Experiment: LB, pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_719 and Ac3H11_720 are separated by 164 nucleotides Ac3H11_720 and Ac3H11_721 are separated by 97 nucleotides Ac3H11_721 and Ac3H11_722 are separated by 218 nucleotides
Ac3H11_719 - Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate, at 9,069 to 10,439
_719
Ac3H11_720 - putative inner membrane protein, at 10,604 to 11,050
_720
Ac3H11_721 - Phosphate starvation-inducible protein PsiF, at 11,148 to 11,489
_721
Ac3H11_722 - Arginyl-tRNA synthetase (EC 6.1.1.19), at 11,708 to 13,429
_722
Position (kb)
11
12 Strain fitness (log2 ratio)
-1
0
1
2 at 10.749 kb on - strand, within Ac3H11_720 at 10.749 kb on - strand, within Ac3H11_720 at 10.749 kb on - strand, within Ac3H11_720 at 10.749 kb on - strand, within Ac3H11_720 at 10.749 kb on - strand, within Ac3H11_720 at 10.749 kb on - strand, within Ac3H11_720 at 11.048 kb on + strand at 11.049 kb on - strand at 11.049 kb on - strand at 11.061 kb on + strand at 11.062 kb on - strand at 11.062 kb on - strand at 11.069 kb on + strand at 11.070 kb on - strand at 11.105 kb on + strand at 11.105 kb on + strand at 11.106 kb on - strand at 11.106 kb on - strand at 11.106 kb on - strand at 11.149 kb on + strand at 11.149 kb on + strand at 11.149 kb on + strand at 11.149 kb on + strand at 11.150 kb on - strand at 11.150 kb on - strand at 11.504 kb on + strand at 11.504 kb on + strand at 11.504 kb on + strand at 11.504 kb on + strand at 11.505 kb on - strand at 11.505 kb on - strand at 11.505 kb on - strand at 11.505 kb on - strand at 11.505 kb on - strand at 11.505 kb on - strand at 11.543 kb on + strand at 11.543 kb on + strand at 11.543 kb on + strand at 11.543 kb on + strand at 11.543 kb on + strand at 11.544 kb on - strand at 11.544 kb on - strand at 11.544 kb on - strand at 11.544 kb on - strand at 11.581 kb on - strand at 11.697 kb on - strand at 11.697 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH5 remove 10,749 - Ac3H11_720 0.32 +0.0 10,749 - Ac3H11_720 0.32 +1.2 10,749 - Ac3H11_720 0.32 -0.0 10,749 - Ac3H11_720 0.32 -1.0 10,749 - Ac3H11_720 0.32 -0.7 10,749 - Ac3H11_720 0.32 +0.6 11,048 + +0.4 11,049 - +0.5 11,049 - +0.2 11,061 + -0.3 11,062 - +0.1 11,062 - -0.6 11,069 + +0.4 11,070 - +0.2 11,105 + +0.2 11,105 + +0.3 11,106 - -1.1 11,106 - +0.5 11,106 - +0.2 11,149 + +0.2 11,149 + -1.5 11,149 + +0.3 11,149 + +0.8 11,150 - +0.4 11,150 - -0.3 11,504 + +0.7 11,504 + +1.2 11,504 + +0.5 11,504 + +0.3 11,505 - +0.3 11,505 - +0.1 11,505 - +1.8 11,505 - +0.7 11,505 - +0.1 11,505 - +0.2 11,543 + +0.2 11,543 + +0.3 11,543 + -0.7 11,543 + +0.3 11,543 + -0.5 11,544 - -0.2 11,544 - +0.1 11,544 - +0.2 11,544 - -0.6 11,581 - -0.2 11,697 - -0.3 11,697 - -1.1
Or see this region's nucleotide sequence