Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24060

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
5,292,581	+		AO353_24055	0.83	-0.2
5,292,582	-		AO353_24055	0.83	-1.0
5,292,725	+		AO353_24055	0.89	-0.4
5,292,725	+		AO353_24055	0.89	-0.4
5,292,725	+		AO353_24055	0.89	-0.2
5,292,725	+		AO353_24055	0.89	+1.2
5,292,726	-		AO353_24055	0.89	+0.2
5,292,726	-		AO353_24055	0.89	-0.7
5,292,726	-		AO353_24055	0.89	-0.1
5,292,726	-		AO353_24055	0.89	+1.6
5,292,726	-		AO353_24055	0.89	+1.6
5,292,726	-		AO353_24055	0.89	+0.0
5,292,729	+		AO353_24055	0.89	+1.2
5,292,729	+		AO353_24055	0.89	-0.1
5,292,729	+		AO353_24055	0.89	-0.4
5,292,729	+		AO353_24055	0.89	+1.2
5,292,730	-		AO353_24055	0.89	+0.1
5,292,730	-		AO353_24055	0.89	+0.4
5,292,730	-		AO353_24055	0.89	+1.2
5,292,740	+		AO353_24055	0.90	+0.3
5,292,776	+				+0.2
5,292,776	+				+0.6
5,292,849	+				+0.6
5,292,849	+				+0.6
5,292,849	+				-1.6
5,292,849	+				-0.0
5,292,850	-				-0.7
5,292,850	-				-1.0
5,292,850	-				-0.5
5,292,850	-				-0.1
5,292,850	-				+0.6
5,292,850	-				-0.8
5,292,873	-				-0.0
5,292,873	-				-1.4
5,292,873	-				+2.0
5,292,887	+				-1.2
5,292,887	+				-0.9
5,292,888	-				+0.1
5,292,888	-				+0.2
5,292,888	-				-0.8
5,292,937	+				-0.3
5,292,998	-				-0.0
5,292,998	-				-1.6
5,292,998	-				-0.2
5,292,998	-				-0.7
5,292,998	-				-1.0
5,292,998	-				-1.7
5,293,057	+				-1.3
5,293,057	+				+0.4
5,293,162	+				+0.0
5,293,162	+				-1.8
5,293,163	-				-0.4
5,293,164	+				-0.1
5,293,164	+				-0.7
5,293,165	-				-0.1
5,293,165	-				+0.6
5,293,165	-				+0.6
5,293,219	+				+0.3
5,293,219	+				-0.6
5,293,219	+				+1.0
5,293,249	-				+0.6
5,293,249	-				-2.0
5,293,352	+				-0.4
5,293,353	-				+0.2
5,293,353	-				+0.6
5,293,363	+				-0.4
5,293,376	+				-1.9
5,293,377	-				-0.4
5,293,380	+				-0.4
5,293,380	+				-0.0
5,293,380	+				-0.0
5,293,381	-				-1.4
5,293,385	+				-0.0
5,293,385	+				+0.6
5,293,386	-				+0.1
5,293,386	-				-0.2
5,293,386	-				-0.0
5,293,386	-				-0.2
5,293,391	+				+0.6
5,293,420	-				-0.8
5,293,421	+				+0.3
5,293,462	+				+1.1
5,293,463	-				+0.6
5,293,463	-				-0.0
5,293,640	-		AO353_24060	0.26	+0.0
5,293,640	-		AO353_24060	0.26	-1.2
5,293,640	-		AO353_24060	0.26	-1.7
5,293,640	-		AO353_24060	0.26	+0.1
5,293,645	+		AO353_24060	0.27	-2.4
5,293,645	+				-0.0
5,293,646	-		AO353_24060	0.27	-0.0
5,293,646	-		AO353_24060	0.27	+0.9
5,293,737	+		AO353_24060	0.42	-0.0
5,293,737	+		AO353_24060	0.42	-1.4
5,293,737	+		AO353_24060	0.42	-2.8
5,293,737	+		AO353_24060	0.42	-0.8
5,293,738	-		AO353_24060	0.42	-0.4
5,293,739	+		AO353_24060	0.42	-0.9
5,293,739	+		AO353_24060	0.42	-0.4
5,293,739	+				+1.6
5,293,739	+		AO353_24060	0.42	+0.2
5,293,739	+		AO353_24060	0.42	-0.8
5,293,739	+		AO353_24060	0.42	+0.1
5,293,739	+		AO353_24060	0.42	-2.3
5,293,739	+		AO353_24060	0.42	-0.8
5,293,739	+		AO353_24060	0.42	-0.2
5,293,739	+		AO353_24060	0.42	-1.0
5,293,739	+		AO353_24060	0.42	+0.1
5,293,739	+		AO353_24060	0.42	-0.4
5,293,740	-		AO353_24060	0.42	+0.6
5,293,740	-		AO353_24060	0.42	-1.7
5,293,740	-		AO353_24060	0.42	-2.5
5,293,740	-		AO353_24060	0.42	-1.0
5,293,740	-		AO353_24060	0.42	-2.6
5,293,815	+		AO353_24060	0.54	-0.3
5,293,832	-		AO353_24060	0.57	-1.8
5,293,872	+		AO353_24060	0.63	-2.2
5,293,882	+		AO353_24060	0.65	+0.0
5,293,882	+		AO353_24060	0.65	-0.0
5,293,882	+		AO353_24060	0.65	+0.1
5,293,883	-		AO353_24060	0.65	-0.1
5,293,883	-		AO353_24060	0.65	-1.8
5,293,883	-		AO353_24060	0.65	-0.6
5,293,883	-		AO353_24060	0.65	-1.7
5,293,976	+		AO353_24060	0.80	+0.6
5,293,976	+		AO353_24060	0.80	-0.8
5,293,976	+		AO353_24060	0.80	+0.6
5,293,977	-		AO353_24060	0.80	-2.6
5,293,985	+		AO353_24060	0.81	-0.2
5,293,985	+		AO353_24060	0.81	-0.8
5,293,986	-		AO353_24060	0.82	-1.0
5,293,986	-		AO353_24060	0.82	+0.3
5,294,018	+		AO353_24060	0.87	-0.4
5,294,018	+		AO353_24060	0.87	-0.8
5,294,018	+		AO353_24060	0.87	+0.2
5,294,029	+		AO353_24060	0.89	-2.0
5,294,041	+				+3.2
5,294,041	+				-0.8
5,294,042	-				+1.6
5,294,117	+				-0.1
5,294,117	+				+1.7
5,294,117	+				-0.8
5,294,118	-				+0.1
5,294,118	-				+1.1
5,294,118	-				-0.8
5,294,133	-				-1.6
5,294,199	+				-0.1
5,294,199	+				-0.3
5,294,261	+				+1.6
5,294,261	+				-1.4
5,294,261	+				+1.6
5,294,262	-				+0.6
5,294,262	-				+1.2
5,294,262	-				+0.7
5,294,287	-				-0.4
5,294,476	-		AO353_24065	0.14	-0.7
5,294,540	+		AO353_24065	0.19	+0.6
5,294,540	+		AO353_24065	0.19	+0.2
5,294,541	-		AO353_24065	0.19	+1.6
5,294,541	-		AO353_24065	0.19	+1.0
5,294,556	+		AO353_24065	0.20	+0.7
5,294,557	-		AO353_24065	0.20	+0.6
5,294,608	-		AO353_24065	0.24	+0.4
5,294,608	-		AO353_24065	0.24	+0.6
5,294,614	+		AO353_24065	0.25	-0.5
5,294,614	+		AO353_24065	0.25	+0.6
5,294,615	-		AO353_24065	0.25	+2.2
5,294,617	+		AO353_24065	0.25	-0.7
5,294,617	+		AO353_24065	0.25	+0.1
5,294,617	+		AO353_24065	0.25	-0.4
5,294,618	-		AO353_24065	0.25	+0.4
5,294,618	-		AO353_24065	0.25	-0.4
5,294,618	-		AO353_24065	0.25	+1.6
5,294,618	-		AO353_24065	0.25	+1.6
5,294,618	-		AO353_24065	0.25	+0.6
5,294,618	-		AO353_24065	0.25	-1.2
5,294,662	+		AO353_24065	0.29	+0.6
5,294,662	+				+0.6
5,294,663	-		AO353_24065	0.29	-0.4
5,294,663	-		AO353_24065	0.29	+0.2
5,294,663	-		AO353_24065	0.29	+0.4
5,294,666	+		AO353_24065	0.29	-0.3
5,294,666	+		AO353_24065	0.29	-0.0
5,294,666	+		AO353_24065	0.29	-0.6
5,294,667	-		AO353_24065	0.29	-0.7
5,294,717	-		AO353_24065	0.33	-0.0
5,294,746	-		AO353_24065	0.35	+0.6
5,294,746	-		AO353_24065	0.35	+1.6
5,294,767	+		AO353_24065	0.37	+0.6
5,294,767	+		AO353_24065	0.37	+1.3
5,294,767	+		AO353_24065	0.37	-0.8
5,294,767	+		AO353_24065	0.37	-1.0
5,294,767	+		AO353_24065	0.37	-0.4
5,294,767	+				-1.8
5,294,768	-		AO353_24065	0.37	+0.2
5,294,768	-		AO353_24065	0.37	-2.8
5,294,768	-		AO353_24065	0.37	+1.2
5,294,808	+		AO353_24065	0.40	+0.6
5,294,808	+		AO353_24065	0.40	-0.7
5,294,808	+		AO353_24065	0.40	-0.6
5,294,968	+		AO353_24065	0.53	+0.9
5,294,968	+		AO353_24065	0.53	+0.1
5,294,968	+		AO353_24065	0.53	-0.2
5,294,968	+		AO353_24065	0.53	+0.1
5,294,968	+		AO353_24065	0.53	+0.4
5,294,969	-		AO353_24065	0.53	-0.4
5,294,969	-		AO353_24065	0.53	+0.9
5,294,969	-		AO353_24065	0.53	+1.2
5,294,987	-		AO353_24065	0.54	-0.4
5,295,027	+		AO353_24065	0.57	-0.4
5,295,027	+		AO353_24065	0.57	-1.8
5,295,055	+		AO353_24065	0.59	-0.8
5,295,055	+		AO353_24065	0.59	-1.2
5,295,055	+		AO353_24065	0.59	+0.2
5,295,056	-		AO353_24065	0.60	+0.4
5,295,056	-		AO353_24065	0.60	+0.2