Experiment: LB, pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4747 and Ac3H11_4748 are separated by 183 nucleotides Ac3H11_4748 and Ac3H11_4749 are separated by 135 nucleotides Ac3H11_4749 and Ac3H11_4750 are separated by 1 nucleotides Ac3H11_4750 and Ac3H11_4751 overlap by 4 nucleotides
Ac3H11_4747 - 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262), at 49,449 to 50,477
_4747
Ac3H11_4748 - Large-conductance mechanosensitive channel, at 50,661 to 51,092
_4748
Ac3H11_4749 - hypothetical protein, at 51,228 to 51,431
_4749
Ac3H11_4750 - Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2), at 51,433 to 51,843
_4750
Ac3H11_4751 - Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2), at 51,840 to 53,270
_4751
Position (kb)
50
51
52 Strain fitness (log2 ratio)
-2
-1
0
1 at 50.476 kb on - strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.658 kb on + strand at 50.659 kb on - strand at 50.659 kb on - strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 51.796 kb on + strand, within Ac3H11_4750 at 51.796 kb on + strand, within Ac3H11_4750
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH5 remove 50,476 - -0.4 50,507 + -0.2 50,507 + -0.7 50,507 + -0.2 50,507 + +0.8 50,508 - +1.2 50,508 - +0.6 50,508 - +1.5 50,508 - -0.1 50,508 - -0.1 50,508 - +0.1 50,528 + +0.2 50,528 + +0.2 50,528 + +0.2 50,528 + +1.0 50,528 + -0.3 50,528 + +0.1 50,528 + +1.1 50,528 + -0.8 50,528 + -0.3 50,528 + -0.2 50,528 + +0.9 50,529 - -2.0 50,529 - -0.2 50,529 - +0.1 50,529 - +0.0 50,529 - +0.2 50,529 - +0.4 50,529 - +0.7 50,529 - +0.2 50,529 - +0.4 50,529 - -0.5 50,529 - +0.1 50,529 - -0.3 50,529 - -0.4 50,529 - -0.2 50,529 - +0.5 50,658 + +1.4 50,659 - -0.9 50,659 - +0.0 50,662 + -0.8 50,662 + +0.3 50,662 + -0.1 50,662 + -0.1 50,662 + -0.3 50,662 + +0.8 50,662 + -1.1 50,662 + +1.0 50,662 + -0.8 50,662 + -0.2 50,662 + +0.0 50,662 + -0.5 50,662 + -1.0 50,662 + -1.2 50,663 - +0.4 50,663 - -0.4 50,663 - -0.7 50,663 - -0.0 50,663 - +0.1 50,663 - -0.8 50,663 - -0.9 50,663 - -1.3 50,663 - +0.8 50,663 - -1.0 50,663 - -0.4 51,796 + Ac3H11_4750 0.88 +0.2 51,796 + Ac3H11_4750 0.88 -0.6
Or see this region's nucleotide sequence