Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_721

Experiment: LB, pH5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_719 and Ac3H11_720 are separated by 164 nucleotidesAc3H11_720 and Ac3H11_721 are separated by 97 nucleotidesAc3H11_721 and Ac3H11_722 are separated by 218 nucleotides Ac3H11_719 - Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate, at 9,069 to 10,439 _719 Ac3H11_720 - putative inner membrane protein, at 10,604 to 11,050 _720 Ac3H11_721 - Phosphate starvation-inducible protein PsiF, at 11,148 to 11,489 _721 Ac3H11_722 - Arginyl-tRNA synthetase (EC 6.1.1.19), at 11,708 to 13,429 _722 Position (kb) 11 12Strain fitness (log2 ratio) -1 0 1 2at 10.749 kb on - strand, within Ac3H11_720at 10.749 kb on - strand, within Ac3H11_720at 10.749 kb on - strand, within Ac3H11_720at 10.749 kb on - strand, within Ac3H11_720at 10.749 kb on - strand, within Ac3H11_720at 10.749 kb on - strand, within Ac3H11_720at 11.048 kb on + strandat 11.049 kb on - strandat 11.049 kb on - strandat 11.061 kb on + strandat 11.062 kb on - strandat 11.062 kb on - strandat 11.069 kb on + strandat 11.070 kb on - strandat 11.105 kb on + strandat 11.105 kb on + strandat 11.106 kb on - strandat 11.106 kb on - strandat 11.106 kb on - strandat 11.149 kb on + strandat 11.149 kb on + strandat 11.149 kb on + strandat 11.149 kb on + strandat 11.150 kb on - strandat 11.150 kb on - strandat 11.504 kb on + strandat 11.504 kb on + strandat 11.504 kb on + strandat 11.504 kb on + strandat 11.505 kb on - strandat 11.505 kb on - strandat 11.505 kb on - strandat 11.505 kb on - strandat 11.505 kb on - strandat 11.505 kb on - strandat 11.543 kb on + strandat 11.543 kb on + strandat 11.543 kb on + strandat 11.543 kb on + strandat 11.543 kb on + strandat 11.544 kb on - strandat 11.544 kb on - strandat 11.544 kb on - strandat 11.544 kb on - strandat 11.581 kb on - strandat 11.697 kb on - strandat 11.697 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB, pH5
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10,749 - Ac3H11_720 0.32 +0.0
10,749 - Ac3H11_720 0.32 +1.2
10,749 - Ac3H11_720 0.32 -0.0
10,749 - Ac3H11_720 0.32 -1.0
10,749 - Ac3H11_720 0.32 -0.7
10,749 - Ac3H11_720 0.32 +0.6
11,048 + +0.4
11,049 - +0.5
11,049 - +0.2
11,061 + -0.3
11,062 - +0.1
11,062 - -0.6
11,069 + +0.4
11,070 - +0.2
11,105 + +0.2
11,105 + +0.3
11,106 - -1.1
11,106 - +0.5
11,106 - +0.2
11,149 + +0.2
11,149 + -1.5
11,149 + +0.3
11,149 + +0.8
11,150 - +0.4
11,150 - -0.3
11,504 + +0.7
11,504 + +1.2
11,504 + +0.5
11,504 + +0.3
11,505 - +0.3
11,505 - +0.1
11,505 - +1.8
11,505 - +0.7
11,505 - +0.1
11,505 - +0.2
11,543 + +0.2
11,543 + +0.3
11,543 + -0.7
11,543 + +0.3
11,543 + -0.5
11,544 - -0.2
11,544 - +0.1
11,544 - +0.2
11,544 - -0.6
11,581 - -0.2
11,697 - -0.3
11,697 - -1.1

Or see this region's nucleotide sequence