Experiment: Bacitracin 0.0009765625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ffh and Synpcc7942_2473 are separated by 179 nucleotides Synpcc7942_2473 and Synpcc7942_2474 are separated by 55 nucleotides Synpcc7942_2474 and argH are separated by 83 nucleotides
Synpcc7942_2472: ffh - signal recognition particle-docking protein FtsY, at 2,553,267 to 2,554,823
ffh
Synpcc7942_2473: Synpcc7942_2473 - serine phosphatase, at 2,555,003 to 2,556,391
_2473
Synpcc7942_2474: Synpcc7942_2474 - hypothetical protein, at 2,556,447 to 2,556,608
_2474
Synpcc7942_2475: argH - argininosuccinate lyase, at 2,556,692 to 2,558,116
argH
Position (kb)
2555
2556
2557 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2554.857 kb on - strand at 2554.858 kb on + strand at 2554.863 kb on + strand at 2554.868 kb on + strand at 2554.880 kb on + strand at 2554.902 kb on - strand at 2554.946 kb on + strand at 2554.963 kb on + strand at 2555.130 kb on - strand at 2556.407 kb on - strand at 2556.418 kb on + strand at 2556.418 kb on + strand at 2556.426 kb on - strand at 2556.426 kb on - strand at 2556.426 kb on - strand at 2556.477 kb on - strand, within Synpcc7942_2474 at 2556.511 kb on + strand, within Synpcc7942_2474 at 2556.532 kb on + strand, within Synpcc7942_2474 at 2556.537 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.542 kb on + strand, within Synpcc7942_2474 at 2556.550 kb on - strand, within Synpcc7942_2474 at 2556.550 kb on - strand, within Synpcc7942_2474 at 2556.550 kb on - strand, within Synpcc7942_2474 at 2556.550 kb on - strand, within Synpcc7942_2474 at 2556.550 kb on - strand, within Synpcc7942_2474 at 2556.563 kb on - strand, within Synpcc7942_2474 at 2556.565 kb on - strand, within Synpcc7942_2474 at 2556.597 kb on + strand at 2556.615 kb on - strand at 2556.641 kb on - strand at 2556.658 kb on + strand at 2556.660 kb on + strand at 2556.671 kb on - strand at 2556.672 kb on + strand at 2556.672 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.0009765625 mg/ml remove 2,554,857 - -1.1 2,554,858 + +1.5 2,554,863 + -1.1 2,554,868 + -2.0 2,554,880 + +1.5 2,554,902 - +2.4 2,554,946 + -0.4 2,554,963 + -2.1 2,555,130 - -4.1 2,556,407 - +1.0 2,556,418 + +0.5 2,556,418 + -0.1 2,556,426 - -0.6 2,556,426 - +0.3 2,556,426 - +0.6 2,556,477 - Synpcc7942_2474 0.19 +1.1 2,556,511 + Synpcc7942_2474 0.40 +0.9 2,556,532 + Synpcc7942_2474 0.52 -2.1 2,556,537 + Synpcc7942_2474 0.56 +0.1 2,556,542 + Synpcc7942_2474 0.59 +0.9 2,556,542 + Synpcc7942_2474 0.59 +0.9 2,556,542 + Synpcc7942_2474 0.59 +0.6 2,556,542 + Synpcc7942_2474 0.59 +0.4 2,556,542 + Synpcc7942_2474 0.59 -0.6 2,556,542 + Synpcc7942_2474 0.59 +1.3 2,556,542 + Synpcc7942_2474 0.59 +2.7 2,556,542 + Synpcc7942_2474 0.59 -0.1 2,556,542 + Synpcc7942_2474 0.59 -1.1 2,556,550 - Synpcc7942_2474 0.64 +1.4 2,556,550 - Synpcc7942_2474 0.64 +0.3 2,556,550 - Synpcc7942_2474 0.64 +1.6 2,556,550 - Synpcc7942_2474 0.64 +1.2 2,556,550 - Synpcc7942_2474 0.64 +0.2 2,556,563 - Synpcc7942_2474 0.72 +0.3 2,556,565 - Synpcc7942_2474 0.73 +0.5 2,556,597 + +0.0 2,556,615 - -0.5 2,556,641 - +0.9 2,556,658 + +0.7 2,556,660 + +1.2 2,556,671 - -1.7 2,556,672 + -0.4 2,556,672 + +0.4
Or see this region's nucleotide sequence