Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1338

Experiment: Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.5 mg/ml
1,371,871	+		Synpcc7942_1337	0.80	+0.6
1,371,884	-		Synpcc7942_1337	0.81	+0.8
1,371,894	+		Synpcc7942_1337	0.81	+0.2
1,371,894	+		Synpcc7942_1337	0.81	-0.6
1,371,902	-		Synpcc7942_1337	0.81	-0.1
1,371,918	+		Synpcc7942_1337	0.81	+0.1
1,371,918	+		Synpcc7942_1337	0.81	-0.1
1,371,925	+		Synpcc7942_1337	0.82	+0.4
1,371,926	-		Synpcc7942_1337	0.82	+1.4
1,371,933	-		Synpcc7942_1337	0.82	-0.1
1,371,937	+		Synpcc7942_1337	0.82	-0.1
1,371,955	-		Synpcc7942_1337	0.82	+1.2
1,371,962	-		Synpcc7942_1337	0.82	+0.5
1,371,983	-		Synpcc7942_1337	0.83	+0.3
1,371,983	-		Synpcc7942_1337	0.83	-1.0
1,372,003	-		Synpcc7942_1337	0.83	-0.5
1,372,061	-		Synpcc7942_1337	0.85	-2.1
1,372,074	-		Synpcc7942_1337	0.85	+0.7
1,372,083	+		Synpcc7942_1337	0.85	-0.8
1,372,089	+		Synpcc7942_1337	0.85	-0.2
1,372,094	+		Synpcc7942_1337	0.86	+0.6
1,372,119	+		Synpcc7942_1337	0.86	-1.1
1,372,135	+		Synpcc7942_1337	0.87	+0.2
1,372,147	+		Synpcc7942_1337	0.87	+1.3
1,372,147	+		Synpcc7942_1337	0.87	-0.3
1,372,148	+		Synpcc7942_1337	0.87	+1.7
1,372,148	+		Synpcc7942_1337	0.87	-0.5
1,372,155	-		Synpcc7942_1337	0.87	-0.5
1,372,202	-		Synpcc7942_1337	0.88	+0.9
1,372,218	+		Synpcc7942_1337	0.88	+0.9
1,372,235	+		Synpcc7942_1337	0.89	-1.6
1,372,243	-		Synpcc7942_1337	0.89	-3.9
1,372,248	-		Synpcc7942_1337	0.89	+0.2
1,372,345	-				+2.4
1,372,364	-				+1.3
1,372,369	-				-0.1
1,372,371	+				+0.8
1,372,379	-				+1.9
1,372,481	+				-0.9
1,372,518	+				-0.6
1,372,518	+				+0.7
1,372,572	+				+0.5
1,372,579	-				+1.9
1,372,598	-				+0.4
1,372,608	-				-0.5
1,372,613	-				+1.2
1,372,633	-				-0.1
1,372,672	-				+1.1
1,372,681	-				-1.3
1,372,703	-				+0.4
1,372,709	+				+1.7
1,372,741	+				+1.4
1,372,780	+				+0.0
1,372,806	-				+0.5
1,372,807	-				-1.4
1,372,809	+				+1.5
1,372,817	-				-0.1
1,372,837	+				-3.5
1,372,871	+				-1.2
1,372,886	+				+0.7
1,372,894	-				-0.1
1,372,928	-				-1.1
1,372,947	+		Synpcc7942_1338	0.11	-2.8
1,372,948	-		Synpcc7942_1338	0.11	-3.8
1,372,952	+		Synpcc7942_1338	0.11	-3.2
1,372,955	-		Synpcc7942_1338	0.12	-2.6
1,372,957	+		Synpcc7942_1338	0.12	-2.9
1,372,965	-		Synpcc7942_1338	0.13	-1.2
1,373,014	+		Synpcc7942_1338	0.19	-2.8
1,373,014	+		Synpcc7942_1338	0.19	-1.6
1,373,014	+		Synpcc7942_1338	0.19	-2.4
1,373,062	+		Synpcc7942_1338	0.25	-2.1
1,373,067	+		Synpcc7942_1338	0.26	-2.9
1,373,075	-		Synpcc7942_1338	0.27	-2.1
1,373,107	-		Synpcc7942_1338	0.31	-2.1
1,373,135	-		Synpcc7942_1338	0.35	-0.5
1,373,581	-				-2.6
1,373,736	-				+0.4
1,373,756	+				-1.5
1,373,777	+				-0.4
1,373,777	+				-4.6
1,373,777	+				-1.6
1,373,777	+				-1.4
1,373,777	+				-2.8
1,373,782	+				-4.8
1,373,785	-				-1.1
1,373,785	-				-0.1
1,373,785	-				-3.5
1,373,785	-				-0.4
1,373,785	-				-3.1
1,373,785	-				+1.9
1,373,785	-				+1.5
1,373,785	-				-2.6
1,373,785	-				-1.1
1,373,790	-				-0.4
1,373,828	+		Synpcc7942_1339	0.25	-1.1
1,373,828	+		Synpcc7942_1339	0.25	-1.4
1,373,867	-		Synpcc7942_1339	0.45	-3.4
1,373,869	+		Synpcc7942_1339	0.46	-3.5
1,373,871	+		Synpcc7942_1339	0.47	-1.6
1,373,871	+		Synpcc7942_1339	0.47	+0.3
1,373,876	+		Synpcc7942_1339	0.50	+0.5
1,373,879	-		Synpcc7942_1339	0.51	-1.1
1,373,882	+		Synpcc7942_1339	0.53	-2.4
1,373,901	-		Synpcc7942_1339	0.63	-1.4
1,373,922	+		Synpcc7942_1339	0.73	-0.5
1,373,935	-		Synpcc7942_1339	0.80	-0.9
1,373,935	-		Synpcc7942_1339	0.80	-2.1
1,373,937	+		Synpcc7942_1339	0.81	-2.3
1,373,963	+				-3.1
1,374,023	-				-2.5
1,374,029	-				-2.4
1,374,029	-				-1.1
1,374,035	+				+0.8
1,374,035	+				+0.9
1,374,037	-				+1.8
1,374,088	-				-1.8
1,374,635	+				-1.1
1,374,635	+				-0.4