Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_3426 and Pf1N1B4_3427 are separated by 969 nucleotides Pf1N1B4_3427 and Pf1N1B4_3428 are separated by 644 nucleotides
Pf1N1B4_3426 - McrBC 5-methylcytosine restriction system component, at 3,816,823 to 3,818,124
_3426
Pf1N1B4_3427 - Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1), at 3,819,094 to 3,820,344
_3427
Pf1N1B4_3428 - putative secreted protein, at 3,820,989 to 3,821,261
_3428
Position (kb)
3819
3820
3821 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3818.183 kb on + strand at 3818.184 kb on - strand at 3818.299 kb on + strand at 3818.299 kb on + strand at 3818.299 kb on + strand at 3818.299 kb on + strand at 3818.299 kb on + strand at 3818.300 kb on - strand at 3818.300 kb on - strand at 3818.300 kb on - strand at 3818.380 kb on + strand at 3818.380 kb on + strand at 3818.380 kb on + strand at 3818.381 kb on - strand at 3818.381 kb on - strand at 3818.381 kb on - strand at 3818.381 kb on - strand at 3818.381 kb on - strand at 3818.429 kb on + strand at 3818.429 kb on + strand at 3818.450 kb on + strand at 3818.450 kb on + strand at 3818.451 kb on - strand at 3818.451 kb on - strand at 3818.451 kb on - strand at 3818.451 kb on - strand at 3818.503 kb on + strand at 3818.503 kb on + strand at 3818.503 kb on + strand at 3818.503 kb on + strand at 3818.503 kb on + strand at 3818.503 kb on + strand at 3818.504 kb on - strand at 3818.504 kb on - strand at 3818.504 kb on - strand at 3818.504 kb on - strand at 3818.561 kb on + strand at 3818.561 kb on + strand at 3818.562 kb on - strand at 3818.562 kb on - strand at 3818.562 kb on - strand at 3818.562 kb on - strand at 3818.581 kb on + strand at 3818.581 kb on + strand at 3818.582 kb on - strand at 3818.621 kb on - strand at 3818.653 kb on + strand at 3818.653 kb on + strand at 3818.654 kb on - strand at 3818.727 kb on + strand at 3818.727 kb on + strand at 3818.727 kb on + strand at 3818.727 kb on + strand at 3818.728 kb on - strand at 3818.728 kb on - strand at 3818.728 kb on - strand at 3818.728 kb on - strand at 3818.728 kb on - strand at 3818.741 kb on + strand at 3818.741 kb on + strand at 3818.745 kb on + strand at 3818.745 kb on + strand at 3818.745 kb on + strand at 3818.745 kb on + strand at 3818.745 kb on + strand at 3818.745 kb on + strand at 3818.746 kb on - strand at 3818.746 kb on - strand at 3818.749 kb on - strand at 3818.773 kb on + strand at 3818.773 kb on + strand at 3818.774 kb on - strand at 3818.774 kb on - strand at 3818.774 kb on - strand at 3818.774 kb on - strand at 3818.774 kb on - strand at 3818.774 kb on - strand at 3818.785 kb on - strand at 3818.814 kb on + strand at 3818.814 kb on + strand at 3818.814 kb on + strand at 3818.814 kb on + strand at 3818.815 kb on - strand at 3818.815 kb on - strand at 3818.815 kb on - strand at 3818.815 kb on - strand at 3818.815 kb on - strand at 3818.872 kb on + strand at 3818.888 kb on + strand at 3818.909 kb on - strand at 3818.909 kb on - strand at 3818.909 kb on - strand at 3818.909 kb on - strand at 3818.909 kb on - strand at 3818.947 kb on + strand at 3818.965 kb on + strand at 3818.995 kb on + strand at 3818.995 kb on + strand at 3819.095 kb on + strand at 3820.460 kb on - strand at 3820.460 kb on - strand at 3820.460 kb on - strand at 3820.460 kb on - strand at 3820.602 kb on - strand at 3820.602 kb on - strand at 3820.604 kb on - strand at 3820.604 kb on - strand at 3820.903 kb on + strand at 3820.903 kb on + strand at 3820.903 kb on + strand at 3820.909 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.948 kb on + strand at 3820.949 kb on - strand at 3820.949 kb on - strand at 3820.949 kb on - strand at 3820.959 kb on + strand at 3820.959 kb on + strand at 3820.959 kb on + strand at 3820.959 kb on + strand at 3820.959 kb on + strand at 3820.959 kb on + strand at 3821.010 kb on + strand at 3821.010 kb on + strand at 3821.010 kb on + strand at 3821.011 kb on - strand at 3821.268 kb on - strand at 3821.268 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 3,818,183 + -0.9 3,818,184 - -0.3 3,818,299 + -1.2 3,818,299 + -0.5 3,818,299 + -1.3 3,818,299 + +0.5 3,818,299 + -0.8 3,818,300 - +0.2 3,818,300 - -0.1 3,818,300 - -1.1 3,818,380 + +0.3 3,818,380 + +0.3 3,818,380 + +0.3 3,818,381 - +1.9 3,818,381 - +0.5 3,818,381 - +0.3 3,818,381 - +0.3 3,818,381 - +0.5 3,818,429 + +1.9 3,818,429 + +0.5 3,818,450 + -1.7 3,818,450 + +0.2 3,818,451 - +1.2 3,818,451 - -0.9 3,818,451 - +1.5 3,818,451 - -0.1 3,818,503 + +0.9 3,818,503 + -0.1 3,818,503 + +0.5 3,818,503 + +1.3 3,818,503 + -0.4 3,818,503 + +2.2 3,818,504 - -1.1 3,818,504 - -0.3 3,818,504 - -1.3 3,818,504 - -0.4 3,818,561 + +0.2 3,818,561 + +1.5 3,818,562 - -0.5 3,818,562 - -0.5 3,818,562 - +0.3 3,818,562 - -1.1 3,818,581 + -1.1 3,818,581 + +0.9 3,818,582 - -0.5 3,818,621 - -0.1 3,818,653 + +0.3 3,818,653 + -2.7 3,818,654 - -0.4 3,818,727 + -0.7 3,818,727 + +1.5 3,818,727 + -0.7 3,818,727 + +0.3 3,818,728 - -1.7 3,818,728 - -0.7 3,818,728 - -0.1 3,818,728 - -0.1 3,818,728 - -0.5 3,818,741 + -0.1 3,818,741 + -0.1 3,818,745 + -1.9 3,818,745 + -0.1 3,818,745 + -1.4 3,818,745 + -0.3 3,818,745 + +0.6 3,818,745 + -1.1 3,818,746 - -1.4 3,818,746 - +1.2 3,818,749 - -0.2 3,818,773 + +1.0 3,818,773 + +1.5 3,818,774 - -1.3 3,818,774 - -1.3 3,818,774 - +1.1 3,818,774 - -1.7 3,818,774 - -0.7 3,818,774 - -0.1 3,818,785 - -2.1 3,818,814 + +0.7 3,818,814 + -0.5 3,818,814 + +0.9 3,818,814 + -0.1 3,818,815 - +0.9 3,818,815 - +0.9 3,818,815 - -1.1 3,818,815 - +0.1 3,818,815 - -1.7 3,818,872 + -1.1 3,818,888 + +0.9 3,818,909 - -1.1 3,818,909 - +0.5 3,818,909 - +0.5 3,818,909 - +0.7 3,818,909 - +0.7 3,818,947 + -1.3 3,818,965 + -1.5 3,818,995 + +0.5 3,818,995 + -0.1 3,819,095 + +0.6 3,820,460 - +0.6 3,820,460 - -0.1 3,820,460 - -0.8 3,820,460 - +0.9 3,820,602 - -0.9 3,820,602 - +0.1 3,820,604 - -1.5 3,820,604 - -0.1 3,820,903 + +0.7 3,820,903 + +0.6 3,820,903 + +0.3 3,820,909 + +0.9 3,820,948 + -0.7 3,820,948 + +2.2 3,820,948 + +2.5 3,820,948 + +1.3 3,820,948 + -0.4 3,820,948 + -0.1 3,820,948 + +0.5 3,820,948 + +1.9 3,820,948 + +2.5 3,820,948 + +0.4 3,820,948 + -0.7 3,820,949 - -0.1 3,820,949 - -0.1 3,820,949 - -1.9 3,820,959 + +0.9 3,820,959 + +2.1 3,820,959 + -0.4 3,820,959 + -0.1 3,820,959 + -1.3 3,820,959 + +0.9 3,821,010 + -0.1 3,821,010 + +1.5 3,821,010 + +0.9 3,821,011 - -0.6 3,821,268 - +0.9 3,821,268 - +2.2
Or see this region's nucleotide sequence