Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2378

Experiment: D-Galacturonic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galacturonic Acid (C)
2,693,036	+		Pf1N1B4_2377	0.50	-1.7
2,693,037	-		Pf1N1B4_2377	0.50	-2.3
2,693,048	+		Pf1N1B4_2377	0.50	-0.7
2,693,048	+		Pf1N1B4_2377	0.50	-1.7
2,693,048	+		Pf1N1B4_2377	0.50	-1.7
2,693,048	+		Pf1N1B4_2377	0.50	-2.3
2,693,048	+		Pf1N1B4_2377	0.50	-2.7
2,693,048	+		Pf1N1B4_2377	0.50	-1.7
2,693,049	-		Pf1N1B4_2377	0.50	-1.3
2,693,192	+		Pf1N1B4_2377	0.61	-0.7
2,693,193	-		Pf1N1B4_2377	0.61	-1.1
2,693,240	+		Pf1N1B4_2377	0.64	+0.3
2,693,240	+		Pf1N1B4_2377	0.64	-1.7
2,693,240	+		Pf1N1B4_2377	0.64	+0.3
2,693,240	+		Pf1N1B4_2377	0.64	-0.7
2,693,241	-		Pf1N1B4_2377	0.64	-0.7
2,693,251	-		Pf1N1B4_2377	0.65	-0.7
2,693,411	+		Pf1N1B4_2377	0.76	-0.7
2,693,411	+		Pf1N1B4_2377	0.76	-2.5
2,693,411	+		Pf1N1B4_2377	0.76	-1.3
2,693,412	-		Pf1N1B4_2377	0.76	-2.5
2,693,412	-		Pf1N1B4_2377	0.76	-0.5
2,693,412	-		Pf1N1B4_2377	0.76	-2.3
2,693,733	+				-0.7
2,693,775	+				+1.1
2,693,775	+				-1.4
2,693,801	+				-0.7
2,693,802	-				-0.2
2,693,845	+				-0.1
2,693,845	+				-0.7
2,693,845	+				+0.5
2,693,845	+				-1.7
2,693,845	+				+0.3
2,693,846	-				+2.6
2,693,846	-				+0.5
2,693,852	+				+0.2
2,693,852	+				+2.3
2,693,852	+				+0.3
2,693,853	-				-0.3
2,693,853	-				-1.7
2,693,853	-				-0.3
2,693,854	+				+0.5
2,693,855	-				+0.9
2,693,855	-				-0.7
2,693,896	-				-0.1
2,693,928	+				+1.3
2,693,929	-				+0.1
2,693,949	+				-0.7
2,693,949	+				+1.9
2,693,950	-				+0.0
2,694,042	+				+0.5
2,694,042	+				+1.3
2,694,042	+				+0.3
2,694,217	+		Pf1N1B4_2378	0.14	+1.7
2,694,217	+		Pf1N1B4_2378	0.14	-0.7
2,694,217	+		Pf1N1B4_2378	0.14	+1.3
2,694,218	-		Pf1N1B4_2378	0.14	+0.1
2,694,218	-		Pf1N1B4_2378	0.14	-2.3
2,694,218	-				+1.7
2,694,218	-		Pf1N1B4_2378	0.14	+0.9
2,694,218	-		Pf1N1B4_2378	0.14	+0.7
2,694,218	-		Pf1N1B4_2378	0.14	+0.3
2,694,277	+		Pf1N1B4_2378	0.17	+1.0
2,694,278	-		Pf1N1B4_2378	0.17	-1.3
2,694,278	-		Pf1N1B4_2378	0.17	+0.6
2,694,295	+		Pf1N1B4_2378	0.18	-0.1
2,694,296	-		Pf1N1B4_2378	0.18	-1.1
2,694,296	-		Pf1N1B4_2378	0.18	+0.9
2,694,296	-		Pf1N1B4_2378	0.18	+1.2
2,694,296	-		Pf1N1B4_2378	0.18	-0.7
2,694,296	-		Pf1N1B4_2378	0.18	+0.7
2,694,296	-		Pf1N1B4_2378	0.18	-1.3
2,694,355	+		Pf1N1B4_2378	0.22	-0.3
2,694,553	+		Pf1N1B4_2378	0.33	+1.1
2,694,553	+		Pf1N1B4_2378	0.33	+0.3
2,694,553	+		Pf1N1B4_2378	0.33	-1.7
2,694,553	+		Pf1N1B4_2378	0.33	+1.1
2,694,554	-		Pf1N1B4_2378	0.33	-0.1
2,694,554	-		Pf1N1B4_2378	0.33	+0.3
2,694,554	-		Pf1N1B4_2378	0.33	+0.9
2,694,577	+		Pf1N1B4_2378	0.34	-0.3
2,694,699	+		Pf1N1B4_2378	0.41	+0.3
2,694,745	+		Pf1N1B4_2378	0.44	-1.7
2,694,757	+		Pf1N1B4_2378	0.44	+1.3
2,694,757	+		Pf1N1B4_2378	0.44	-0.2
2,694,758	-		Pf1N1B4_2378	0.44	-0.7
2,694,758	-		Pf1N1B4_2378	0.44	+0.9
2,694,758	-		Pf1N1B4_2378	0.44	+0.3
2,694,758	-		Pf1N1B4_2378	0.44	-0.1
2,694,758	-		Pf1N1B4_2378	0.44	-0.8
2,694,853	+		Pf1N1B4_2378	0.50	+0.3
2,694,854	-		Pf1N1B4_2378	0.50	-0.1
2,694,854	-		Pf1N1B4_2378	0.50	-2.0
2,694,931	+		Pf1N1B4_2378	0.54	-1.5
2,694,931	+		Pf1N1B4_2378	0.54	-1.3
2,694,931	+		Pf1N1B4_2378	0.54	+0.0
2,694,931	+				+0.3
2,694,931	+		Pf1N1B4_2378	0.54	+1.3
2,694,931	+		Pf1N1B4_2378	0.54	-1.3
2,694,931	+		Pf1N1B4_2378	0.54	-1.7
2,694,931	+		Pf1N1B4_2378	0.54	+0.3
2,694,932	-		Pf1N1B4_2378	0.54	-0.3
2,694,932	-		Pf1N1B4_2378	0.54	-0.0
2,694,932	-		Pf1N1B4_2378	0.54	-0.2
2,694,932	-		Pf1N1B4_2378	0.54	+0.9
2,695,087	+		Pf1N1B4_2378	0.63	-0.7
2,695,088	-		Pf1N1B4_2378	0.63	-1.9
2,695,133	-		Pf1N1B4_2378	0.66	-0.2
2,695,195	+		Pf1N1B4_2378	0.69	-1.5
2,695,195	+		Pf1N1B4_2378	0.69	+1.9
2,695,195	+		Pf1N1B4_2378	0.69	-0.7
2,695,196	-		Pf1N1B4_2378	0.69	-1.3
2,695,196	-		Pf1N1B4_2378	0.69	-0.0
2,695,196	-		Pf1N1B4_2378	0.69	-0.9
2,695,229	+		Pf1N1B4_2378	0.71	+0.7
2,695,229	+		Pf1N1B4_2378	0.71	+1.3
2,695,261	+		Pf1N1B4_2378	0.73	+1.3
2,695,316	+		Pf1N1B4_2378	0.76	+1.7
2,695,317	-		Pf1N1B4_2378	0.76	+1.9
2,695,317	-		Pf1N1B4_2378	0.76	-1.3
2,695,317	-		Pf1N1B4_2378	0.76	-0.4
2,695,509	-		Pf1N1B4_2378	0.87	-0.9
2,695,741	+				-1.3
2,695,741	+				+1.5
2,695,742	-				+0.3
2,695,742	-				+1.1
2,695,788	+				-1.0
2,695,789	-				+0.9
2,695,800	-				-1.7
2,695,833	-				+0.3
2,695,833	-				-0.7
2,695,844	-				-0.7
2,695,875	+				+0.0
2,695,875	+				+0.9
2,695,875	+				-1.1
2,695,875	+				-0.5
2,695,875	+				+2.3
2,695,875	+				-1.0
2,695,886	-				-0.5
2,695,886	-				+0.1
2,695,886	-				+1.1
2,695,908	+				-1.3
2,696,005	-		Pf1N1B4_2379	0.19	-0.2
2,696,028	-		Pf1N1B4_2379	0.22	+0.3
2,696,040	+		Pf1N1B4_2379	0.23	-0.9
2,696,040	+		Pf1N1B4_2379	0.23	+0.9
2,696,041	-		Pf1N1B4_2379	0.23	-1.0
2,696,077	+		Pf1N1B4_2379	0.27	+1.6
2,696,077	+		Pf1N1B4_2379	0.27	+0.3
2,696,077	+		Pf1N1B4_2379	0.27	+0.0
2,696,078	-		Pf1N1B4_2379	0.27	+0.3
2,696,078	-		Pf1N1B4_2379	0.27	-0.4
2,696,078	-		Pf1N1B4_2379	0.27	-1.3
2,696,078	-		Pf1N1B4_2379	0.27	-0.7
2,696,087	+		Pf1N1B4_2379	0.28	+0.3
2,696,119	+		Pf1N1B4_2379	0.32	+0.3
2,696,120	-		Pf1N1B4_2379	0.32	-0.7
2,696,120	-		Pf1N1B4_2379	0.32	+0.8
2,696,120	-		Pf1N1B4_2379	0.32	-0.9
2,696,121	+		Pf1N1B4_2379	0.32	+0.6
2,696,121	+		Pf1N1B4_2379	0.32	-0.1
2,696,121	+		Pf1N1B4_2379	0.32	+1.1
2,696,121	+				+1.3
2,696,121	+		Pf1N1B4_2379	0.32	-0.3
2,696,122	-		Pf1N1B4_2379	0.32	+1.1
2,696,122	-		Pf1N1B4_2379	0.32	+0.0
2,696,122	-		Pf1N1B4_2379	0.32	+0.9
2,696,122	-		Pf1N1B4_2379	0.32	+0.9
2,696,122	-		Pf1N1B4_2379	0.32	+1.3
2,696,122	-		Pf1N1B4_2379	0.32	+0.3
2,696,122	-		Pf1N1B4_2379	0.32	-0.7
2,696,122	-		Pf1N1B4_2379	0.32	-0.4
2,696,122	-		Pf1N1B4_2379	0.32	-0.1
2,696,149	+		Pf1N1B4_2379	0.35	+0.7
2,696,163	+		Pf1N1B4_2379	0.36	-0.7
2,696,163	+		Pf1N1B4_2379	0.36	+0.6
2,696,219	+		Pf1N1B4_2379	0.42	-0.7
2,696,265	+		Pf1N1B4_2379	0.47	+0.9
2,696,265	+		Pf1N1B4_2379	0.47	+0.7
2,696,266	-		Pf1N1B4_2379	0.47	+0.8
2,696,300	+		Pf1N1B4_2379	0.51	+0.0
2,696,300	+		Pf1N1B4_2379	0.51	-0.7
2,696,300	+		Pf1N1B4_2379	0.51	+0.0
2,696,301	-		Pf1N1B4_2379	0.51	+0.3
2,696,340	+		Pf1N1B4_2379	0.55	+1.0
2,696,340	+		Pf1N1B4_2379	0.55	+0.3
2,696,341	-		Pf1N1B4_2379	0.55	+0.3
2,696,341	-		Pf1N1B4_2379	0.55	+0.8
2,696,375	-		Pf1N1B4_2379	0.59	-1.3
2,696,394	+		Pf1N1B4_2379	0.61	+1.0
2,696,394	+		Pf1N1B4_2379	0.61	-0.6
2,696,394	+		Pf1N1B4_2379	0.61	+0.0
2,696,394	+		Pf1N1B4_2379	0.61	+0.5
2,696,394	+		Pf1N1B4_2379	0.61	+0.7
2,696,394	+		Pf1N1B4_2379	0.61	-1.7
2,696,394	+		Pf1N1B4_2379	0.61	+0.1
2,696,394	+		Pf1N1B4_2379	0.61	+1.3
2,696,395	-		Pf1N1B4_2379	0.61	+1.9
2,696,395	-		Pf1N1B4_2379	0.61	+0.1
2,696,464	+		Pf1N1B4_2379	0.69	+0.5
2,696,464	+		Pf1N1B4_2379	0.69	+0.9
2,696,465	-		Pf1N1B4_2379	0.69	+0.3
2,696,465	-		Pf1N1B4_2379	0.69	+2.3
2,696,465	-		Pf1N1B4_2379	0.69	-0.3
2,696,466	+		Pf1N1B4_2379	0.69	-0.7
2,696,466	+		Pf1N1B4_2379	0.69	-0.7
2,696,466	+		Pf1N1B4_2379	0.69	+0.8
2,696,476	+		Pf1N1B4_2379	0.70	-0.1
2,696,506	-		Pf1N1B4_2379	0.73	-0.0
2,696,506	-		Pf1N1B4_2379	0.73	-1.7
2,696,506	-		Pf1N1B4_2379	0.73	-0.3
2,696,517	+		Pf1N1B4_2379	0.74	+0.5
2,696,517	+		Pf1N1B4_2379	0.74	+2.2
2,696,517	+		Pf1N1B4_2379	0.74	-0.2
2,696,517	+		Pf1N1B4_2379	0.74	+0.5
2,696,517	+		Pf1N1B4_2379	0.74	+0.3
2,696,517	+		Pf1N1B4_2379	0.74	+0.6
2,696,517	+		Pf1N1B4_2379	0.74	+0.1
2,696,517	+		Pf1N1B4_2379	0.74	+0.4
2,696,517	+		Pf1N1B4_2379	0.74	-1.3
2,696,517	+		Pf1N1B4_2379	0.74	-0.2
2,696,517	+		Pf1N1B4_2379	0.74	+0.3
2,696,517	+		Pf1N1B4_2379	0.74	-0.1
2,696,517	+		Pf1N1B4_2379	0.74	-0.3
2,696,517	+		Pf1N1B4_2379	0.74	-1.5
2,696,518	-		Pf1N1B4_2379	0.74	+0.0
2,696,518	-		Pf1N1B4_2379	0.74	-0.2
2,696,518	-		Pf1N1B4_2379	0.74	+0.6
2,696,518	-		Pf1N1B4_2379	0.74	-0.3
2,696,518	-		Pf1N1B4_2379	0.74	+1.1
2,696,631	+		Pf1N1B4_2379	0.87	-0.3
2,696,631	+		Pf1N1B4_2379	0.87	+1.4
2,696,631	+		Pf1N1B4_2379	0.87	-0.0
2,696,631	+		Pf1N1B4_2379	0.87	+0.1
2,696,711	+				+0.5