Experiment: R2A with Nickel (II) chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03360 and RR42_RS03365 are separated by 103 nucleotides RR42_RS03365 and RR42_RS03370 are separated by 39 nucleotides
RR42_RS03360: RR42_RS03360 - fructose ABC transporter, ATPase component (FrcA) <small>(from data)</small>, at 746,637 to 748,250
_RS03360
RR42_RS03365: RR42_RS03365 - fructose ABC transporter, permease component (FrcC) <small>(from data)</small>, at 748,354 to 749,355
_RS03365
RR42_RS03370: RR42_RS03370 - fructose ABC transporter, substrate-binding component (FrcB) <small>(from data)</small>, at 749,395 to 750,372
_RS03370
Position (kb) 748
749
750 Strain fitness (log2 ratio) -2
-1
0
1 at 747.390 kb on + strand, within RR42_RS03360 at 747.390 kb on + strand, within RR42_RS03360 at 747.390 kb on + strand, within RR42_RS03360 at 747.675 kb on + strand, within RR42_RS03360 at 748.467 kb on - strand, within RR42_RS03365 at 748.875 kb on - strand, within RR42_RS03365 at 748.967 kb on - strand, within RR42_RS03365 at 749.038 kb on + strand, within RR42_RS03365 at 749.039 kb on - strand, within RR42_RS03365 at 749.095 kb on + strand, within RR42_RS03365 at 749.129 kb on - strand, within RR42_RS03365 at 749.278 kb on + strand at 749.278 kb on + strand at 749.278 kb on + strand at 749.554 kb on + strand, within RR42_RS03370 at 749.671 kb on - strand, within RR42_RS03370 at 750.040 kb on + strand, within RR42_RS03370 at 750.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Nickel (II) chloride 0.25 mM remove 747,390 + RR42_RS03360 0.47 -0.6 747,390 + RR42_RS03360 0.47 -0.6 747,390 + RR42_RS03360 0.47 -1.7 747,675 + RR42_RS03360 0.64 -0.6 748,467 - RR42_RS03365 0.11 -0.4 748,875 - RR42_RS03365 0.52 -0.1 748,967 - RR42_RS03365 0.61 +1.2 749,038 + RR42_RS03365 0.68 -1.3 749,039 - RR42_RS03365 0.68 +0.2 749,095 + RR42_RS03365 0.74 -2.0 749,129 - RR42_RS03365 0.77 +0.9 749,278 + -0.8 749,278 + -0.6 749,278 + -1.1 749,554 + RR42_RS03370 0.16 -1.7 749,671 - RR42_RS03370 0.28 -0.9 750,040 + RR42_RS03370 0.66 +0.4 750,346 + -0.1
Or see this region's nucleotide sequence