Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2352
Experiment: Bacitracin 0.0009765625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.0009765625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,418,714 | - | Synpcc7942_2351 | 0.33 | +2.4 | |
2,419,052 | - | Synpcc7942_2351 | 0.61 | -1.0 | |
2,419,053 | + | Synpcc7942_2351 | 0.61 | -2.5 | |
2,419,118 | + | Synpcc7942_2351 | 0.67 | +0.6 | |
2,419,556 | - | -2.7 | |||
2,419,573 | + | +0.1 | |||
2,419,593 | - | -1.6 | |||
2,419,593 | - | -0.7 | |||
2,419,723 | - | lrtA | Synpcc7942_2352 | 0.24 | -2.5 |
2,419,729 | + | lrtA | Synpcc7942_2352 | 0.25 | +1.4 |
2,419,766 | - | lrtA | Synpcc7942_2352 | 0.31 | +1.0 |
2,419,767 | - | lrtA | Synpcc7942_2352 | 0.31 | -1.7 |
2,419,879 | + | lrtA | Synpcc7942_2352 | 0.49 | +0.8 |
2,419,879 | + | lrtA | Synpcc7942_2352 | 0.49 | +1.6 |
2,420,231 | + | -0.7 | |||
2,420,309 | + | +0.6 | |||
2,420,386 | + | +1.0 | |||
2,421,141 | + | +2.0 | |||
2,421,182 | + | -0.2 | |||
2,421,187 | + | -0.7 |
Or see this region's nucleotide sequence