.3365.1 0.86 -0.4 3,258,945 + Xcc-8004.3365.1 0.86 +2.2 3,258,946 - Xcc-8004.3365.1 0.86 +0.1 3,258,946 - Xcc-8004.3365.1 0.86 -0.8 3,258,946 - Xcc-8004.3365.1 0.86 +0.5 3,258,946 - Xcc-8004.3365.1 0.86 +0.1 3,259,003 - +0.2 3,259,135 + +0.9 3,259,135 + +0.8 3,259,187 + +0.5 3,259,492 + Xcc-8004.3366.1 0.50 -0.5 3,259,492 + Xcc-8004.3366.1 0.50 -0.2 3,259,492 + Xcc-8004.3366.1 0.50 -0.9 3,259,493 - Xcc-8004.3366.1 0.50 -0.5 3,259,717 + Xcc-8004.3366.1 0.88 -1.2 3,259,717 + Xcc-8004.3366.1 0.88 -0.3 3,259,717 + Xcc-8004.3366.1 0.88 +0.1 3,259,717 + Xcc-8004.3366.1 0.88 +0.2 3,259,718 - Xcc-8004.3366.1 0.88 -0.6 3,259,718 - Xcc-8004.3366.1 0.88 -2.6 3,259,718 - Xcc-8004.3366.1 0.88 -1.0 3,259,718 - Xcc-8004.3366.1 0.88 -0.4 3,259,718 - Xcc-8004.3366.1 0.88 -0.7 3,259,818 + -0.4 3,259,828 + +1.1 3,259,828 + +0.1 3,259,829 - +0.1 3,259,891 + +0.3 3,259,892 - -0.8 3,259,892 - +0.3 3,259,892 - +0.0 3,259,913 + -0.0 3,259,913 + -0.6 3,259,913 + +0.5 3,259,971 + -0.9 3,259,979 - -0.8 3,260,013 + +0.4 3,260,013 + -0.1 3,260,013 + +0.1 3,260,014 - -0.9 3,260,308 - Xcc-8004.3367.1 0.11 +0.7 3,260,336 + Xcc-8004.3367.1 0.12 -0.2 3,260,336 + Xcc-8004.3367.1 0.12 +0.7 3,260,336 + Xcc-8004.3367.1 0.12 +2.1 3,260,336 + Xcc-8004.3367.1 0.12 +0.1 3,260,336 + Xcc-8004.3367.1 0.12 +0.9 3,260,336 + Xcc-8004.3367.1 0.12 -1.0 3,260,336 + Xcc-8004.3367.1 0.12 -0.9 3,260,336 + Xcc-8004.3367.1 0.12 -1.5 3,260,336 + Xcc-8004.3367.1 0.12 -1.8 3,260,336 + Xcc-8004.3367.1 0.12 +0.9 3,260,337 - Xcc-8004.3367.1 0.12 -0.7 3,260,337 - Xcc-8004.3367.1 0.12 -0.7 3,260,337 - Xcc-8004.3367.1 0.12 +0.5 3,260,337 - Xcc-8004.3367.1 0.12 +0.1 3,260,337 - Xcc-8004.3367.1 0.12 +0.7 3,260,337 - Xcc-8004.3367.1 0.12 +0.8 3,260,337 - Xcc-8004.3367.1 0.12 -1.7 3,260,337 - Xcc-8004.3367.1 0.12 -1.1 3,260,337 - Xcc-8004.3367.1 0.12 +0.3 3,260,337 - Xcc-8004.3367.1 0.12 -1.1 3,260,337 - Xcc-8004.3367.1 0.12 -1.1 3,260,337 - Xcc-8004.3367.1 0.12 +1.1 3,260,388 - Xcc-8004.3367.1 0.14 +0.3 3,260,604 + Xcc-8004.3367.1 0.21 -0.5 3,260,604 + Xcc-8004.3367.1 0.21 +0.4 3,260,604 + Xcc-8004.3367.1 0.21 +0.8 3,260,605 - Xcc-8004.3367.1 0.21 -0.3 3,260,625 + Xcc-8004.3367.1 0.22 +0.7 3,260,626 - Xcc-8004.3367.1 0.22 +0.4 3,260,776 - Xcc-8004.3367.1 0.27 -1.7 3,260,776 - Xcc-8004.3367.1 0.27 -0.6
Or see this region's nucleotide sequence