Experiment: LB, pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2699 and Ac3H11_2700 are separated by 15 nucleotides Ac3H11_2700 and Ac3H11_2701 are separated by 481 nucleotides
Ac3H11_2699 - Transcriptional regulator, MarR family, at 994,908 to 996,443
_2699
Ac3H11_2700 - FIG00575888: hypothetical protein, at 996,459 to 997,400
_2700
Ac3H11_2701 - FIG002188: hypothetical protein, at 997,882 to 998,817
_2701
Position (kb) 996
997
998 Strain fitness (log2 ratio) -2
-1
0
1
2 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.484 kb on + strand, within Ac3H11_2699 at 995.485 kb on - strand, within Ac3H11_2699 at 995.485 kb on - strand, within Ac3H11_2699 at 995.958 kb on + strand, within Ac3H11_2699 at 996.273 kb on - strand, within Ac3H11_2699 at 996.273 kb on - strand, within Ac3H11_2699 at 996.276 kb on - strand, within Ac3H11_2699 at 996.276 kb on - strand, within Ac3H11_2699 at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.439 kb on + strand at 996.440 kb on - strand at 996.440 kb on - strand at 996.440 kb on - strand at 996.440 kb on - strand at 996.527 kb on + strand at 996.528 kb on - strand at 996.583 kb on + strand, within Ac3H11_2700 at 996.584 kb on - strand, within Ac3H11_2700 at 996.584 kb on - strand, within Ac3H11_2700 at 996.584 kb on - strand, within Ac3H11_2700 at 996.584 kb on - strand, within Ac3H11_2700 at 996.603 kb on - strand, within Ac3H11_2700 at 996.632 kb on + strand, within Ac3H11_2700 at 996.633 kb on - strand, within Ac3H11_2700 at 996.872 kb on - strand, within Ac3H11_2700 at 996.960 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.012 kb on + strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.013 kb on - strand, within Ac3H11_2700 at 997.015 kb on + strand, within Ac3H11_2700 at 997.312 kb on + strand at 997.313 kb on - strand at 997.327 kb on - strand at 997.509 kb on + strand at 997.510 kb on - strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.637 kb on + strand at 997.638 kb on - strand at 997.638 kb on - strand at 997.680 kb on + strand at 997.680 kb on + strand at 997.861 kb on + strand at 997.861 kb on + strand at 997.862 kb on - strand at 997.878 kb on + strand at 997.878 kb on + strand at 997.878 kb on + strand at 997.879 kb on - strand at 997.883 kb on + strand at 997.883 kb on + strand at 997.884 kb on - strand at 997.907 kb on - strand at 997.992 kb on - strand, within Ac3H11_2701 at 998.013 kb on - strand, within Ac3H11_2701 at 998.013 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.052 kb on - strand, within Ac3H11_2701 at 998.150 kb on + strand, within Ac3H11_2701 at 998.150 kb on + strand, within Ac3H11_2701 at 998.165 kb on + strand, within Ac3H11_2701 at 998.165 kb on + strand, within Ac3H11_2701 at 998.288 kb on + strand, within Ac3H11_2701 at 998.289 kb on - strand, within Ac3H11_2701 at 998.289 kb on - strand, within Ac3H11_2701 at 998.300 kb on + strand, within Ac3H11_2701 at 998.301 kb on - strand, within Ac3H11_2701 at 998.309 kb on + strand, within Ac3H11_2701 at 998.390 kb on + strand, within Ac3H11_2701 at 998.390 kb on + strand, within Ac3H11_2701 at 998.391 kb on - strand, within Ac3H11_2701
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH5 remove 995,484 + Ac3H11_2699 0.38 +0.5 995,484 + Ac3H11_2699 0.38 +0.1 995,484 + Ac3H11_2699 0.38 +1.3 995,484 + Ac3H11_2699 0.38 +0.8 995,484 + Ac3H11_2699 0.38 +1.0 995,485 - Ac3H11_2699 0.38 +0.6 995,485 - Ac3H11_2699 0.38 -0.4 995,958 + Ac3H11_2699 0.68 -2.7 996,273 - Ac3H11_2699 0.89 +0.1 996,273 - Ac3H11_2699 0.89 -0.2 996,276 - Ac3H11_2699 0.89 -0.2 996,276 - Ac3H11_2699 0.89 -0.3 996,439 + +0.9 996,439 + +0.3 996,439 + +0.8 996,439 + +0.2 996,439 + -0.1 996,439 + -1.2 996,439 + -0.1 996,439 + -0.3 996,439 + -0.2 996,439 + -0.2 996,439 + +0.3 996,439 + +0.9 996,440 - +0.4 996,440 - +0.3 996,440 - +0.6 996,440 - -0.3 996,527 + +0.2 996,528 - +0.1 996,583 + Ac3H11_2700 0.13 -0.2 996,584 - Ac3H11_2700 0.13 -0.8 996,584 - Ac3H11_2700 0.13 +0.1 996,584 - Ac3H11_2700 0.13 -1.8 996,584 - Ac3H11_2700 0.13 +1.2 996,603 - Ac3H11_2700 0.15 -0.6 996,632 + Ac3H11_2700 0.18 -0.0 996,633 - Ac3H11_2700 0.18 -1.4 996,872 - Ac3H11_2700 0.44 +0.7 996,960 + Ac3H11_2700 0.53 -1.0 997,012 + Ac3H11_2700 0.59 +0.1 997,012 + Ac3H11_2700 0.59 +0.4 997,012 + Ac3H11_2700 0.59 -0.6 997,012 + Ac3H11_2700 0.59 -0.6 997,013 - Ac3H11_2700 0.59 -0.3 997,013 - Ac3H11_2700 0.59 -0.0 997,013 - Ac3H11_2700 0.59 +0.6 997,013 - Ac3H11_2700 0.59 -0.4 997,015 + Ac3H11_2700 0.59 +0.1 997,312 + +0.8 997,313 - +0.5 997,327 - -0.4 997,509 + +2.0 997,510 - +0.1 997,637 + -0.9 997,637 + +0.3 997,637 + +0.0 997,637 + +0.4 997,637 + +0.7 997,637 + -0.5 997,638 - -0.5 997,638 - +0.3 997,680 + -0.2 997,680 + +0.0 997,861 + +0.4 997,861 + -2.7 997,862 - +0.0 997,878 + -0.5 997,878 + -0.1 997,878 + -0.4 997,879 - -0.3 997,883 + -0.2 997,883 + +0.8 997,884 - +0.6 997,907 - -0.4 997,992 - Ac3H11_2701 0.12 -1.5 998,013 - Ac3H11_2701 0.14 +0.1 998,013 - Ac3H11_2701 0.14 -1.1 998,052 - Ac3H11_2701 0.18 +0.1 998,052 - Ac3H11_2701 0.18 +0.1 998,052 - Ac3H11_2701 0.18 +0.2 998,150 + Ac3H11_2701 0.29 +0.9 998,150 + Ac3H11_2701 0.29 +0.5 998,165 + Ac3H11_2701 0.30 -0.3 998,165 + Ac3H11_2701 0.30 +0.0 998,288 + Ac3H11_2701 0.43 -0.1 998,289 - Ac3H11_2701 0.43 -0.6 998,289 - Ac3H11_2701 0.43 -0.2 998,300 + Ac3H11_2701 0.45 +0.2 998,301 - Ac3H11_2701 0.45 +1.5 998,309 + Ac3H11_2701 0.46 +0.7 998,390 + Ac3H11_2701 0.54 -0.4 998,390 + Ac3H11_2701 0.54 -0.2 998,391 - Ac3H11_2701 0.54 -0.1
Or see this region's nucleotide sequence