Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1644

Experiment: Bacitracin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.0009765625 mg/ml
1,711,106	-		Synpcc7942_1643	0.50	+0.8
1,711,136	-				+1.3
1,711,138	+		Synpcc7942_1643	0.52	-2.2
1,711,146	-		Synpcc7942_1643	0.52	-1.2
1,711,173	-		Synpcc7942_1643	0.54	+2.0
1,711,175	+		Synpcc7942_1643	0.54	+0.9
1,711,222	-		Synpcc7942_1643	0.57	+0.3
1,711,234	+		Synpcc7942_1643	0.58	-0.7
1,711,242	-		Synpcc7942_1643	0.58	+1.2
1,711,242	-		Synpcc7942_1643	0.58	-2.5
1,711,242	-		Synpcc7942_1643	0.58	-1.5
1,711,267	+		Synpcc7942_1643	0.60	-1.2
1,711,305	-		Synpcc7942_1643	0.63	+1.7
1,711,332	-		Synpcc7942_1643	0.64	-1.7
1,711,360	+		Synpcc7942_1643	0.66	-2.7
1,711,368	-		Synpcc7942_1643	0.67	+1.6
1,711,368	-		Synpcc7942_1643	0.67	-0.7
1,711,368	-		Synpcc7942_1643	0.67	+0.8
1,711,369	+		Synpcc7942_1643	0.67	-2.2
1,711,377	-		Synpcc7942_1643	0.67	+2.0
1,711,377	-		Synpcc7942_1643	0.67	+1.2
1,711,495	+		Synpcc7942_1643	0.75	-1.2
1,711,521	+		Synpcc7942_1643	0.77	+1.3
1,711,521	+		Synpcc7942_1643	0.77	-1.2
1,711,521	+		Synpcc7942_1643	0.77	+0.3
1,711,521	+		Synpcc7942_1643	0.77	+0.5
1,711,521	+		Synpcc7942_1643	0.77	+1.5
1,711,529	-		Synpcc7942_1643	0.77	-4.2
1,711,529	-		Synpcc7942_1643	0.77	+0.8
1,711,532	+		Synpcc7942_1643	0.78	+0.0
1,711,540	-		Synpcc7942_1643	0.78	-1.0
1,711,542	+		Synpcc7942_1643	0.78	+1.6
1,711,542	+		Synpcc7942_1643	0.78	-1.5
1,711,544	+		Synpcc7942_1643	0.78	+1.3
1,711,550	-		Synpcc7942_1643	0.79	+1.9
1,711,621	-		Synpcc7942_1643	0.83	+1.3
1,711,627	-		Synpcc7942_1643	0.84	+1.1
1,711,644	-		Synpcc7942_1643	0.85	+0.3
1,711,650	+		Synpcc7942_1643	0.85	+0.4
1,711,650	+		Synpcc7942_1643	0.85	+3.6
1,711,677	+		Synpcc7942_1643	0.87	+1.3
1,711,693	+		Synpcc7942_1643	0.88	+2.1
1,711,693	+		Synpcc7942_1643	0.88	-0.7
1,711,701	-		Synpcc7942_1643	0.89	+1.5
1,711,718	+		Synpcc7942_1643	0.90	+1.2
1,711,736	-				-1.7
1,711,743	+				+1.9
1,711,763	+				-2.0
1,711,771	-				-1.7
1,711,771	-				-0.8
1,711,776	-				+3.3
1,711,776	-				+1.3
1,711,800	+				+1.0
1,711,852	+				-1.7
1,711,852	+				-3.1
1,711,860	-				+1.3
1,711,880	-				+0.9
1,711,893	+				+1.3
1,711,893	+				+0.8
1,711,901	+				+2.3
1,711,906	-				-0.7
1,711,912	+				+1.6
1,711,917	+				+0.2
1,711,932	-				-2.0
1,711,934	-				+2.3
1,711,935	-				-1.2
1,711,935	-				-0.5
1,711,948	-				-0.1
1,711,948	-				-1.7
1,711,948	-				+0.2
1,711,987	+				-1.7
1,711,995	-				+0.9
1,712,040	+				+0.3
1,712,043	-				+1.9
1,712,050	+				+0.2
1,712,050	+				-0.4
1,712,058	-				-2.2
1,712,058	-				-0.5
1,712,061	+				+0.9
1,712,063	+				+2.3
1,712,063	+				-0.4
1,712,069	-				+0.6
1,712,069	-				+0.8
1,712,103	-		Synpcc7942_1644	0.11	+1.9
1,712,105	-		Synpcc7942_1644	0.11	+1.3
1,712,119	+		Synpcc7942_1644	0.13	+1.6
1,712,129	+		Synpcc7942_1644	0.14	-0.1
1,712,137	-		Synpcc7942_1644	0.15	-0.5
1,712,137	-		Synpcc7942_1644	0.15	+0.0
1,712,151	+		Synpcc7942_1644	0.17	+2.3
1,712,202	+		Synpcc7942_1644	0.23	-2.2
1,712,204	+		Synpcc7942_1644	0.24	-0.6
1,712,204	+		Synpcc7942_1644	0.24	+1.2
1,712,204	+		Synpcc7942_1644	0.24	-0.1
1,712,204	+		Synpcc7942_1644	0.24	+1.5
1,712,204	+		Synpcc7942_1644	0.24	+1.8
1,712,204	+		Synpcc7942_1644	0.24	+0.0
1,712,204	+		Synpcc7942_1644	0.24	+0.3
1,712,204	+		Synpcc7942_1644	0.24	-1.5
1,712,204	+		Synpcc7942_1644	0.24	+0.1
1,712,204	+		Synpcc7942_1644	0.24	-0.5
1,712,212	-		Synpcc7942_1644	0.25	+0.3
1,712,212	-		Synpcc7942_1644	0.25	+0.2
1,712,212	-		Synpcc7942_1644	0.25	+1.1
1,712,219	+		Synpcc7942_1644	0.25	-2.7
1,712,219	+		Synpcc7942_1644	0.25	+0.1
1,712,226	+		Synpcc7942_1644	0.26	-1.1
1,712,227	-		Synpcc7942_1644	0.26	-0.7
1,712,244	-		Synpcc7942_1644	0.29	-0.7
1,712,275	+		Synpcc7942_1644	0.32	+0.2
1,712,352	+		Synpcc7942_1644	0.42	-0.5
1,712,357	+		Synpcc7942_1644	0.43	-1.7
1,712,360	-		Synpcc7942_1644	0.43	+0.3
1,712,388	+		Synpcc7942_1644	0.47	+0.5
1,712,404	+				-0.7
1,712,426	-		Synpcc7942_1644	0.51	-1.7
1,712,427	+		Synpcc7942_1644	0.51	-2.2
1,712,451	-		Synpcc7942_1644	0.54	+1.0
1,712,526	+		Synpcc7942_1644	0.64	-1.0
1,712,534	-		Synpcc7942_1644	0.65	-2.2
1,712,534	-		Synpcc7942_1644	0.65	-2.8
1,712,534	-		Synpcc7942_1644	0.65	-1.2
1,712,534	-		Synpcc7942_1644	0.65	+1.3
1,712,601	-		Synpcc7942_1644	0.73	-0.7
1,712,607	-		Synpcc7942_1644	0.74	+0.2
1,712,619	+		Synpcc7942_1644	0.75	+0.6
1,712,621	+		Synpcc7942_1644	0.75	-0.7
1,712,627	-		Synpcc7942_1644	0.76	-1.7
1,712,687	+		Synpcc7942_1644	0.84	-0.1
1,712,687	+		Synpcc7942_1644	0.84	-1.2
1,712,690	-		Synpcc7942_1644	0.84	+1.1
1,712,720	-		Synpcc7942_1644	0.88	-0.4
1,712,731	+		Synpcc7942_1644	0.89	-2.8
1,712,731	+		Synpcc7942_1644	0.89	-2.7
1,712,739	-				-0.7
1,712,739	-				+0.3
1,712,762	+				+0.3
1,712,777	+				+0.3
1,712,777	+				+1.6
1,712,785	-				+1.0
1,712,840	+				+0.3
1,712,847	-				+0.3
1,712,858	+				+0.5
1,712,859	-				+0.7
1,712,866	-				+2.2
1,712,874	-				+0.6
1,712,874	-				+0.9
1,712,883	+				-0.2
1,712,884	+				+1.2
1,712,916	+				-0.7
1,712,916	+				+1.9
1,712,919	-				-0.7
1,712,931	-				+0.1
1,713,321	-				+0.6
1,713,321	-				+0.6
1,713,336	-				-0.1
1,713,378	+				-0.4
1,713,466	-	rnc	Synpcc7942_1645	0.18	+2.1
1,713,469	+	rnc	Synpcc7942_1645	0.18	+0.3
1,713,479	+	rnc	Synpcc7942_1645	0.20	-0.2
1,713,516	+	rnc	Synpcc7942_1645	0.25	-1.1
1,713,529	-	rnc	Synpcc7942_1645	0.26	+1.5
1,713,529	-	rnc	Synpcc7942_1645	0.26	+0.3
1,713,545	-	rnc	Synpcc7942_1645	0.29	+0.3
1,713,556	+	rnc	Synpcc7942_1645	0.30	-2.0
1,713,559	+	rnc	Synpcc7942_1645	0.31	-2.2
1,713,567	+	rnc	Synpcc7942_1645	0.32	-0.4
1,713,568	-	rnc	Synpcc7942_1645	0.32	+1.1
1,713,575	-	rnc	Synpcc7942_1645	0.33	+2.5
1,713,585	+	rnc	Synpcc7942_1645	0.34	-0.7
1,713,590	+	rnc	Synpcc7942_1645	0.35	+1.9
1,713,597	+	rnc	Synpcc7942_1645	0.36	+0.8
1,713,643	+	rnc	Synpcc7942_1645	0.42	+1.9
1,713,647	+	rnc	Synpcc7942_1645	0.42	+1.3
1,713,656	-	rnc	Synpcc7942_1645	0.44	+1.7
1,713,670	+	rnc	Synpcc7942_1645	0.45	+0.9
1,713,671	+				+0.3
1,713,679	-	rnc	Synpcc7942_1645	0.47	+0.3
1,713,683	+	rnc	Synpcc7942_1645	0.47	-3.5
1,713,701	+	rnc	Synpcc7942_1645	0.50	-1.1
1,713,744	-	rnc	Synpcc7942_1645	0.55	-4.3
1,713,746	+	rnc	Synpcc7942_1645	0.56	+0.4
1,713,750	+	rnc	Synpcc7942_1645	0.56	-1.0
1,713,750	+	rnc	Synpcc7942_1645	0.56	-2.0
1,713,758	-	rnc	Synpcc7942_1645	0.57	-1.2
1,713,760	+	rnc	Synpcc7942_1645	0.58	-0.3
1,713,760	+	rnc	Synpcc7942_1645	0.58	-2.0
1,713,768	-	rnc	Synpcc7942_1645	0.59	-0.7
1,713,789	-	rnc	Synpcc7942_1645	0.61	+0.3
1,713,789	-	rnc	Synpcc7942_1645	0.61	+2.7