Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03610 and AO353_03615 are separated by 666 nucleotides AO353_03615 and AO353_03620 are separated by 92 nucleotides AO353_03620 and AO353_03625 are separated by 3 nucleotides
AO353_03610: AO353_03610 - arylsulfate sulfotransferase, at 770,538 to 770,873
_03610
AO353_03615: AO353_03615 - cold-shock protein, at 771,540 to 772,142
_03615
AO353_03620: AO353_03620 - hypothetical protein, at 772,235 to 772,441
_03620
AO353_03625: AO353_03625 - histidine triad (HIT) protein, at 772,445 to 772,870
_03625
Position (kb) 771
772
773 Strain fitness (log2 ratio) -2
-1
0
1
2 at 770.550 kb on - strand at 770.550 kb on - strand at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.575 kb on - strand, within AO353_03610 at 770.575 kb on - strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.643 kb on - strand, within AO353_03610 at 770.643 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.885 kb on + strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.907 kb on + strand at 770.907 kb on + strand at 770.907 kb on + strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.944 kb on + strand at 770.944 kb on + strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.960 kb on + strand at 770.960 kb on + strand at 770.961 kb on - strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.966 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.995 kb on - strand at 770.995 kb on - strand at 770.995 kb on - strand at 771.025 kb on + strand at 771.026 kb on - strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.046 kb on + strand at 771.047 kb on - strand at 771.049 kb on - strand at 771.049 kb on - strand at 771.093 kb on + strand at 771.094 kb on - strand at 771.207 kb on + strand at 771.207 kb on + strand at 771.207 kb on + strand at 771.208 kb on - strand at 771.208 kb on - strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.210 kb on - strand at 771.210 kb on - strand at 771.210 kb on - strand at 771.288 kb on - strand at 771.288 kb on - strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.398 kb on - strand at 771.398 kb on - strand at 771.438 kb on + strand at 771.438 kb on + strand at 771.438 kb on + strand at 771.453 kb on + strand at 771.522 kb on + strand at 771.599 kb on + strand at 771.600 kb on - strand at 771.600 kb on - strand at 771.625 kb on - strand, within AO353_03615 at 771.648 kb on + strand, within AO353_03615 at 771.649 kb on - strand, within AO353_03615 at 771.882 kb on + strand, within AO353_03615 at 771.883 kb on - strand, within AO353_03615 at 772.004 kb on + strand, within AO353_03615 at 772.145 kb on + strand at 772.145 kb on + strand at 772.145 kb on + strand at 772.145 kb on + strand at 772.145 kb on + strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.164 kb on - strand at 772.239 kb on + strand at 772.240 kb on - strand at 772.502 kb on + strand, within AO353_03625 at 772.502 kb on + strand, within AO353_03625 at 772.503 kb on - strand, within AO353_03625 at 772.524 kb on + strand, within AO353_03625 at 772.524 kb on + strand, within AO353_03625 at 772.524 kb on + strand, within AO353_03625 at 772.525 kb on - strand, within AO353_03625 at 772.525 kb on - strand, within AO353_03625 at 772.525 kb on - strand, within AO353_03625 at 772.525 kb on - strand, within AO353_03625 at 772.582 kb on + strand, within AO353_03625 at 772.582 kb on + strand, within AO353_03625 at 772.583 kb on - strand, within AO353_03625 at 772.583 kb on - strand, within AO353_03625 at 772.583 kb on - strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.745 kb on - strand, within AO353_03625 at 772.780 kb on - strand, within AO353_03625 at 772.780 kb on - strand, within AO353_03625 at 772.811 kb on + strand, within AO353_03625 at 772.812 kb on - strand, within AO353_03625 at 772.859 kb on + strand at 772.859 kb on + strand at 772.860 kb on - strand at 772.861 kb on - strand at 772.926 kb on - strand at 772.935 kb on + strand at 772.936 kb on - strand at 772.936 kb on - strand at 772.936 kb on - strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.939 kb on + strand at 772.939 kb on + strand at 772.939 kb on + strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.990 kb on + strand at 773.019 kb on - strand at 773.119 kb on + strand at 773.119 kb on + strand at 773.119 kb on + strand at 773.119 kb on + strand at 773.119 kb on + strand at 773.120 kb on - strand at 773.120 kb on - strand at 773.120 kb on - strand at 773.120 kb on - strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.132 kb on - strand at 773.132 kb on - strand at 773.132 kb on - strand at 773.132 kb on - strand at 773.132 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 770,550 - +1.6 770,550 - -1.0 770,574 + AO353_03610 0.11 -0.7 770,574 + AO353_03610 0.11 -0.6 770,574 + AO353_03610 0.11 +0.1 770,574 + AO353_03610 0.11 -1.0 770,575 - AO353_03610 0.11 -0.7 770,575 - AO353_03610 0.11 +0.6 770,642 + AO353_03610 0.31 -2.5 770,642 + AO353_03610 0.31 -2.5 770,642 + AO353_03610 0.31 +0.3 770,643 - AO353_03610 0.31 -1.8 770,643 - AO353_03610 0.31 +1.1 770,651 - AO353_03610 0.34 -1.6 770,651 - AO353_03610 0.34 +0.6 770,651 - AO353_03610 0.34 -1.9 770,651 - AO353_03610 0.34 -0.8 770,713 + AO353_03610 0.52 -0.7 770,713 + AO353_03610 0.52 -0.9 770,713 + AO353_03610 0.52 +1.3 770,714 - AO353_03610 0.52 +1.7 770,714 - AO353_03610 0.52 -0.2 770,714 - AO353_03610 0.52 +1.4 770,885 + -0.6 770,886 - -0.5 770,886 - -0.3 770,886 - -0.3 770,886 - -0.6 770,886 - -0.2 770,886 - +0.2 770,907 + -0.0 770,907 + -0.1 770,907 + -0.9 770,908 - -0.3 770,908 - -1.1 770,908 - -0.7 770,908 - -0.5 770,908 - -0.2 770,908 - +2.7 770,908 - -1.6 770,944 + +0.7 770,944 + +1.7 770,945 - -1.5 770,945 - -0.2 770,945 - -0.5 770,945 - -0.5 770,945 - -1.8 770,945 - -1.6 770,945 - +0.9 770,960 + +0.0 770,960 + -1.6 770,961 - +0.5 770,964 + +0.7 770,964 + -1.3 770,964 + +1.1 770,964 + -0.8 770,964 + -0.2 770,964 + -1.1 770,964 + +1.2 770,964 + -0.3 770,964 + +0.8 770,965 - +0.7 770,965 - -1.1 770,965 - -1.2 770,965 - -0.5 770,965 - -1.0 770,965 - -0.9 770,965 - -2.0 770,965 - -0.1 770,965 - +0.7 770,966 + +0.8 770,980 + -0.2 770,980 + -0.3 770,980 + -0.1 770,980 + +1.0 770,980 + +0.9 770,980 + +0.2 770,981 - -0.1 770,981 - -1.6 770,981 - +1.0 770,981 - -0.3 770,981 - -0.5 770,981 - -1.3 770,994 + +0.8 770,994 + -0.7 770,994 + -1.5 770,994 + +0.1 770,995 - +2.4 770,995 - -0.0 770,995 - +1.3 771,025 + +0.1 771,026 - +0.7 771,036 + +0.7 771,036 + -0.5 771,036 + +0.1 771,036 + +0.3 771,036 + +0.9 771,036 + -1.1 771,036 + +1.5 771,037 - -0.6 771,037 - -0.3 771,037 - -0.9 771,037 - +0.2 771,037 - -0.3 771,037 - -0.1 771,037 - +1.4 771,037 - +0.4 771,037 - -1.2 771,037 - -1.6 771,037 - -0.3 771,037 - +0.3 771,037 - +0.0 771,046 + -1.1 771,047 - +1.2 771,049 - +0.0 771,049 - +1.7 771,093 + -0.4 771,094 - -1.5 771,207 + -1.4 771,207 + +0.6 771,207 + +0.9 771,208 - +0.5 771,208 - +0.7 771,209 + +0.1 771,209 + -0.3 771,209 + +0.0 771,209 + -0.3 771,209 + +1.2 771,209 + +1.4 771,210 - +1.5 771,210 - -1.9 771,210 - +0.5 771,288 - +0.3 771,288 - -1.9 771,397 + -0.6 771,397 + -0.6 771,397 + -0.6 771,397 + +0.1 771,398 - -1.6 771,398 - -1.3 771,438 + -0.6 771,438 + -0.3 771,438 + -0.0 771,453 + -0.3 771,522 + +0.8 771,599 + -0.5 771,600 - -0.7 771,600 - -1.6 771,625 - AO353_03615 0.14 -0.3 771,648 + AO353_03615 0.18 -0.5 771,649 - AO353_03615 0.18 -0.9 771,882 + AO353_03615 0.57 -0.4 771,883 - AO353_03615 0.57 -0.7 772,004 + AO353_03615 0.77 -1.6 772,145 + +0.7 772,145 + -0.3 772,145 + +0.4 772,145 + +0.7 772,145 + -1.0 772,146 - -0.0 772,146 - +0.4 772,146 - +0.3 772,146 - -0.9 772,146 - -0.9 772,146 - +0.2 772,146 - -2.1 772,146 - -1.9 772,164 - +0.4 772,239 + +0.7 772,240 - +0.2 772,502 + AO353_03625 0.13 +1.0 772,502 + AO353_03625 0.13 -0.5 772,503 - AO353_03625 0.14 +1.3 772,524 + AO353_03625 0.19 -0.3 772,524 + AO353_03625 0.19 +1.3 772,524 + AO353_03625 0.19 +1.0 772,525 - AO353_03625 0.19 -0.5 772,525 - AO353_03625 0.19 +1.3 772,525 - AO353_03625 0.19 -1.0 772,525 - AO353_03625 0.19 -0.4 772,582 + AO353_03625 0.32 +0.1 772,582 + AO353_03625 0.32 +0.1 772,583 - AO353_03625 0.32 +1.2 772,583 - AO353_03625 0.32 -0.3 772,583 - AO353_03625 0.32 +0.1 772,604 + AO353_03625 0.37 -0.3 772,604 + AO353_03625 0.37 -1.4 772,604 + AO353_03625 0.37 +0.5 772,604 + AO353_03625 0.37 +2.3 772,604 + AO353_03625 0.37 -0.3 772,605 - AO353_03625 0.38 -0.4 772,605 - AO353_03625 0.38 -0.6 772,605 - AO353_03625 0.38 +0.7 772,605 - AO353_03625 0.38 +0.7 772,605 - AO353_03625 0.38 -0.3 772,605 - AO353_03625 0.38 -0.0 772,605 - AO353_03625 0.38 +0.7 772,745 - AO353_03625 0.70 +1.4 772,780 - AO353_03625 0.79 +0.7 772,780 - AO353_03625 0.79 -0.3 772,811 + AO353_03625 0.86 -0.6 772,812 - AO353_03625 0.86 -0.0 772,859 + -1.7 772,859 + -1.3 772,860 - +1.0 772,861 - -1.6 772,926 - -1.3 772,935 + +1.1 772,936 - +0.3 772,936 - -0.9 772,936 - -1.9 772,937 + +0.9 772,937 + +1.7 772,937 + -0.3 772,937 + +0.2 772,937 + +0.1 772,937 + +1.0 772,937 + -1.1 772,937 + -2.6 772,937 + +0.5 772,937 + +0.0 772,937 + +0.1 772,937 + +0.7 772,938 - +0.4 772,938 - +0.7 772,938 - +0.7 772,938 - +0.6 772,938 - -0.0 772,938 - +0.4 772,938 - -0.6 772,938 - -0.6 772,938 - +0.7 772,938 - -0.9 772,938 - -0.3 772,938 - +1.3 772,938 - -0.5 772,939 + +0.2 772,939 + -0.6 772,939 + +1.3 772,940 - -1.9 772,940 - +1.7 772,940 - -1.4 772,940 - +0.4 772,940 - -0.1 772,940 - +0.7 772,940 - +0.6 772,940 - -0.9 772,940 - -0.3 772,940 - +1.7 772,990 + +0.9 773,019 - +0.4 773,119 + +0.7 773,119 + +0.4 773,119 + -2.3 773,119 + -0.4 773,119 + +0.4 773,120 - +0.7 773,120 - +0.2 773,120 - +1.6 773,120 - +0.7 773,131 + -1.3 773,131 + -0.9 773,131 + -1.0 773,131 + +0.9 773,131 + -0.2 773,131 + +0.4 773,131 + +0.1 773,132 - +0.1 773,132 - +2.4 773,132 - -2.1 773,132 - -0.8 773,132 - -0.9
Or see this region's nucleotide sequence