Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2297

Experiment: Bacitracin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.0009765625 mg/ml
2,366,534	+	glnA	Synpcc7942_2296	0.35	+2.0
2,366,546	+	glnA	Synpcc7942_2296	0.36	+0.1
2,366,574	-	glnA	Synpcc7942_2296	0.38	-0.7
2,366,588	+	glnA	Synpcc7942_2296	0.40	-0.1
2,366,588	+	glnA	Synpcc7942_2296	0.40	+1.3
2,366,588	+				-0.7
2,366,596	-	glnA	Synpcc7942_2296	0.40	-0.1
2,366,601	-	glnA	Synpcc7942_2296	0.41	+0.5
2,366,644	-	glnA	Synpcc7942_2296	0.44	+2.3
2,366,710	-	glnA	Synpcc7942_2296	0.49	-0.7
2,366,710	-	glnA	Synpcc7942_2296	0.49	+1.1
2,366,722	+	glnA	Synpcc7942_2296	0.50	-1.7
2,366,723	+	glnA	Synpcc7942_2296	0.50	+1.0
2,366,730	-	glnA	Synpcc7942_2296	0.50	+1.7
2,366,730	-	glnA	Synpcc7942_2296	0.50	+1.2
2,366,731	-	glnA	Synpcc7942_2296	0.50	-0.7
2,366,731	-	glnA	Synpcc7942_2296	0.50	-1.3
2,366,737	-	glnA	Synpcc7942_2296	0.51	+1.2
2,366,755	-	glnA	Synpcc7942_2296	0.52	-2.9
2,366,756	-	glnA	Synpcc7942_2296	0.52	+0.1
2,366,792	-	glnA	Synpcc7942_2296	0.55	+3.0
2,366,802	+	glnA	Synpcc7942_2296	0.56	+0.3
2,366,807	+				-1.3
2,366,815	-	glnA	Synpcc7942_2296	0.57	-0.7
2,366,815	-	glnA	Synpcc7942_2296	0.57	+0.4
2,366,817	+	glnA	Synpcc7942_2296	0.57	-0.1
2,366,858	-	glnA	Synpcc7942_2296	0.60	-2.7
2,366,858	-	glnA	Synpcc7942_2296	0.60	-2.5
2,366,860	+	glnA	Synpcc7942_2296	0.60	+1.0
2,366,862	+	glnA	Synpcc7942_2296	0.61	+1.3
2,366,881	+	glnA	Synpcc7942_2296	0.62	+0.3
2,366,886	+	glnA	Synpcc7942_2296	0.62	-2.3
2,366,891	+	glnA	Synpcc7942_2296	0.63	+0.3
2,366,894	-	glnA	Synpcc7942_2296	0.63	+1.3
2,366,894	-				+0.3
2,366,905	+	glnA	Synpcc7942_2296	0.64	-0.5
2,366,925	-	glnA	Synpcc7942_2296	0.65	+0.7
2,366,935	-	glnA	Synpcc7942_2296	0.66	+0.6
2,366,935	-	glnA	Synpcc7942_2296	0.66	+0.8
2,366,935	-	glnA	Synpcc7942_2296	0.66	-0.3
2,366,965	+	glnA	Synpcc7942_2296	0.68	+2.6
2,366,985	-	glnA	Synpcc7942_2296	0.70	+5.7
2,367,016	+	glnA	Synpcc7942_2296	0.72	+0.6
2,367,021	+	glnA	Synpcc7942_2296	0.73	-0.7
2,367,021	+	glnA	Synpcc7942_2296	0.73	+1.2
2,367,021	+	glnA	Synpcc7942_2296	0.73	-2.7
2,367,021	+	glnA	Synpcc7942_2296	0.73	+0.3
2,367,024	-	glnA	Synpcc7942_2296	0.73	+0.3
2,367,024	-	glnA	Synpcc7942_2296	0.73	-0.0
2,367,029	-	glnA	Synpcc7942_2296	0.73	+0.7
2,367,029	-	glnA	Synpcc7942_2296	0.73	+2.5
2,367,029	-	glnA	Synpcc7942_2296	0.73	-3.9
2,367,029	-	glnA	Synpcc7942_2296	0.73	-0.1
2,367,050	-				-0.7
2,367,067	+	glnA	Synpcc7942_2296	0.76	-1.9
2,367,067	+	glnA	Synpcc7942_2296	0.76	+0.2
2,367,073	-	glnA	Synpcc7942_2296	0.77	+0.8
2,367,073	-	glnA	Synpcc7942_2296	0.77	-0.4
2,367,123	-	glnA	Synpcc7942_2296	0.81	+0.7
2,367,190	-	glnA	Synpcc7942_2296	0.86	-2.5
2,367,191	-	glnA	Synpcc7942_2296	0.86	+1.1
2,367,286	+				+1.6
2,367,294	-				-0.4
2,367,332	+				+0.1
2,367,361	-				+1.2
2,367,398	-				+0.5
2,367,406	-				-0.2
2,367,407	+				-1.3
2,367,407	+				+1.1
2,367,407	+				+0.3
2,367,407	+				+0.3
2,367,415	-				+0.3
2,367,415	-				-1.9
2,367,415	-				-1.3
2,367,417	+				-2.0
2,367,443	-				+0.5
2,367,468	+				+0.0
2,367,468	+				-1.0
2,367,476	-				+0.9
2,367,476	-				-3.0
2,367,493	+				-0.4
2,367,513	-				-1.7
2,367,516	+				+1.1
2,367,569	+				-1.3
2,367,576	-				+1.1
2,367,595	+				-2.6
2,367,610	+				+1.6
2,367,630	+				+0.4
2,367,630	+				+2.6
2,367,643	+				+0.8
2,367,651	-	tal	Synpcc7942_2297	0.10	+1.1
2,367,682	-	tal	Synpcc7942_2297	0.13	-2.7
2,367,757	-	tal	Synpcc7942_2297	0.19	-0.2
2,367,779	-	tal	Synpcc7942_2297	0.21	+4.4
2,367,780	-	tal	Synpcc7942_2297	0.21	+1.1
2,367,818	-	tal	Synpcc7942_2297	0.24	+0.7
2,367,844	+	tal	Synpcc7942_2297	0.26	-0.5
2,367,844	+	tal	Synpcc7942_2297	0.26	-0.8
2,367,849	+	tal	Synpcc7942_2297	0.27	+0.4
2,367,860	-	tal	Synpcc7942_2297	0.28	-3.3
2,367,901	-	tal	Synpcc7942_2297	0.31	+0.7
2,367,922	+	tal	Synpcc7942_2297	0.33	+0.1
2,367,925	-	tal	Synpcc7942_2297	0.33	-1.9
2,367,930	-	tal	Synpcc7942_2297	0.34	-0.7
2,367,938	-	tal	Synpcc7942_2297	0.34	-1.1
2,367,940	-	tal	Synpcc7942_2297	0.35	-2.3
2,367,950	+	tal	Synpcc7942_2297	0.35	-0.7
2,367,950	+	tal	Synpcc7942_2297	0.35	-0.4
2,367,989	-	tal	Synpcc7942_2297	0.39	+1.3
2,368,125	-				-0.7
2,368,190	+	tal	Synpcc7942_2297	0.55	+0.5
2,368,190	+	tal	Synpcc7942_2297	0.55	-0.7
2,368,198	-	tal	Synpcc7942_2297	0.56	-0.6
2,368,207	+	tal	Synpcc7942_2297	0.57	+0.9
2,368,212	+	tal	Synpcc7942_2297	0.57	+0.3
2,368,212	+	tal	Synpcc7942_2297	0.57	-2.0
2,368,227	-	tal	Synpcc7942_2297	0.59	+0.1
2,368,283	-	tal	Synpcc7942_2297	0.63	+0.5
2,368,340	+	tal	Synpcc7942_2297	0.68	-0.3
2,368,463	+	tal	Synpcc7942_2297	0.78	-0.4
2,368,511	+	tal	Synpcc7942_2297	0.82	-3.1
2,368,527	+	tal	Synpcc7942_2297	0.84	+0.3
2,368,528	-	tal	Synpcc7942_2297	0.84	-0.3
2,368,535	-	tal	Synpcc7942_2297	0.84	-2.0
2,368,535	-	tal	Synpcc7942_2297	0.84	-1.7
2,368,536	+	tal	Synpcc7942_2297	0.84	-3.3
2,368,597	+	tal	Synpcc7942_2297	0.90	-1.3
2,368,602	+				-0.1
2,368,605	-				-1.7
2,368,605	-				-3.0
2,368,607	+				-1.7
2,368,612	+				-2.5
2,368,612	+				+0.1
2,368,615	-				-1.3
2,368,615	-				-1.8
2,368,622	-				-0.7
2,368,649	-				-1.9
2,368,652	+				+1.9
2,368,660	-				-0.7
2,368,660	-				-0.1
2,368,672	+				+0.3
2,368,690	-				+0.3
2,368,717	+				-3.1
2,368,717	+				+3.5
2,368,725	-				+0.2
2,368,725	-				-1.3
2,368,751	+				-0.1
2,368,839	-				-3.5
2,368,871	+				+0.3
2,368,874	-				+0.3
2,368,891	-				-0.7
2,368,891	-				-2.7
2,368,891	-				-3.1
2,368,897	-				-0.5
2,368,923	+				-1.3
2,368,929	+				+0.3
2,368,929	+				+2.8
2,368,944	+				+0.3
2,368,952	-				-0.7
2,368,954	+				-0.7
2,368,961	+				+0.3
2,368,968	-				-2.0
2,368,969	-				-1.3
2,369,181	+	ruvA	Synpcc7942_2298	0.34	+1.1
2,369,400	+	ruvA	Synpcc7942_2298	0.70	+1.3
2,369,442	-	ruvA	Synpcc7942_2298	0.76	+0.9
2,369,470	+				-0.7
2,369,577	+				+0.1