Experiment: Bacitracin 0.0009765625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0482 and Synpcc7942_0483 are separated by 2 nucleotides Synpcc7942_0483 and Synpcc7942_0484 are separated by 212 nucleotides Synpcc7942_0484 and gpmB are separated by 100 nucleotides
Synpcc7942_0482: Synpcc7942_0482 - Peptidoglycan glycosyltransferase, at 467,004 to 468,773
_0482
Synpcc7942_0483: Synpcc7942_0483 - hypothetical protein, at 468,776 to 469,219
_0483
Synpcc7942_0484: Synpcc7942_0484 - hypothetical protein, at 469,432 to 470,874
_0484
Synpcc7942_0485: gpmB - phosphoglycerate mutase, at 470,975 to 472,312
gpmB
Position (kb) 469
470
471 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 468.704 kb on + strand at 468.748 kb on + strand at 468.756 kb on - strand at 469.134 kb on + strand, within Synpcc7942_0483 at 469.161 kb on + strand, within Synpcc7942_0483 at 469.237 kb on + strand at 469.346 kb on + strand at 469.419 kb on + strand at 469.419 kb on + strand at 469.424 kb on + strand at 469.424 kb on + strand at 469.424 kb on + strand at 469.427 kb on - strand at 469.429 kb on + strand at 469.429 kb on + strand at 469.429 kb on + strand at 469.429 kb on + strand at 469.429 kb on + strand at 469.429 kb on + strand at 469.429 kb on + strand at 469.429 kb on + strand at 469.429 kb on + strand at 469.430 kb on + strand at 469.437 kb on - strand at 469.437 kb on - strand at 469.437 kb on - strand at 469.452 kb on - strand at 469.452 kb on - strand at 469.459 kb on + strand at 469.459 kb on + strand at 469.531 kb on - strand at 469.600 kb on + strand, within Synpcc7942_0484 at 469.657 kb on - strand, within Synpcc7942_0484 at 469.721 kb on + strand, within Synpcc7942_0484 at 469.807 kb on + strand, within Synpcc7942_0484 at 469.834 kb on + strand, within Synpcc7942_0484 at 469.883 kb on + strand, within Synpcc7942_0484 at 469.893 kb on + strand, within Synpcc7942_0484 at 470.144 kb on + strand, within Synpcc7942_0484 at 470.167 kb on - strand, within Synpcc7942_0484 at 470.302 kb on - strand, within Synpcc7942_0484 at 470.573 kb on - strand, within Synpcc7942_0484 at 470.599 kb on + strand, within Synpcc7942_0484 at 470.654 kb on + strand, within Synpcc7942_0484 at 470.719 kb on - strand, within Synpcc7942_0484 at 470.764 kb on - strand at 470.780 kb on + strand at 470.836 kb on - strand at 470.853 kb on - strand at 470.860 kb on - strand at 470.860 kb on - strand at 470.860 kb on - strand at 470.871 kb on + strand at 470.906 kb on - strand at 470.945 kb on + strand at 470.947 kb on + strand at 470.947 kb on + strand at 470.947 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.0009765625 mg/ml remove 468,704 + -0.1 468,748 + -0.1 468,756 - +0.2 469,134 + Synpcc7942_0483 0.81 -0.6 469,161 + Synpcc7942_0483 0.87 -0.8 469,237 + -1.7 469,346 + -0.1 469,419 + +0.3 469,419 + +0.1 469,424 + -0.4 469,424 + -1.7 469,424 + +0.9 469,427 - +0.1 469,429 + -2.4 469,429 + +0.2 469,429 + -1.1 469,429 + -0.8 469,429 + -1.1 469,429 + +0.5 469,429 + +0.3 469,429 + -0.1 469,429 + -0.1 469,430 + -1.1 469,437 - +2.2 469,437 - +0.2 469,437 - +0.1 469,452 - -1.1 469,452 - +0.9 469,459 + -3.3 469,459 + +1.5 469,531 - -0.7 469,600 + Synpcc7942_0484 0.12 +4.2 469,657 - Synpcc7942_0484 0.16 -2.5 469,721 + Synpcc7942_0484 0.20 -3.9 469,807 + Synpcc7942_0484 0.26 -2.7 469,834 + Synpcc7942_0484 0.28 -2.7 469,883 + Synpcc7942_0484 0.31 +0.5 469,893 + Synpcc7942_0484 0.32 +0.9 470,144 + Synpcc7942_0484 0.49 -2.2 470,167 - Synpcc7942_0484 0.51 +1.6 470,302 - Synpcc7942_0484 0.60 -2.1 470,573 - Synpcc7942_0484 0.79 -0.1 470,599 + Synpcc7942_0484 0.81 -2.4 470,654 + Synpcc7942_0484 0.85 -0.8 470,719 - Synpcc7942_0484 0.89 -2.7 470,764 - +1.1 470,780 + -0.1 470,836 - -1.7 470,853 - +0.5 470,860 - +0.1 470,860 - +1.8 470,860 - -0.2 470,871 + -0.6 470,906 - -0.1 470,945 + -0.1 470,947 + +3.2 470,947 + +0.7 470,947 + -1.4
Or see this region's nucleotide sequence