Experiment: LB, pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2482 and Ac3H11_2483 overlap by 1 nucleotides Ac3H11_2483 and Ac3H11_2484 overlap by 1 nucleotides Ac3H11_2484 and Ac3H11_2485 are separated by 44 nucleotides
Ac3H11_2482 - Probable HesA/MoeB/ThiF family protein, at 749,383 to 750,231
_2482
Ac3H11_2483 - TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain, at 750,231 to 751,022
_2483
Ac3H11_2484 - 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor, at 751,022 to 751,564
_2484
Ac3H11_2485 - tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins, at 751,609 to 752,928
_2485
Position (kb) 751
752 Strain fitness (log2 ratio) -2
-1
0
1 at 750.140 kb on + strand, within Ac3H11_2482 at 750.140 kb on + strand, within Ac3H11_2482 at 750.140 kb on + strand, within Ac3H11_2482 at 750.140 kb on + strand, within Ac3H11_2482 at 750.141 kb on - strand, within Ac3H11_2482 at 750.232 kb on + strand at 750.232 kb on + strand at 750.233 kb on - strand at 750.233 kb on - strand at 750.233 kb on - strand at 750.233 kb on - strand at 750.233 kb on - strand at 750.233 kb on - strand at 750.423 kb on - strand, within Ac3H11_2483 at 750.439 kb on + strand, within Ac3H11_2483 at 750.439 kb on + strand, within Ac3H11_2483 at 750.440 kb on - strand, within Ac3H11_2483 at 750.440 kb on - strand, within Ac3H11_2483 at 750.440 kb on - strand, within Ac3H11_2483 at 751.029 kb on + strand at 751.029 kb on + strand at 751.030 kb on - strand at 751.030 kb on - strand at 751.589 kb on - strand at 751.589 kb on - strand at 751.589 kb on - strand at 751.605 kb on - strand at 751.605 kb on - strand at 751.605 kb on - strand at 751.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH5 remove 750,140 + Ac3H11_2482 0.89 +0.2 750,140 + Ac3H11_2482 0.89 +0.0 750,140 + Ac3H11_2482 0.89 +0.2 750,140 + Ac3H11_2482 0.89 +0.8 750,141 - Ac3H11_2482 0.89 +0.9 750,232 + -0.3 750,232 + +1.1 750,233 - -0.1 750,233 - +0.2 750,233 - +0.3 750,233 - +0.7 750,233 - -0.1 750,233 - -1.2 750,423 - Ac3H11_2483 0.24 -0.9 750,439 + Ac3H11_2483 0.26 -2.2 750,439 + Ac3H11_2483 0.26 -0.6 750,440 - Ac3H11_2483 0.26 -1.6 750,440 - Ac3H11_2483 0.26 -0.2 750,440 - Ac3H11_2483 0.26 -2.7 751,029 + -0.9 751,029 + -2.4 751,030 - +1.1 751,030 - -1.1 751,589 - -0.1 751,589 - -0.4 751,589 - +0.1 751,605 - +0.4 751,605 - -0.4 751,605 - -0.1 751,605 - -0.1
Or see this region's nucleotide sequence