Experiment: syringaldehyde 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27945 and AO353_27950 overlap by 4 nucleotides AO353_27950 and AO353_27955 are separated by 12 nucleotides
AO353_27945: AO353_27945 - acetyl-CoA acetyltransferase, at 6,096,389 to 6,097,570
_27945
AO353_27950: AO353_27950 - hypothetical protein, at 6,097,567 to 6,097,878
_27950
AO353_27955: AO353_27955 - tyrosyl-trna synthetase, at 6,097,891 to 6,098,427
_27955
Position (kb)
6097
6098 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6096.755 kb on + strand, within AO353_27945 at 6096.755 kb on + strand, within AO353_27945 at 6096.755 kb on + strand, within AO353_27945 at 6096.755 kb on + strand, within AO353_27945 at 6096.756 kb on - strand, within AO353_27945 at 6096.756 kb on - strand, within AO353_27945 at 6096.756 kb on - strand, within AO353_27945 at 6096.756 kb on - strand, within AO353_27945 at 6096.852 kb on - strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.891 kb on - strand, within AO353_27945 at 6096.891 kb on - strand, within AO353_27945 at 6096.891 kb on - strand, within AO353_27945 at 6097.439 kb on - strand, within AO353_27945 at 6097.568 kb on + strand at 6097.705 kb on + strand, within AO353_27950 at 6097.777 kb on - strand, within AO353_27950 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.155 kb on - strand, within AO353_27955 at 6098.155 kb on - strand, within AO353_27955 at 6098.155 kb on - strand, within AO353_27955 at 6098.210 kb on + strand, within AO353_27955 at 6098.210 kb on + strand, within AO353_27955 at 6098.210 kb on + strand, within AO353_27955 at 6098.210 kb on + strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.220 kb on + strand, within AO353_27955 at 6098.221 kb on - strand, within AO353_27955 at 6098.455 kb on + strand at 6098.455 kb on + strand at 6098.455 kb on + strand at 6098.455 kb on + strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.525 kb on - strand at 6098.538 kb on + strand at 6098.551 kb on + strand at 6098.551 kb on + strand at 6098.551 kb on + strand at 6098.551 kb on + strand at 6098.552 kb on - strand at 6098.552 kb on - strand at 6098.552 kb on - strand at 6098.578 kb on + strand at 6098.578 kb on + strand at 6098.579 kb on - strand at 6098.579 kb on - strand at 6098.579 kb on - strand at 6098.630 kb on - strand at 6098.637 kb on - strand at 6098.640 kb on - strand at 6098.640 kb on - strand at 6098.640 kb on - strand at 6098.647 kb on + strand at 6098.647 kb on + strand at 6098.647 kb on + strand at 6098.647 kb on + strand at 6098.648 kb on - strand at 6098.648 kb on - strand at 6098.648 kb on - strand at 6098.689 kb on + strand at 6098.690 kb on - strand at 6098.690 kb on - strand at 6098.740 kb on + strand at 6098.741 kb on - strand at 6098.741 kb on - strand at 6098.746 kb on + strand at 6098.747 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 5 mM remove 6,096,755 + AO353_27945 0.31 +0.2 6,096,755 + AO353_27945 0.31 +1.6 6,096,755 + AO353_27945 0.31 +1.6 6,096,755 + AO353_27945 0.31 +1.5 6,096,756 - AO353_27945 0.31 +1.6 6,096,756 - AO353_27945 0.31 -2.7 6,096,756 - AO353_27945 0.31 +0.8 6,096,756 - AO353_27945 0.31 -0.2 6,096,852 - AO353_27945 0.39 -1.7 6,096,890 + AO353_27945 0.42 +0.5 6,096,890 + AO353_27945 0.42 -0.4 6,096,890 + AO353_27945 0.42 -0.4 6,096,890 + AO353_27945 0.42 +1.0 6,096,890 + AO353_27945 0.42 -0.1 6,096,890 + AO353_27945 0.42 -0.6 6,096,891 - AO353_27945 0.42 +1.8 6,096,891 - AO353_27945 0.42 -0.7 6,096,891 - AO353_27945 0.42 +0.8 6,097,439 - AO353_27945 0.89 -0.6 6,097,568 + -0.4 6,097,705 + AO353_27950 0.44 -1.2 6,097,777 - AO353_27950 0.67 -1.5 6,098,154 + AO353_27955 0.49 +1.2 6,098,154 + AO353_27955 0.49 +0.2 6,098,154 + AO353_27955 0.49 -0.2 6,098,154 + AO353_27955 0.49 +1.4 6,098,154 + AO353_27955 0.49 -0.4 6,098,154 + AO353_27955 0.49 +0.1 6,098,154 + AO353_27955 0.49 +0.5 6,098,154 + AO353_27955 0.49 +0.2 6,098,154 + AO353_27955 0.49 +0.6 6,098,154 + AO353_27955 0.49 -0.1 6,098,154 + AO353_27955 0.49 -2.2 6,098,154 + AO353_27955 0.49 +0.0 6,098,155 - AO353_27955 0.49 -1.2 6,098,155 - AO353_27955 0.49 +0.1 6,098,155 - AO353_27955 0.49 -0.7 6,098,210 + AO353_27955 0.59 +0.6 6,098,210 + AO353_27955 0.59 +0.6 6,098,210 + AO353_27955 0.59 +0.2 6,098,210 + AO353_27955 0.59 -1.4 6,098,211 - AO353_27955 0.60 -1.7 6,098,211 - AO353_27955 0.60 -0.2 6,098,211 - AO353_27955 0.60 -0.4 6,098,211 - AO353_27955 0.60 +1.0 6,098,211 - AO353_27955 0.60 -0.0 6,098,220 + AO353_27955 0.61 +0.2 6,098,221 - AO353_27955 0.61 -0.5 6,098,455 + -0.9 6,098,455 + -0.4 6,098,455 + +0.6 6,098,455 + -1.2 6,098,456 - +1.2 6,098,456 - -0.4 6,098,456 - +0.6 6,098,456 - +0.6 6,098,456 - +0.4 6,098,456 - -0.9 6,098,456 - +0.6 6,098,525 - -0.5 6,098,538 + +0.4 6,098,551 + -0.1 6,098,551 + -1.5 6,098,551 + +0.3 6,098,551 + +1.2 6,098,552 - +0.1 6,098,552 - +0.1 6,098,552 - +2.0 6,098,578 + -1.1 6,098,578 + -1.5 6,098,579 - +0.1 6,098,579 - +0.4 6,098,579 - +1.6 6,098,630 - -2.5 6,098,637 - +0.6 6,098,640 - -0.9 6,098,640 - +0.4 6,098,640 - +0.6 6,098,647 + -0.1 6,098,647 + -2.2 6,098,647 + -0.5 6,098,647 + -1.2 6,098,648 - +1.6 6,098,648 - +1.2 6,098,648 - +0.7 6,098,689 + -0.2 6,098,690 - -0.5 6,098,690 - +0.4 6,098,740 + +0.6 6,098,741 - -1.2 6,098,741 - +0.1 6,098,746 + +0.2 6,098,747 - -1.2
Or see this region's nucleotide sequence