Experiment: LB, pH7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1903 and Ac3H11_1904 are separated by 305 nucleotides Ac3H11_1904 and Ac3H11_1905 are separated by 76 nucleotides Ac3H11_1905 and Ac3H11_1906 are separated by 203 nucleotides
Ac3H11_1903 - glycosyl transferase, family 2, at 110,207 to 111,199
_1903
Ac3H11_1904 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89), at 111,505 to 111,846
_1904
Ac3H11_1905 - Lytic transglycosylase, catalytic, at 111,923 to 112,564
_1905
Ac3H11_1906 - Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-), at 112,768 to 113,871
_1906
Position (kb)
111
112 Strain fitness (log2 ratio)
-1
0
1 at 111.798 kb on + strand, within Ac3H11_1904 at 111.798 kb on + strand, within Ac3H11_1904 at 111.862 kb on + strand at 111.862 kb on + strand at 111.863 kb on - strand at 111.872 kb on + strand at 111.872 kb on + strand at 111.872 kb on + strand at 111.872 kb on + strand at 111.872 kb on + strand at 111.918 kb on + strand at 112.209 kb on + strand, within Ac3H11_1905 at 112.495 kb on - strand, within Ac3H11_1905 at 112.520 kb on + strand at 112.550 kb on - strand at 112.563 kb on - strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.573 kb on + strand at 112.574 kb on - strand at 112.574 kb on - strand at 112.574 kb on - strand at 112.574 kb on - strand at 112.574 kb on - strand at 112.574 kb on - strand at 112.574 kb on - strand at 112.574 kb on - strand at 112.647 kb on + strand at 112.647 kb on + strand at 112.647 kb on + strand at 112.647 kb on + strand at 112.647 kb on + strand at 112.648 kb on - strand at 112.648 kb on - strand at 112.648 kb on - strand at 112.648 kb on - strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.671 kb on + strand at 112.672 kb on - strand at 112.672 kb on - strand at 112.672 kb on - strand at 112.672 kb on - strand at 112.672 kb on - strand at 112.672 kb on - strand at 112.707 kb on + strand at 112.707 kb on + strand at 112.707 kb on + strand at 112.707 kb on + strand at 112.707 kb on + strand at 112.708 kb on - strand at 112.708 kb on - strand at 112.708 kb on - strand at 112.708 kb on - strand at 112.708 kb on - strand at 112.708 kb on - strand at 112.708 kb on - strand at 112.708 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH7 remove 111,798 + Ac3H11_1904 0.86 -1.3 111,798 + Ac3H11_1904 0.86 -1.6 111,862 + +0.2 111,862 + +0.1 111,863 - -1.0 111,872 + -0.4 111,872 + -0.2 111,872 + +0.3 111,872 + -0.3 111,872 + -0.2 111,918 + -0.1 112,209 + Ac3H11_1905 0.45 -1.5 112,495 - Ac3H11_1905 0.89 +0.5 112,520 + +1.2 112,550 - +0.2 112,563 - -0.1 112,573 + -0.2 112,573 + -0.2 112,573 + +0.0 112,573 + +0.1 112,573 + -0.6 112,573 + -0.1 112,573 + -0.7 112,573 + -0.0 112,573 + -0.2 112,573 + +0.4 112,574 - -0.3 112,574 - +0.1 112,574 - -0.2 112,574 - +0.6 112,574 - -0.0 112,574 - +0.4 112,574 - +1.4 112,574 - -1.4 112,647 + +0.3 112,647 + -0.1 112,647 + +0.0 112,647 + -0.3 112,647 + +0.6 112,648 - -0.5 112,648 - -0.1 112,648 - +0.4 112,648 - +0.8 112,671 + -0.7 112,671 + +0.2 112,671 + +0.5 112,671 + -1.4 112,671 + -0.0 112,671 + -0.1 112,671 + -0.3 112,671 + +1.2 112,671 + -0.4 112,671 + -0.3 112,671 + +0.7 112,672 - -0.0 112,672 - -0.6 112,672 - +0.0 112,672 - +0.7 112,672 - +0.2 112,672 - -0.4 112,707 + +0.9 112,707 + -0.5 112,707 + -0.3 112,707 + -0.9 112,707 + +0.7 112,708 - -1.6 112,708 - -0.7 112,708 - -0.1 112,708 - -0.0 112,708 - -0.5 112,708 - +0.2 112,708 - +0.4 112,708 - +0.6
Or see this region's nucleotide sequence