Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2100

Experiment: Bacitracin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.0009765625 mg/ml
2,180,891	+	rfbC	Synpcc7942_2098	0.79	+0.4
2,180,899	-	rfbC	Synpcc7942_2098	0.80	-2.2
2,180,946	+	rfbC	Synpcc7942_2098	0.89	+2.0
2,180,954	-				+1.0
2,180,981	+				-0.7
2,181,019	+				+3.4
2,181,027	+				+4.5
2,181,037	+				+3.9
2,181,045	-				+4.8
2,181,174	-	rfbD	Synpcc7942_2099	0.19	+4.8
2,181,179	+	rfbD	Synpcc7942_2099	0.20	+2.8
2,181,207	-	rfbD	Synpcc7942_2099	0.23	+0.9
2,181,328	+	rfbD	Synpcc7942_2099	0.37	+3.0
2,181,342	-	rfbD	Synpcc7942_2099	0.39	+3.9
2,181,382	+	rfbD	Synpcc7942_2099	0.43	+3.8
2,181,449	+	rfbD	Synpcc7942_2099	0.51	+4.1
2,181,553	+	rfbD	Synpcc7942_2099	0.63	+0.8
2,181,561	-	rfbD	Synpcc7942_2099	0.64	+3.6
2,181,614	+	rfbD	Synpcc7942_2099	0.70	+3.9
2,181,622	-	rfbD	Synpcc7942_2099	0.71	-1.2
2,181,710	+	rfbD	Synpcc7942_2099	0.81	+0.4
2,181,718	-	rfbD	Synpcc7942_2099	0.82	+1.1
2,181,727	+	rfbD	Synpcc7942_2099	0.83	+2.3
2,181,763	+	rfbD	Synpcc7942_2099	0.87	+4.0
2,181,764	+	rfbD	Synpcc7942_2099	0.87	+2.9
2,181,773	+	rfbD	Synpcc7942_2099	0.88	+4.3
2,181,786	-	rfbD	Synpcc7942_2099	0.90	+2.2
2,181,815	+				-0.2
2,181,823	-				+1.8
2,181,890	-				-4.0
2,181,913	+				-0.7
2,181,921	-				+3.3
2,181,935	-				+0.3
2,182,006	-	rfbB	Synpcc7942_2100	0.13	+0.2
2,182,007	+	rfbB	Synpcc7942_2100	0.13	-0.2
2,182,015	-	rfbB	Synpcc7942_2100	0.13	+0.3
2,182,015	-	rfbB	Synpcc7942_2100	0.13	-2.5
2,182,015	-	rfbB	Synpcc7942_2100	0.13	+0.1
2,182,038	-	rfbB	Synpcc7942_2100	0.16	+1.3
2,182,053	+	rfbB	Synpcc7942_2100	0.17	+1.1
2,182,093	-	rfbB	Synpcc7942_2100	0.21	+0.2
2,182,093	-	rfbB	Synpcc7942_2100	0.21	+1.1
2,182,107	-	rfbB	Synpcc7942_2100	0.22	+0.3
2,182,152	-	rfbB	Synpcc7942_2100	0.26	+1.6
2,182,202	-	rfbB	Synpcc7942_2100	0.31	+0.7
2,182,232	+	rfbB	Synpcc7942_2100	0.34	+0.2
2,182,258	+	rfbB	Synpcc7942_2100	0.36	-0.9
2,182,271	-	rfbB	Synpcc7942_2100	0.37	-1.7
2,182,278	+	rfbB	Synpcc7942_2100	0.38	+3.5
2,182,279	+	rfbB	Synpcc7942_2100	0.38	+0.3
2,182,286	-	rfbB	Synpcc7942_2100	0.39	+0.2
2,182,287	-	rfbB	Synpcc7942_2100	0.39	+1.5
2,182,362	-	rfbB	Synpcc7942_2100	0.46	-2.0
2,182,383	+	rfbB	Synpcc7942_2100	0.48	+0.3
2,182,395	+	rfbB	Synpcc7942_2100	0.49	+1.1
2,182,403	-	rfbB	Synpcc7942_2100	0.50	-0.7
2,182,405	-	rfbB	Synpcc7942_2100	0.50	-0.2
2,182,405	-	rfbB	Synpcc7942_2100	0.50	+0.0
2,182,457	-	rfbB	Synpcc7942_2100	0.55	-0.2
2,182,475	-	rfbB	Synpcc7942_2100	0.56	-1.4
2,182,489	-	rfbB	Synpcc7942_2100	0.58	-1.2
2,182,566	-	rfbB	Synpcc7942_2100	0.65	+1.5
2,182,571	+	rfbB	Synpcc7942_2100	0.65	-1.2
2,182,584	-	rfbB	Synpcc7942_2100	0.66	+1.3
2,182,584	-	rfbB	Synpcc7942_2100	0.66	+0.6
2,182,617	-	rfbB	Synpcc7942_2100	0.69	+2.5
2,182,641	-	rfbB	Synpcc7942_2100	0.72	-0.6
2,182,762	+	rfbB	Synpcc7942_2100	0.83	+0.8
2,182,921	-				-1.7
2,182,968	-				-2.7
2,182,991	+				-2.4
2,182,991	+				+1.6
2,182,991	+				-0.4
2,182,999	-				-1.7
2,183,003	+				+0.5
2,183,005	+				-2.7
2,183,005	+				-1.0
2,183,013	-				+2.3
2,183,013	-				+0.5
2,183,046	-	rfbA	Synpcc7942_2101	0.12	-1.7
2,183,063	+	rfbA	Synpcc7942_2101	0.14	-0.8
2,183,115	+	rfbA	Synpcc7942_2101	0.20	+1.0
2,183,115	+	rfbA	Synpcc7942_2101	0.20	-2.0
2,183,115	+	rfbA	Synpcc7942_2101	0.20	+2.7
2,183,115	-	rfbA	Synpcc7942_2101	0.20	+0.3
2,183,115	-	rfbA	Synpcc7942_2101	0.20	+2.2
2,183,123	-	rfbA	Synpcc7942_2101	0.21	+3.3
2,183,123	-	rfbA	Synpcc7942_2101	0.21	+0.8
2,183,141	+	rfbA	Synpcc7942_2101	0.23	-1.7
2,183,177	+	rfbA	Synpcc7942_2101	0.27	+3.0
2,183,177	+	rfbA	Synpcc7942_2101	0.27	-1.4
2,183,207	-	rfbA	Synpcc7942_2101	0.30	+0.3
2,183,214	-	rfbA	Synpcc7942_2101	0.31	+1.7
2,183,238	+	rfbA	Synpcc7942_2101	0.34	+2.2
2,183,338	+	rfbA	Synpcc7942_2101	0.45	-1.2
2,183,383	-	rfbA	Synpcc7942_2101	0.50	+0.3
2,183,432	+	rfbA	Synpcc7942_2101	0.55	-2.8
2,183,432	+	rfbA	Synpcc7942_2101	0.55	+0.9
2,183,457	+	rfbA	Synpcc7942_2101	0.58	-1.2
2,183,466	+	rfbA	Synpcc7942_2101	0.59	-2.8
2,183,501	+	rfbA	Synpcc7942_2101	0.63	+1.6
2,183,513	-	rfbA	Synpcc7942_2101	0.65	+0.3
2,183,540	-	rfbA	Synpcc7942_2101	0.68	+0.1
2,183,549	+	rfbA	Synpcc7942_2101	0.69	+2.0
2,183,557	-	rfbA	Synpcc7942_2101	0.70	+0.3
2,183,574	+	rfbA	Synpcc7942_2101	0.72	-0.7
2,183,592	-	rfbA	Synpcc7942_2101	0.74	+0.1
2,183,609	+	rfbA	Synpcc7942_2101	0.75	-0.7
2,183,628	+	rfbA	Synpcc7942_2101	0.78	-2.5
2,183,628	+	rfbA	Synpcc7942_2101	0.78	+2.7
2,183,636	-	rfbA	Synpcc7942_2101	0.79	+0.8
2,183,636	-	rfbA	Synpcc7942_2101	0.79	-2.0
2,183,721	+	rfbA	Synpcc7942_2101	0.88	-0.7
2,183,740	-				-2.8
2,183,746	+				-3.5
2,183,754	-				+1.3
2,183,763	+				-2.5
2,183,771	-				-0.2
2,183,804	-				+0.6
2,183,813	-				+0.4
2,183,827	-				+1.1
2,183,841	+				+1.8
2,183,849	+				+1.3
2,183,849	-				-2.0
2,183,862	+		Synpcc7942_2102	0.10	+3.0
2,183,897	+		Synpcc7942_2102	0.25	+2.3
2,183,905	-		Synpcc7942_2102	0.28	+2.6
2,183,905	-		Synpcc7942_2102	0.28	+2.1
2,183,905	-		Synpcc7942_2102	0.28	+1.9
2,183,905	-		Synpcc7942_2102	0.28	+3.5
2,183,924	+		Synpcc7942_2102	0.36	+1.6
2,183,932	-		Synpcc7942_2102	0.40	+1.4