Experiment: syringaldehyde 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26200 and AO353_26205 are separated by 102 nucleotides AO353_26205 and AO353_26210 are separated by 81 nucleotides AO353_26210 and AO353_26215 overlap by 4 nucleotides AO353_26215 and AO353_26220 overlap by 4 nucleotides
AO353_26200: AO353_26200 - phage tail protein, at 5,764,117 to 5,764,770
_26200
AO353_26205: AO353_26205 - hypothetical protein, at 5,764,873 to 5,765,535
_26205
AO353_26210: AO353_26210 - hypothetical protein, at 5,765,617 to 5,766,036
_26210
AO353_26215: AO353_26215 - hypothetical protein, at 5,766,033 to 5,766,686
_26215
AO353_26220: AO353_26220 - hypothetical protein, at 5,766,683 to 5,767,054
_26220
Position (kb)
5765
5766
5767 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5764.698 kb on + strand, within AO353_26200 at 5764.698 kb on + strand, within AO353_26200 at 5764.698 kb on + strand, within AO353_26200 at 5764.699 kb on - strand, within AO353_26200 at 5764.699 kb on - strand, within AO353_26200 at 5764.699 kb on - strand, within AO353_26200 at 5764.699 kb on - strand, within AO353_26200 at 5764.699 kb on - strand, within AO353_26200 at 5764.719 kb on - strand at 5764.850 kb on - strand at 5765.046 kb on + strand, within AO353_26205 at 5765.046 kb on + strand, within AO353_26205 at 5765.046 kb on + strand, within AO353_26205 at 5765.047 kb on - strand, within AO353_26205 at 5765.169 kb on - strand, within AO353_26205 at 5765.169 kb on - strand, within AO353_26205 at 5765.169 kb on - strand, within AO353_26205 at 5765.171 kb on + strand, within AO353_26205 at 5765.171 kb on + strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.172 kb on - strand, within AO353_26205 at 5765.182 kb on + strand, within AO353_26205 at 5765.182 kb on + strand, within AO353_26205 at 5765.182 kb on + strand, within AO353_26205 at 5765.182 kb on + strand, within AO353_26205 at 5765.182 kb on + strand, within AO353_26205 at 5765.182 kb on + strand, within AO353_26205 at 5765.182 kb on + strand, within AO353_26205 at 5765.183 kb on - strand, within AO353_26205 at 5765.183 kb on - strand, within AO353_26205 at 5765.183 kb on - strand, within AO353_26205 at 5765.183 kb on - strand, within AO353_26205 at 5765.252 kb on + strand, within AO353_26205 at 5765.252 kb on + strand, within AO353_26205 at 5765.252 kb on + strand, within AO353_26205 at 5765.252 kb on + strand, within AO353_26205 at 5765.252 kb on + strand, within AO353_26205 at 5765.252 kb on + strand, within AO353_26205 at 5765.252 kb on + strand, within AO353_26205 at 5765.252 kb on + strand, within AO353_26205 at 5765.253 kb on - strand, within AO353_26205 at 5765.253 kb on - strand, within AO353_26205 at 5765.443 kb on + strand, within AO353_26205 at 5765.443 kb on + strand, within AO353_26205 at 5765.443 kb on + strand, within AO353_26205 at 5765.443 kb on + strand, within AO353_26205 at 5765.443 kb on + strand, within AO353_26205 at 5765.443 kb on + strand, within AO353_26205 at 5765.443 kb on + strand, within AO353_26205 at 5765.444 kb on - strand, within AO353_26205 at 5765.444 kb on - strand, within AO353_26205 at 5765.444 kb on - strand, within AO353_26205 at 5765.444 kb on - strand, within AO353_26205 at 5765.450 kb on + strand, within AO353_26205 at 5765.451 kb on - strand, within AO353_26205 at 5765.455 kb on + strand, within AO353_26205 at 5765.467 kb on + strand, within AO353_26205 at 5765.467 kb on + strand, within AO353_26205 at 5765.467 kb on + strand, within AO353_26205 at 5765.468 kb on - strand, within AO353_26205 at 5765.512 kb on + strand at 5765.513 kb on - strand at 5765.513 kb on - strand at 5765.513 kb on - strand at 5765.513 kb on - strand at 5765.513 kb on - strand at 5765.537 kb on + strand at 5765.564 kb on + strand at 5765.564 kb on + strand at 5765.618 kb on + strand at 5765.618 kb on + strand at 5765.619 kb on - strand at 5765.619 kb on - strand at 5765.619 kb on - strand at 5765.619 kb on - strand at 5765.620 kb on + strand at 5765.620 kb on + strand at 5765.620 kb on + strand at 5765.620 kb on + strand at 5765.620 kb on + strand at 5765.620 kb on + strand at 5765.639 kb on + strand at 5765.640 kb on - strand at 5765.640 kb on - strand at 5765.640 kb on - strand at 5765.661 kb on + strand, within AO353_26210 at 5765.847 kb on - strand, within AO353_26210 at 5765.847 kb on - strand, within AO353_26210 at 5765.847 kb on - strand, within AO353_26210 at 5765.912 kb on + strand, within AO353_26210 at 5765.912 kb on + strand, within AO353_26210 at 5765.912 kb on + strand, within AO353_26210 at 5765.912 kb on + strand, within AO353_26210 at 5765.912 kb on + strand, within AO353_26210 at 5765.913 kb on - strand, within AO353_26210 at 5765.913 kb on - strand, within AO353_26210 at 5765.913 kb on - strand, within AO353_26210 at 5765.913 kb on - strand, within AO353_26210 at 5765.935 kb on - strand, within AO353_26210 at 5765.935 kb on - strand, within AO353_26210 at 5765.935 kb on - strand, within AO353_26210 at 5765.951 kb on + strand, within AO353_26210 at 5765.951 kb on + strand, within AO353_26210 at 5766.010 kb on + strand at 5766.010 kb on + strand at 5766.010 kb on + strand at 5766.010 kb on + strand at 5766.010 kb on + strand at 5766.010 kb on + strand at 5766.010 kb on + strand at 5766.010 kb on + strand at 5766.011 kb on - strand at 5766.011 kb on - strand at 5766.011 kb on - strand at 5766.036 kb on + strand at 5766.036 kb on + strand at 5766.036 kb on + strand at 5766.036 kb on + strand at 5766.036 kb on + strand at 5766.037 kb on - strand at 5766.037 kb on - strand at 5766.037 kb on - strand at 5766.130 kb on + strand, within AO353_26215 at 5766.169 kb on + strand, within AO353_26215 at 5766.169 kb on + strand, within AO353_26215 at 5766.170 kb on - strand, within AO353_26215 at 5766.170 kb on - strand, within AO353_26215 at 5766.272 kb on + strand, within AO353_26215 at 5766.316 kb on + strand, within AO353_26215 at 5766.388 kb on + strand, within AO353_26215 at 5766.388 kb on + strand, within AO353_26215 at 5766.389 kb on - strand, within AO353_26215 at 5766.389 kb on - strand, within AO353_26215 at 5766.389 kb on - strand, within AO353_26215 at 5766.452 kb on + strand, within AO353_26215 at 5766.453 kb on - strand, within AO353_26215 at 5766.478 kb on + strand, within AO353_26215 at 5766.478 kb on + strand, within AO353_26215 at 5766.479 kb on - strand, within AO353_26215 at 5766.563 kb on + strand, within AO353_26215 at 5766.564 kb on - strand, within AO353_26215 at 5766.676 kb on + strand at 5766.677 kb on - strand at 5766.698 kb on + strand at 5766.698 kb on + strand at 5766.698 kb on + strand at 5766.698 kb on + strand at 5766.698 kb on + strand at 5766.699 kb on - strand at 5766.740 kb on + strand at 5766.740 kb on + strand, within AO353_26220 at 5766.740 kb on + strand, within AO353_26220 at 5766.741 kb on - strand, within AO353_26220 at 5766.946 kb on + strand, within AO353_26220 at 5766.946 kb on + strand, within AO353_26220 at 5766.957 kb on + strand, within AO353_26220 at 5766.958 kb on - strand, within AO353_26220 at 5766.958 kb on - strand, within AO353_26220
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 5 mM remove 5,764,698 + AO353_26200 0.89 -0.8 5,764,698 + AO353_26200 0.89 +0.4 5,764,698 + AO353_26200 0.89 +0.8 5,764,699 - AO353_26200 0.89 +1.1 5,764,699 - AO353_26200 0.89 -0.0 5,764,699 - AO353_26200 0.89 -1.2 5,764,699 - AO353_26200 0.89 -0.4 5,764,699 - AO353_26200 0.89 -1.2 5,764,719 - +0.1 5,764,850 - -2.0 5,765,046 + AO353_26205 0.26 +0.2 5,765,046 + AO353_26205 0.26 +1.2 5,765,046 + AO353_26205 0.26 +0.6 5,765,047 - AO353_26205 0.26 +0.6 5,765,169 - AO353_26205 0.45 +0.1 5,765,169 - AO353_26205 0.45 -0.4 5,765,169 - AO353_26205 0.45 +0.9 5,765,171 + AO353_26205 0.45 -1.1 5,765,171 + AO353_26205 0.45 +0.2 5,765,172 - AO353_26205 0.45 -0.3 5,765,172 - AO353_26205 0.45 +0.7 5,765,172 - AO353_26205 0.45 +0.6 5,765,172 - AO353_26205 0.45 +1.6 5,765,172 - AO353_26205 0.45 -0.1 5,765,172 - AO353_26205 0.45 -0.8 5,765,172 - AO353_26205 0.45 -0.1 5,765,172 - AO353_26205 0.45 -0.4 5,765,172 - AO353_26205 0.45 +0.3 5,765,182 + AO353_26205 0.47 +0.6 5,765,182 + AO353_26205 0.47 +0.5 5,765,182 + AO353_26205 0.47 -1.2 5,765,182 + AO353_26205 0.47 +1.6 5,765,182 + AO353_26205 0.47 -0.0 5,765,182 + AO353_26205 0.47 +0.1 5,765,182 + AO353_26205 0.47 -1.0 5,765,183 - AO353_26205 0.47 -2.9 5,765,183 - AO353_26205 0.47 -0.0 5,765,183 - AO353_26205 0.47 +0.3 5,765,183 - AO353_26205 0.47 -0.4 5,765,252 + AO353_26205 0.57 -0.0 5,765,252 + AO353_26205 0.57 -0.5 5,765,252 + AO353_26205 0.57 -0.0 5,765,252 + AO353_26205 0.57 +0.2 5,765,252 + AO353_26205 0.57 -1.7 5,765,252 + AO353_26205 0.57 -0.4 5,765,252 + AO353_26205 0.57 -0.9 5,765,252 + AO353_26205 0.57 -2.2 5,765,253 - AO353_26205 0.57 -0.4 5,765,253 - AO353_26205 0.57 +0.6 5,765,443 + AO353_26205 0.86 -0.2 5,765,443 + AO353_26205 0.86 +0.2 5,765,443 + AO353_26205 0.86 -0.4 5,765,443 + AO353_26205 0.86 +0.1 5,765,443 + AO353_26205 0.86 +1.6 5,765,443 + AO353_26205 0.86 +0.4 5,765,443 + AO353_26205 0.86 -0.1 5,765,444 - AO353_26205 0.86 -0.3 5,765,444 - AO353_26205 0.86 +1.3 5,765,444 - AO353_26205 0.86 +1.2 5,765,444 - AO353_26205 0.86 -0.4 5,765,450 + AO353_26205 0.87 -2.0 5,765,451 - AO353_26205 0.87 -1.5 5,765,455 + AO353_26205 0.88 +0.9 5,765,467 + AO353_26205 0.90 -0.4 5,765,467 + AO353_26205 0.90 -0.8 5,765,467 + AO353_26205 0.90 +0.3 5,765,468 - AO353_26205 0.90 +0.3 5,765,512 + +0.6 5,765,513 - -0.6 5,765,513 - +0.1 5,765,513 - +0.5 5,765,513 - +1.8 5,765,513 - -0.1 5,765,537 + -0.6 5,765,564 + -0.6 5,765,564 + +0.3 5,765,618 + -1.4 5,765,618 + -0.2 5,765,619 - -0.7 5,765,619 - -0.4 5,765,619 - -1.3 5,765,619 - -0.2 5,765,620 + +0.6 5,765,620 + +1.1 5,765,620 + +1.6 5,765,620 + -2.0 5,765,620 + -0.7 5,765,620 + +0.8 5,765,639 + +0.3 5,765,640 - +0.6 5,765,640 - -0.7 5,765,640 - -1.1 5,765,661 + AO353_26210 0.10 -0.4 5,765,847 - AO353_26210 0.55 -0.5 5,765,847 - AO353_26210 0.55 +2.0 5,765,847 - AO353_26210 0.55 -0.3 5,765,912 + AO353_26210 0.70 +0.6 5,765,912 + AO353_26210 0.70 +0.2 5,765,912 + AO353_26210 0.70 +0.6 5,765,912 + AO353_26210 0.70 -1.6 5,765,912 + AO353_26210 0.70 -1.7 5,765,913 - AO353_26210 0.70 -1.0 5,765,913 - AO353_26210 0.70 +1.2 5,765,913 - AO353_26210 0.70 -1.0 5,765,913 - AO353_26210 0.70 -1.4 5,765,935 - AO353_26210 0.76 -1.7 5,765,935 - AO353_26210 0.76 -1.4 5,765,935 - AO353_26210 0.76 -2.2 5,765,951 + AO353_26210 0.80 -0.0 5,765,951 + AO353_26210 0.80 +1.8 5,766,010 + -0.2 5,766,010 + -0.9 5,766,010 + -1.4 5,766,010 + -0.2 5,766,010 + -1.7 5,766,010 + -0.2 5,766,010 + +0.6 5,766,010 + +1.9 5,766,011 - -2.0 5,766,011 - +0.6 5,766,011 - -0.3 5,766,036 + +2.7 5,766,036 + -0.0 5,766,036 + +1.2 5,766,036 + -0.0 5,766,036 + -0.0 5,766,037 - -0.3 5,766,037 - -0.7 5,766,037 - +0.6 5,766,130 + AO353_26215 0.15 -0.8 5,766,169 + AO353_26215 0.21 +0.8 5,766,169 + AO353_26215 0.21 -1.6 5,766,170 - AO353_26215 0.21 -0.4 5,766,170 - AO353_26215 0.21 -1.3 5,766,272 + AO353_26215 0.37 +0.7 5,766,316 + AO353_26215 0.43 +1.2 5,766,388 + AO353_26215 0.54 -0.7 5,766,388 + AO353_26215 0.54 +0.6 5,766,389 - AO353_26215 0.54 -1.0 5,766,389 - AO353_26215 0.54 +0.3 5,766,389 - AO353_26215 0.54 -1.2 5,766,452 + AO353_26215 0.64 +1.3 5,766,453 - AO353_26215 0.64 -0.2 5,766,478 + AO353_26215 0.68 -0.3 5,766,478 + AO353_26215 0.68 +0.6 5,766,479 - AO353_26215 0.68 -0.4 5,766,563 + AO353_26215 0.81 +0.4 5,766,564 - AO353_26215 0.81 +1.6 5,766,676 + +0.6 5,766,677 - +0.8 5,766,698 + +0.6 5,766,698 + -0.1 5,766,698 + -0.6 5,766,698 + -0.4 5,766,698 + +0.4 5,766,699 - +0.9 5,766,740 + -1.0 5,766,740 + AO353_26220 0.15 -0.5 5,766,740 + AO353_26220 0.15 -0.8 5,766,741 - AO353_26220 0.16 -0.7 5,766,946 + AO353_26220 0.71 -0.8 5,766,946 + AO353_26220 0.71 +0.6 5,766,957 + AO353_26220 0.74 -0.2 5,766,958 - AO353_26220 0.74 -0.4 5,766,958 - AO353_26220 0.74 -1.4
Or see this region's nucleotide sequence