Experiment: LB, pH7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1993 and Ac3H11_1994 overlap by 4 nucleotides Ac3H11_1994 and Ac3H11_1995 are separated by 119 nucleotides Ac3H11_1995 and Ac3H11_1996 are separated by 31 nucleotides
Ac3H11_1993 - Diaminopimelate epimerase (EC 5.1.1.7), at 209,182 to 210,042
_1993
Ac3H11_1994 - Protein of unknown function DUF484, at 210,039 to 210,731
_1994
Ac3H11_1995 - Tyrosine recombinase XerC, at 210,851 to 211,834
_1995
Ac3H11_1996 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 211,866 to 213,467
_1996
Position (kb) 210
211
212 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 210.038 kb on + strand at 210.038 kb on + strand at 210.038 kb on + strand at 210.038 kb on + strand at 210.842 kb on + strand at 210.842 kb on + strand at 210.902 kb on + strand at 210.957 kb on - strand, within Ac3H11_1995 at 210.957 kb on - strand, within Ac3H11_1995 at 211.304 kb on + strand, within Ac3H11_1995 at 211.304 kb on + strand, within Ac3H11_1995 at 211.304 kb on + strand, within Ac3H11_1995 at 211.305 kb on - strand, within Ac3H11_1995 at 211.305 kb on - strand, within Ac3H11_1995 at 211.751 kb on + strand at 211.751 kb on + strand at 211.752 kb on - strand at 211.753 kb on + strand at 211.754 kb on - strand at 211.788 kb on - strand at 211.832 kb on + strand at 211.832 kb on + strand at 211.832 kb on + strand at 211.833 kb on - strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.948 kb on + strand at 211.949 kb on - strand at 211.949 kb on - strand at 211.949 kb on - strand at 212.235 kb on + strand, within Ac3H11_1996 at 212.235 kb on + strand, within Ac3H11_1996 at 212.235 kb on + strand, within Ac3H11_1996
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH7 remove 210,038 + -0.6 210,038 + -0.7 210,038 + -0.4 210,038 + +0.3 210,842 + +0.7 210,842 + +0.1 210,902 + +0.6 210,957 - Ac3H11_1995 0.11 -1.5 210,957 - Ac3H11_1995 0.11 -2.8 211,304 + Ac3H11_1995 0.46 -2.4 211,304 + Ac3H11_1995 0.46 -0.7 211,304 + Ac3H11_1995 0.46 -1.4 211,305 - Ac3H11_1995 0.46 -0.1 211,305 - Ac3H11_1995 0.46 +0.5 211,751 + -2.4 211,751 + +0.1 211,752 - +1.9 211,753 + -0.1 211,754 - +1.7 211,788 - +1.5 211,832 + +0.6 211,832 + +0.0 211,832 + +0.3 211,833 - +0.4 211,948 + -1.6 211,948 + +0.2 211,948 + -0.7 211,948 + -0.3 211,948 + +0.5 211,948 + -0.2 211,948 + +0.1 211,948 + -0.4 211,948 + -0.1 211,948 + -0.3 211,948 + +0.2 211,948 + -1.0 211,948 + -0.8 211,948 + -0.7 211,948 + -0.3 211,949 - +0.1 211,949 - +1.0 211,949 - +0.9 212,235 + Ac3H11_1996 0.23 -0.3 212,235 + Ac3H11_1996 0.23 -0.7 212,235 + Ac3H11_1996 0.23 +1.1
Or see this region's nucleotide sequence