Experiment: syringaldehyde 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24055 and AO353_24060 are separated by 503 nucleotides AO353_24060 and AO353_24065 are separated by 198 nucleotides
AO353_24055: AO353_24055 - ligand-gated channel protein, at 5,290,700 to 5,292,970
_24055
AO353_24060: AO353_24060 - AcrR family transcriptional regulator, at 5,293,474 to 5,294,100
_24060
AO353_24065: AO353_24065 - Long-chain fatty acid transport protein, at 5,294,299 to 5,295,570
_24065
Position (kb)
5293
5294
5295 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5292.581 kb on + strand, within AO353_24055 at 5292.582 kb on - strand, within AO353_24055 at 5292.725 kb on + strand, within AO353_24055 at 5292.725 kb on + strand, within AO353_24055 at 5292.725 kb on + strand, within AO353_24055 at 5292.725 kb on + strand, within AO353_24055 at 5292.726 kb on - strand, within AO353_24055 at 5292.726 kb on - strand, within AO353_24055 at 5292.726 kb on - strand, within AO353_24055 at 5292.726 kb on - strand, within AO353_24055 at 5292.726 kb on - strand, within AO353_24055 at 5292.726 kb on - strand, within AO353_24055 at 5292.729 kb on + strand, within AO353_24055 at 5292.729 kb on + strand, within AO353_24055 at 5292.729 kb on + strand, within AO353_24055 at 5292.729 kb on + strand, within AO353_24055 at 5292.730 kb on - strand, within AO353_24055 at 5292.730 kb on - strand, within AO353_24055 at 5292.730 kb on - strand, within AO353_24055 at 5292.740 kb on + strand, within AO353_24055 at 5292.776 kb on + strand at 5292.776 kb on + strand at 5292.849 kb on + strand at 5292.849 kb on + strand at 5292.849 kb on + strand at 5292.849 kb on + strand at 5292.850 kb on - strand at 5292.850 kb on - strand at 5292.850 kb on - strand at 5292.850 kb on - strand at 5292.850 kb on - strand at 5292.850 kb on - strand at 5292.873 kb on - strand at 5292.873 kb on - strand at 5292.873 kb on - strand at 5292.887 kb on + strand at 5292.887 kb on + strand at 5292.888 kb on - strand at 5292.888 kb on - strand at 5292.888 kb on - strand at 5292.937 kb on + strand at 5292.998 kb on - strand at 5292.998 kb on - strand at 5292.998 kb on - strand at 5292.998 kb on - strand at 5292.998 kb on - strand at 5292.998 kb on - strand at 5293.057 kb on + strand at 5293.057 kb on + strand at 5293.162 kb on + strand at 5293.162 kb on + strand at 5293.163 kb on - strand at 5293.164 kb on + strand at 5293.164 kb on + strand at 5293.165 kb on - strand at 5293.165 kb on - strand at 5293.165 kb on - strand at 5293.219 kb on + strand at 5293.219 kb on + strand at 5293.219 kb on + strand at 5293.249 kb on - strand at 5293.249 kb on - strand at 5293.352 kb on + strand at 5293.353 kb on - strand at 5293.353 kb on - strand at 5293.363 kb on + strand at 5293.376 kb on + strand at 5293.377 kb on - strand at 5293.380 kb on + strand at 5293.380 kb on + strand at 5293.380 kb on + strand at 5293.381 kb on - strand at 5293.385 kb on + strand at 5293.385 kb on + strand at 5293.386 kb on - strand at 5293.386 kb on - strand at 5293.386 kb on - strand at 5293.386 kb on - strand at 5293.391 kb on + strand at 5293.420 kb on - strand at 5293.421 kb on + strand at 5293.462 kb on + strand at 5293.463 kb on - strand at 5293.463 kb on - strand at 5293.640 kb on - strand, within AO353_24060 at 5293.640 kb on - strand, within AO353_24060 at 5293.640 kb on - strand, within AO353_24060 at 5293.640 kb on - strand, within AO353_24060 at 5293.645 kb on + strand, within AO353_24060 at 5293.645 kb on + strand at 5293.646 kb on - strand, within AO353_24060 at 5293.646 kb on - strand, within AO353_24060 at 5293.737 kb on + strand, within AO353_24060 at 5293.737 kb on + strand, within AO353_24060 at 5293.737 kb on + strand, within AO353_24060 at 5293.737 kb on + strand, within AO353_24060 at 5293.738 kb on - strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.739 kb on + strand, within AO353_24060 at 5293.740 kb on - strand, within AO353_24060 at 5293.740 kb on - strand, within AO353_24060 at 5293.740 kb on - strand, within AO353_24060 at 5293.740 kb on - strand, within AO353_24060 at 5293.740 kb on - strand, within AO353_24060 at 5293.815 kb on + strand, within AO353_24060 at 5293.832 kb on - strand, within AO353_24060 at 5293.872 kb on + strand, within AO353_24060 at 5293.882 kb on + strand, within AO353_24060 at 5293.882 kb on + strand, within AO353_24060 at 5293.882 kb on + strand, within AO353_24060 at 5293.883 kb on - strand, within AO353_24060 at 5293.883 kb on - strand, within AO353_24060 at 5293.883 kb on - strand, within AO353_24060 at 5293.883 kb on - strand, within AO353_24060 at 5293.976 kb on + strand, within AO353_24060 at 5293.976 kb on + strand, within AO353_24060 at 5293.976 kb on + strand, within AO353_24060 at 5293.977 kb on - strand, within AO353_24060 at 5293.985 kb on + strand, within AO353_24060 at 5293.985 kb on + strand, within AO353_24060 at 5293.986 kb on - strand, within AO353_24060 at 5293.986 kb on - strand, within AO353_24060 at 5294.018 kb on + strand, within AO353_24060 at 5294.018 kb on + strand, within AO353_24060 at 5294.018 kb on + strand, within AO353_24060 at 5294.029 kb on + strand, within AO353_24060 at 5294.041 kb on + strand at 5294.041 kb on + strand at 5294.042 kb on - strand at 5294.117 kb on + strand at 5294.117 kb on + strand at 5294.117 kb on + strand at 5294.118 kb on - strand at 5294.118 kb on - strand at 5294.118 kb on - strand at 5294.133 kb on - strand at 5294.199 kb on + strand at 5294.199 kb on + strand at 5294.261 kb on + strand at 5294.261 kb on + strand at 5294.261 kb on + strand at 5294.262 kb on - strand at 5294.262 kb on - strand at 5294.262 kb on - strand at 5294.287 kb on - strand at 5294.476 kb on - strand, within AO353_24065 at 5294.540 kb on + strand, within AO353_24065 at 5294.540 kb on + strand, within AO353_24065 at 5294.541 kb on - strand, within AO353_24065 at 5294.541 kb on - strand, within AO353_24065 at 5294.556 kb on + strand, within AO353_24065 at 5294.557 kb on - strand, within AO353_24065 at 5294.608 kb on - strand, within AO353_24065 at 5294.608 kb on - strand, within AO353_24065 at 5294.614 kb on + strand, within AO353_24065 at 5294.614 kb on + strand, within AO353_24065 at 5294.615 kb on - strand, within AO353_24065 at 5294.617 kb on + strand, within AO353_24065 at 5294.617 kb on + strand, within AO353_24065 at 5294.617 kb on + strand, within AO353_24065 at 5294.618 kb on - strand, within AO353_24065 at 5294.618 kb on - strand, within AO353_24065 at 5294.618 kb on - strand, within AO353_24065 at 5294.618 kb on - strand, within AO353_24065 at 5294.618 kb on - strand, within AO353_24065 at 5294.618 kb on - strand, within AO353_24065 at 5294.662 kb on + strand, within AO353_24065 at 5294.662 kb on + strand at 5294.663 kb on - strand, within AO353_24065 at 5294.663 kb on - strand, within AO353_24065 at 5294.663 kb on - strand, within AO353_24065 at 5294.666 kb on + strand, within AO353_24065 at 5294.666 kb on + strand, within AO353_24065 at 5294.666 kb on + strand, within AO353_24065 at 5294.667 kb on - strand, within AO353_24065 at 5294.717 kb on - strand, within AO353_24065 at 5294.746 kb on - strand, within AO353_24065 at 5294.746 kb on - strand, within AO353_24065 at 5294.767 kb on + strand, within AO353_24065 at 5294.767 kb on + strand, within AO353_24065 at 5294.767 kb on + strand, within AO353_24065 at 5294.767 kb on + strand, within AO353_24065 at 5294.767 kb on + strand, within AO353_24065 at 5294.767 kb on + strand at 5294.768 kb on - strand, within AO353_24065 at 5294.768 kb on - strand, within AO353_24065 at 5294.768 kb on - strand, within AO353_24065 at 5294.808 kb on + strand, within AO353_24065 at 5294.808 kb on + strand, within AO353_24065 at 5294.808 kb on + strand, within AO353_24065 at 5294.968 kb on + strand, within AO353_24065 at 5294.968 kb on + strand, within AO353_24065 at 5294.968 kb on + strand, within AO353_24065 at 5294.968 kb on + strand, within AO353_24065 at 5294.968 kb on + strand, within AO353_24065 at 5294.969 kb on - strand, within AO353_24065 at 5294.969 kb on - strand, within AO353_24065 at 5294.969 kb on - strand, within AO353_24065 at 5294.987 kb on - strand, within AO353_24065 at 5295.027 kb on + strand, within AO353_24065 at 5295.027 kb on + strand, within AO353_24065 at 5295.055 kb on + strand, within AO353_24065 at 5295.055 kb on + strand, within AO353_24065 at 5295.055 kb on + strand, within AO353_24065 at 5295.056 kb on - strand, within AO353_24065 at 5295.056 kb on - strand, within AO353_24065
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 5 mM remove 5,292,581 + AO353_24055 0.83 -0.2 5,292,582 - AO353_24055 0.83 -1.0 5,292,725 + AO353_24055 0.89 -0.4 5,292,725 + AO353_24055 0.89 -0.4 5,292,725 + AO353_24055 0.89 -0.2 5,292,725 + AO353_24055 0.89 +1.2 5,292,726 - AO353_24055 0.89 +0.2 5,292,726 - AO353_24055 0.89 -0.7 5,292,726 - AO353_24055 0.89 -0.1 5,292,726 - AO353_24055 0.89 +1.6 5,292,726 - AO353_24055 0.89 +1.6 5,292,726 - AO353_24055 0.89 +0.0 5,292,729 + AO353_24055 0.89 +1.2 5,292,729 + AO353_24055 0.89 -0.1 5,292,729 + AO353_24055 0.89 -0.4 5,292,729 + AO353_24055 0.89 +1.2 5,292,730 - AO353_24055 0.89 +0.1 5,292,730 - AO353_24055 0.89 +0.4 5,292,730 - AO353_24055 0.89 +1.2 5,292,740 + AO353_24055 0.90 +0.3 5,292,776 + +0.2 5,292,776 + +0.6 5,292,849 + +0.6 5,292,849 + +0.6 5,292,849 + -1.6 5,292,849 + -0.0 5,292,850 - -0.7 5,292,850 - -1.0 5,292,850 - -0.5 5,292,850 - -0.1 5,292,850 - +0.6 5,292,850 - -0.8 5,292,873 - -0.0 5,292,873 - -1.4 5,292,873 - +2.0 5,292,887 + -1.2 5,292,887 + -0.9 5,292,888 - +0.1 5,292,888 - +0.2 5,292,888 - -0.8 5,292,937 + -0.3 5,292,998 - -0.0 5,292,998 - -1.6 5,292,998 - -0.2 5,292,998 - -0.7 5,292,998 - -1.0 5,292,998 - -1.7 5,293,057 + -1.3 5,293,057 + +0.4 5,293,162 + +0.0 5,293,162 + -1.8 5,293,163 - -0.4 5,293,164 + -0.1 5,293,164 + -0.7 5,293,165 - -0.1 5,293,165 - +0.6 5,293,165 - +0.6 5,293,219 + +0.3 5,293,219 + -0.6 5,293,219 + +1.0 5,293,249 - +0.6 5,293,249 - -2.0 5,293,352 + -0.4 5,293,353 - +0.2 5,293,353 - +0.6 5,293,363 + -0.4 5,293,376 + -1.9 5,293,377 - -0.4 5,293,380 + -0.4 5,293,380 + -0.0 5,293,380 + -0.0 5,293,381 - -1.4 5,293,385 + -0.0 5,293,385 + +0.6 5,293,386 - +0.1 5,293,386 - -0.2 5,293,386 - -0.0 5,293,386 - -0.2 5,293,391 + +0.6 5,293,420 - -0.8 5,293,421 + +0.3 5,293,462 + +1.1 5,293,463 - +0.6 5,293,463 - -0.0 5,293,640 - AO353_24060 0.26 +0.0 5,293,640 - AO353_24060 0.26 -1.2 5,293,640 - AO353_24060 0.26 -1.7 5,293,640 - AO353_24060 0.26 +0.1 5,293,645 + AO353_24060 0.27 -2.4 5,293,645 + -0.0 5,293,646 - AO353_24060 0.27 -0.0 5,293,646 - AO353_24060 0.27 +0.9 5,293,737 + AO353_24060 0.42 -0.0 5,293,737 + AO353_24060 0.42 -1.4 5,293,737 + AO353_24060 0.42 -2.8 5,293,737 + AO353_24060 0.42 -0.8 5,293,738 - AO353_24060 0.42 -0.4 5,293,739 + AO353_24060 0.42 -0.9 5,293,739 + AO353_24060 0.42 -0.4 5,293,739 + +1.6 5,293,739 + AO353_24060 0.42 +0.2 5,293,739 + AO353_24060 0.42 -0.8 5,293,739 + AO353_24060 0.42 +0.1 5,293,739 + AO353_24060 0.42 -2.3 5,293,739 + AO353_24060 0.42 -0.8 5,293,739 + AO353_24060 0.42 -0.2 5,293,739 + AO353_24060 0.42 -1.0 5,293,739 + AO353_24060 0.42 +0.1 5,293,739 + AO353_24060 0.42 -0.4 5,293,740 - AO353_24060 0.42 +0.6 5,293,740 - AO353_24060 0.42 -1.7 5,293,740 - AO353_24060 0.42 -2.5 5,293,740 - AO353_24060 0.42 -1.0 5,293,740 - AO353_24060 0.42 -2.6 5,293,815 + AO353_24060 0.54 -0.3 5,293,832 - AO353_24060 0.57 -1.8 5,293,872 + AO353_24060 0.63 -2.2 5,293,882 + AO353_24060 0.65 +0.0 5,293,882 + AO353_24060 0.65 -0.0 5,293,882 + AO353_24060 0.65 +0.1 5,293,883 - AO353_24060 0.65 -0.1 5,293,883 - AO353_24060 0.65 -1.8 5,293,883 - AO353_24060 0.65 -0.6 5,293,883 - AO353_24060 0.65 -1.7 5,293,976 + AO353_24060 0.80 +0.6 5,293,976 + AO353_24060 0.80 -0.8 5,293,976 + AO353_24060 0.80 +0.6 5,293,977 - AO353_24060 0.80 -2.6 5,293,985 + AO353_24060 0.81 -0.2 5,293,985 + AO353_24060 0.81 -0.8 5,293,986 - AO353_24060 0.82 -1.0 5,293,986 - AO353_24060 0.82 +0.3 5,294,018 + AO353_24060 0.87 -0.4 5,294,018 + AO353_24060 0.87 -0.8 5,294,018 + AO353_24060 0.87 +0.2 5,294,029 + AO353_24060 0.89 -2.0 5,294,041 + +3.2 5,294,041 + -0.8 5,294,042 - +1.6 5,294,117 + -0.1 5,294,117 + +1.7 5,294,117 + -0.8 5,294,118 - +0.1 5,294,118 - +1.1 5,294,118 - -0.8 5,294,133 - -1.6 5,294,199 + -0.1 5,294,199 + -0.3 5,294,261 + +1.6 5,294,261 + -1.4 5,294,261 + +1.6 5,294,262 - +0.6 5,294,262 - +1.2 5,294,262 - +0.7 5,294,287 - -0.4 5,294,476 - AO353_24065 0.14 -0.7 5,294,540 + AO353_24065 0.19 +0.6 5,294,540 + AO353_24065 0.19 +0.2 5,294,541 - AO353_24065 0.19 +1.6 5,294,541 - AO353_24065 0.19 +1.0 5,294,556 + AO353_24065 0.20 +0.7 5,294,557 - AO353_24065 0.20 +0.6 5,294,608 - AO353_24065 0.24 +0.4 5,294,608 - AO353_24065 0.24 +0.6 5,294,614 + AO353_24065 0.25 -0.5 5,294,614 + AO353_24065 0.25 +0.6 5,294,615 - AO353_24065 0.25 +2.2 5,294,617 + AO353_24065 0.25 -0.7 5,294,617 + AO353_24065 0.25 +0.1 5,294,617 + AO353_24065 0.25 -0.4 5,294,618 - AO353_24065 0.25 +0.4 5,294,618 - AO353_24065 0.25 -0.4 5,294,618 - AO353_24065 0.25 +1.6 5,294,618 - AO353_24065 0.25 +1.6 5,294,618 - AO353_24065 0.25 +0.6 5,294,618 - AO353_24065 0.25 -1.2 5,294,662 + AO353_24065 0.29 +0.6 5,294,662 + +0.6 5,294,663 - AO353_24065 0.29 -0.4 5,294,663 - AO353_24065 0.29 +0.2 5,294,663 - AO353_24065 0.29 +0.4 5,294,666 + AO353_24065 0.29 -0.3 5,294,666 + AO353_24065 0.29 -0.0 5,294,666 + AO353_24065 0.29 -0.6 5,294,667 - AO353_24065 0.29 -0.7 5,294,717 - AO353_24065 0.33 -0.0 5,294,746 - AO353_24065 0.35 +0.6 5,294,746 - AO353_24065 0.35 +1.6 5,294,767 + AO353_24065 0.37 +0.6 5,294,767 + AO353_24065 0.37 +1.3 5,294,767 + AO353_24065 0.37 -0.8 5,294,767 + AO353_24065 0.37 -1.0 5,294,767 + AO353_24065 0.37 -0.4 5,294,767 + -1.8 5,294,768 - AO353_24065 0.37 +0.2 5,294,768 - AO353_24065 0.37 -2.8 5,294,768 - AO353_24065 0.37 +1.2 5,294,808 + AO353_24065 0.40 +0.6 5,294,808 + AO353_24065 0.40 -0.7 5,294,808 + AO353_24065 0.40 -0.6 5,294,968 + AO353_24065 0.53 +0.9 5,294,968 + AO353_24065 0.53 +0.1 5,294,968 + AO353_24065 0.53 -0.2 5,294,968 + AO353_24065 0.53 +0.1 5,294,968 + AO353_24065 0.53 +0.4 5,294,969 - AO353_24065 0.53 -0.4 5,294,969 - AO353_24065 0.53 +0.9 5,294,969 - AO353_24065 0.53 +1.2 5,294,987 - AO353_24065 0.54 -0.4 5,295,027 + AO353_24065 0.57 -0.4 5,295,027 + AO353_24065 0.57 -1.8 5,295,055 + AO353_24065 0.59 -0.8 5,295,055 + AO353_24065 0.59 -1.2 5,295,055 + AO353_24065 0.59 +0.2 5,295,056 - AO353_24065 0.60 +0.4 5,295,056 - AO353_24065 0.60 +0.2
Or see this region's nucleotide sequence