Experiment: LB, pH6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3216 and Ac3H11_3217 are separated by 405 nucleotides Ac3H11_3217 and Ac3H11_3218 are separated by 220 nucleotides
Ac3H11_3216 - Flagellar hook-length control protein FliK, at 121,294 to 125,079
_3216
Ac3H11_3217 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 125,485 to 126,645
_3217
Ac3H11_3218 - Response regulator NasT, at 126,866 to 127,504
_3218
Position (kb) 125
126
127 Strain fitness (log2 ratio) -2
-1
0
1 at 124.550 kb on + strand, within Ac3H11_3216 at 124.550 kb on + strand, within Ac3H11_3216 at 124.551 kb on - strand, within Ac3H11_3216 at 124.551 kb on - strand, within Ac3H11_3216 at 124.570 kb on - strand, within Ac3H11_3216 at 124.705 kb on + strand at 124.706 kb on - strand at 124.706 kb on - strand at 124.706 kb on - strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.788 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.791 kb on - strand at 124.791 kb on - strand at 124.791 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 125.091 kb on - strand at 125.096 kb on + strand at 125.121 kb on + strand at 125.121 kb on + strand at 125.122 kb on - strand at 125.122 kb on - strand at 125.142 kb on + strand at 125.143 kb on - strand at 125.173 kb on + strand at 125.174 kb on - strand at 125.174 kb on - strand at 125.174 kb on - strand at 125.302 kb on + strand at 125.302 kb on + strand at 125.369 kb on - strand at 125.373 kb on - strand at 125.373 kb on - strand at 125.415 kb on + strand at 125.448 kb on + strand at 125.449 kb on - strand at 125.449 kb on - strand at 125.486 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.538 kb on - strand at 125.556 kb on - strand at 125.556 kb on - strand at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.705 kb on + strand, within Ac3H11_3217 at 125.705 kb on + strand, within Ac3H11_3217 at 125.706 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 126.122 kb on + strand, within Ac3H11_3217 at 126.122 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.276 kb on - strand, within Ac3H11_3217 at 126.430 kb on + strand, within Ac3H11_3217 at 126.431 kb on - strand, within Ac3H11_3217 at 126.431 kb on - strand, within Ac3H11_3217 at 126.437 kb on + strand, within Ac3H11_3217 at 126.437 kb on + strand, within Ac3H11_3217 at 126.438 kb on - strand, within Ac3H11_3217 at 126.659 kb on + strand at 126.660 kb on - strand at 126.660 kb on - strand at 126.660 kb on - strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.687 kb on + strand at 126.687 kb on + strand at 126.688 kb on - strand at 126.688 kb on - strand at 126.688 kb on - strand at 126.688 kb on - strand at 126.688 kb on - strand at 126.718 kb on - strand at 126.739 kb on + strand at 126.739 kb on + strand at 126.739 kb on + strand at 126.740 kb on - strand at 126.742 kb on + strand at 126.743 kb on - strand at 126.743 kb on - strand at 126.877 kb on + strand at 126.878 kb on - strand at 126.878 kb on - strand at 127.223 kb on + strand, within Ac3H11_3218 at 127.223 kb on + strand, within Ac3H11_3218 at 127.224 kb on - strand, within Ac3H11_3218 at 127.502 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH6 remove 124,550 + Ac3H11_3216 0.86 -0.5 124,550 + Ac3H11_3216 0.86 +0.3 124,551 - Ac3H11_3216 0.86 +0.4 124,551 - Ac3H11_3216 0.86 +0.2 124,570 - Ac3H11_3216 0.87 +0.2 124,705 + -0.5 124,706 - -0.3 124,706 - +0.3 124,706 - +0.4 124,709 + +0.4 124,709 + -0.6 124,709 + +0.6 124,709 + -0.1 124,709 + +0.6 124,709 + -0.3 124,709 + -0.1 124,709 + -0.0 124,709 + +1.1 124,709 + +0.0 124,709 + +0.1 124,709 + -0.1 124,709 + +0.3 124,709 + +0.8 124,709 + -0.7 124,709 + +0.6 124,709 + +1.6 124,709 + -0.1 124,709 + -0.0 124,709 + +0.3 124,709 + -1.7 124,710 - +0.4 124,710 - -0.9 124,710 - -0.0 124,710 - -0.7 124,710 - +0.3 124,710 - +0.5 124,710 - +0.4 124,710 - -0.1 124,710 - +0.3 124,710 - -0.2 124,710 - +0.3 124,710 - +1.0 124,710 - -0.2 124,710 - -0.4 124,710 - -0.0 124,710 - +1.2 124,710 - +0.3 124,788 + +0.3 124,790 + -0.4 124,790 + +0.4 124,790 + -0.9 124,790 + +0.2 124,790 + +0.4 124,790 + -0.6 124,791 - -0.6 124,791 - -0.4 124,791 - +0.1 124,846 - -1.7 124,846 - -1.0 124,846 - -0.1 124,846 - -0.1 124,987 + +1.1 124,987 + -0.0 124,987 + -1.1 124,987 + -0.5 124,991 + +0.2 124,991 + -0.2 124,991 + -0.3 124,991 + +0.0 124,991 + +0.8 124,991 + -0.5 124,991 + +0.1 125,091 - -0.6 125,096 + +0.6 125,121 + +0.0 125,121 + -0.5 125,122 - +0.1 125,122 - +0.3 125,142 + -1.6 125,143 - +0.1 125,173 + +1.1 125,174 - -0.7 125,174 - -0.2 125,174 - -0.0 125,302 + -0.5 125,302 + +1.4 125,369 - +0.9 125,373 - +0.2 125,373 - -0.9 125,415 + +0.4 125,448 + -0.1 125,449 - -0.3 125,449 - +1.0 125,486 + +0.4 125,537 + -2.4 125,537 + +0.4 125,537 + +0.1 125,537 + +0.3 125,537 + -0.1 125,537 + -0.4 125,537 + +0.4 125,537 + +1.5 125,537 + +0.0 125,537 + -0.1 125,538 - -1.7 125,556 - +0.5 125,556 - -1.0 125,687 + Ac3H11_3217 0.17 +0.2 125,687 + Ac3H11_3217 0.17 +0.6 125,687 + Ac3H11_3217 0.17 -1.3 125,687 + Ac3H11_3217 0.17 +0.8 125,687 + Ac3H11_3217 0.17 +0.7 125,687 + Ac3H11_3217 0.17 -0.0 125,687 + Ac3H11_3217 0.17 +0.1 125,688 - Ac3H11_3217 0.17 -0.8 125,688 - Ac3H11_3217 0.17 -1.5 125,688 - Ac3H11_3217 0.17 -0.0 125,688 - Ac3H11_3217 0.17 -0.1 125,688 - Ac3H11_3217 0.17 +0.4 125,688 - Ac3H11_3217 0.17 +1.1 125,699 + Ac3H11_3217 0.18 -0.2 125,699 + Ac3H11_3217 0.18 -0.6 125,699 + Ac3H11_3217 0.18 -0.0 125,699 + Ac3H11_3217 0.18 +1.1 125,700 - Ac3H11_3217 0.19 -0.5 125,700 - Ac3H11_3217 0.19 +0.3 125,700 - Ac3H11_3217 0.19 +0.2 125,705 + Ac3H11_3217 0.19 +0.5 125,705 + Ac3H11_3217 0.19 -1.0 125,706 - Ac3H11_3217 0.19 +0.2 125,748 - Ac3H11_3217 0.23 -0.8 125,748 - Ac3H11_3217 0.23 -1.8 125,748 - Ac3H11_3217 0.23 +0.9 125,810 + Ac3H11_3217 0.28 -0.8 125,810 + Ac3H11_3217 0.28 +0.4 125,810 + Ac3H11_3217 0.28 -0.8 125,810 + Ac3H11_3217 0.28 -0.1 125,810 + Ac3H11_3217 0.28 -1.1 125,810 + Ac3H11_3217 0.28 -0.0 125,810 + Ac3H11_3217 0.28 +0.7 125,810 + Ac3H11_3217 0.28 +0.0 125,810 + Ac3H11_3217 0.28 -0.6 125,810 + Ac3H11_3217 0.28 +0.1 125,810 + Ac3H11_3217 0.28 -0.9 125,810 + Ac3H11_3217 0.28 -0.2 125,811 - Ac3H11_3217 0.28 +0.3 125,811 - Ac3H11_3217 0.28 +0.1 125,811 - Ac3H11_3217 0.28 +0.3 125,811 - Ac3H11_3217 0.28 -1.1 125,811 - Ac3H11_3217 0.28 +0.3 125,811 - Ac3H11_3217 0.28 +1.3 125,811 - Ac3H11_3217 0.28 +0.8 125,811 - Ac3H11_3217 0.28 +0.4 125,811 - Ac3H11_3217 0.28 +0.2 125,811 - Ac3H11_3217 0.28 -0.3 125,811 - Ac3H11_3217 0.28 -0.3 126,122 + Ac3H11_3217 0.55 +0.2 126,122 + Ac3H11_3217 0.55 -0.7 126,275 + Ac3H11_3217 0.68 +0.1 126,275 + Ac3H11_3217 0.68 -1.0 126,275 + Ac3H11_3217 0.68 +1.2 126,275 + Ac3H11_3217 0.68 +0.2 126,275 + Ac3H11_3217 0.68 +1.0 126,276 - Ac3H11_3217 0.68 +0.0 126,430 + Ac3H11_3217 0.81 +0.3 126,431 - Ac3H11_3217 0.81 -0.2 126,431 - Ac3H11_3217 0.81 +0.5 126,437 + Ac3H11_3217 0.82 -0.1 126,437 + Ac3H11_3217 0.82 -0.2 126,438 - Ac3H11_3217 0.82 +0.4 126,659 + +0.1 126,660 - +0.3 126,660 - -0.2 126,660 - +0.5 126,685 + -0.0 126,685 + +0.2 126,685 + -1.4 126,685 + -1.0 126,685 + -0.0 126,685 + -1.3 126,685 + -0.4 126,685 + -0.5 126,685 + +0.4 126,685 + -0.8 126,685 + -0.5 126,685 + -0.1 126,685 + -1.2 126,685 + +0.5 126,685 + -0.4 126,685 + -0.1 126,686 - +0.4 126,686 - +1.3 126,686 - -0.4 126,686 - -0.1 126,686 - -0.2 126,686 - +0.4 126,686 - +0.8 126,686 - -0.3 126,686 - +1.5 126,686 - -0.2 126,686 - +0.2 126,686 - +0.4 126,686 - +0.2 126,686 - -0.1 126,686 - -0.9 126,686 - -0.3 126,686 - -0.1 126,686 - +0.5 126,687 + +1.4 126,687 + +0.1 126,688 - -0.5 126,688 - -0.9 126,688 - +0.3 126,688 - -0.4 126,688 - +0.0 126,718 - -2.3 126,739 + +1.0 126,739 + +0.7 126,739 + -0.1 126,740 - +0.2 126,742 + -1.7 126,743 - -0.1 126,743 - -0.3 126,877 + +0.2 126,878 - +0.4 126,878 - +0.7 127,223 + Ac3H11_3218 0.56 -1.2 127,223 + Ac3H11_3218 0.56 -1.2 127,224 - Ac3H11_3218 0.56 -0.6 127,502 + -0.5
Or see this region's nucleotide sequence