Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22495

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
4,933,449	+		AO353_22490	0.23	-1.2
4,933,450	-		AO353_22490	0.23	-0.0
4,933,797	-				+0.7
4,933,842	-				-2.0
4,934,036	-				-0.4
4,934,046	+				+0.4
4,934,046	+				-2.7
4,934,046	+				+0.4
4,934,046	+				-1.7
4,934,046	+				-0.9
4,934,047	-				-0.0
4,934,047	-				-0.3
4,934,047	-				-2.0
4,934,249	+				-2.0
4,934,249	+				-1.2
4,934,250	-				-2.7
4,934,250	-				-2.9
4,934,250	-				-0.6
4,934,255	+				+0.2
4,934,255	+				+1.6
4,934,255	+				-0.7
4,934,255	+				-0.4
4,934,256	-				-0.5
4,934,340	-				-0.7
4,934,379	+				-1.4
4,934,380	-				-0.7
4,934,419	+				+0.8
4,934,419	+				-0.2
4,934,419	+				-0.0
4,934,420	-				+0.8
4,934,420	-				-0.2
4,934,428	-				-0.7
4,934,464	+				-0.2
4,934,464	+				+1.3
4,934,464	+				-1.2
4,934,465	-				+0.4
4,934,465	-				-0.4
4,934,465	-				+1.8
4,934,465	-				+1.6
4,934,465	-				+0.8
4,934,465	-				+0.3
4,934,531	+				-1.6
4,934,532	-				-0.0
4,934,532	-				+0.6
4,934,581	-		AO353_22495	0.11	-0.0
4,934,581	-		AO353_22495	0.11	+1.0
4,934,581	-		AO353_22495	0.11	+2.6
4,934,581	-		AO353_22495	0.11	-0.0
4,934,638	+		AO353_22495	0.14	-1.7
4,934,638	+		AO353_22495	0.14	-1.5
4,934,639	-		AO353_22495	0.14	-0.3
4,934,639	-		AO353_22495	0.14	-0.3
4,934,655	+		AO353_22495	0.15	+0.3
4,934,709	+		AO353_22495	0.19	-0.4
4,934,710	-		AO353_22495	0.19	-2.6
4,934,724	+		AO353_22495	0.20	-2.4
4,934,725	-		AO353_22495	0.20	+0.4
4,934,760	+		AO353_22495	0.22	+0.9
4,934,760	+		AO353_22495	0.22	-0.4
4,934,760	+		AO353_22495	0.22	-1.9
4,934,760	+		AO353_22495	0.22	+0.1
4,934,782	+		AO353_22495	0.23	+0.5
4,934,782	+		AO353_22495	0.23	-1.7
4,934,782	+		AO353_22495	0.23	-0.1
4,934,783	-		AO353_22495	0.24	+0.1
4,934,783	-		AO353_22495	0.24	-0.4
4,934,783	-		AO353_22495	0.24	+0.8
4,934,865	+		AO353_22495	0.29	+0.8
4,934,865	+		AO353_22495	0.29	+1.2
4,934,866	-		AO353_22495	0.29	-1.0
4,934,866	-		AO353_22495	0.29	+0.7
4,934,953	+		AO353_22495	0.34	+0.2
4,934,953	+		AO353_22495	0.34	-0.7
4,934,953	+		AO353_22495	0.34	-0.2
4,934,954	-		AO353_22495	0.35	+0.6
4,934,954	-		AO353_22495	0.35	-0.0
4,935,029	+		AO353_22495	0.39	-0.0
4,935,045	+		AO353_22495	0.40	-0.0
4,935,046	-		AO353_22495	0.40	-0.5
4,935,048	+		AO353_22495	0.41	-0.0
4,935,102	+		AO353_22495	0.44	-0.2
4,935,102	+		AO353_22495	0.44	-1.4
4,935,165	+		AO353_22495	0.48	+0.8
4,935,165	+		AO353_22495	0.48	+0.9
4,935,166	-		AO353_22495	0.48	+1.3
4,935,199	-		AO353_22495	0.50	+0.6
4,935,232	-		AO353_22495	0.52	+2.6
4,935,258	+		AO353_22495	0.54	-0.2
4,935,258	+		AO353_22495	0.54	-1.0
4,935,263	+		AO353_22495	0.54	-2.2
4,935,264	-		AO353_22495	0.55	-0.8
4,935,264	-		AO353_22495	0.55	-0.3
4,935,379	+		AO353_22495	0.62	-0.0
4,935,379	+		AO353_22495	0.62	+0.2
4,935,379	+		AO353_22495	0.62	+1.0
4,935,379	+		AO353_22495	0.62	+0.3
4,935,379	+		AO353_22495	0.62	+0.8
4,935,380	-		AO353_22495	0.62	+0.8
4,935,380	-		AO353_22495	0.62	-0.4
4,935,384	+		AO353_22495	0.62	+1.6
4,935,385	-		AO353_22495	0.62	+1.9
4,935,385	-		AO353_22495	0.62	+0.7
4,935,385	-		AO353_22495	0.62	+0.6
4,935,389	-		AO353_22495	0.63	-1.5
4,935,483	+		AO353_22495	0.69	-0.1
4,935,484	-		AO353_22495	0.69	-2.0
4,935,484	-		AO353_22495	0.69	+0.6
4,935,499	+				+0.6
4,935,499	+		AO353_22495	0.70	-1.7
4,935,500	-		AO353_22495	0.70	+0.6
4,935,500	-		AO353_22495	0.70	+0.6
4,935,529	+		AO353_22495	0.72	+1.0
4,935,613	+		AO353_22495	0.77	+0.3
4,935,613	+		AO353_22495	0.77	-0.2
4,935,631	-		AO353_22495	0.78	+1.3
4,935,631	-		AO353_22495	0.78	-1.2
4,935,631	-		AO353_22495	0.78	-0.2
4,935,631	-		AO353_22495	0.78	-0.7
4,935,664	-		AO353_22495	0.80	+0.3
4,935,729	+		AO353_22495	0.85	-0.4
4,935,730	-		AO353_22495	0.85	+1.0
4,935,731	+		AO353_22495	0.85	+0.6
4,935,731	+		AO353_22495	0.85	-2.0
4,935,731	+		AO353_22495	0.85	-0.5
4,935,732	-		AO353_22495	0.85	+0.5
4,935,736	-		AO353_22495	0.85	-1.0
4,935,854	+				-0.6
4,935,855	-				+0.2
4,935,879	+				+0.4
4,935,880	-				-2.0
4,935,880	-				-1.2
4,935,998	+				+0.2
4,935,999	-				-0.5
4,936,007	+				-0.4
4,936,205	+				-1.9
4,936,210	+				+0.1
4,936,210	+				+0.6
4,936,210	+				-1.4
4,936,210	+				-0.4
4,936,211	-				+2.0
4,936,247	-				-0.1
4,936,247	-				-0.0
4,936,291	+		AO353_22500	0.27	+0.4
4,936,373	+		AO353_22500	0.69	-2.6
4,936,373	+		AO353_22500	0.69	-2.6
4,936,431	-				-1.1
4,936,563	-				-0.2
4,936,573	+				+0.7
4,936,574	-				-0.4
4,936,580	+				+1.0
4,936,656	-				+0.3
4,936,684	+				-0.4
4,936,685	-				-0.4
4,936,685	-				-0.0
4,936,714	+				+0.6
4,936,714	+				+0.6
4,936,715	-				-0.0
4,936,715	-				-2.6
4,936,715	-				-1.2
4,936,715	-				+2.2
4,936,718	+				-0.2
4,936,718	+				-1.2
4,936,718	+				+1.6
4,936,718	+				-0.2
4,936,718	+				-0.2
4,936,718	+				+0.6
4,936,718	+				-0.4
4,936,719	-		AO353_22505	0.10	+1.7
4,936,719	-		AO353_22505	0.10	-0.3
4,936,719	-		AO353_22505	0.10	-0.0
4,936,719	-		AO353_22505	0.10	+0.3
4,936,719	-		AO353_22505	0.10	-0.4
4,936,719	-		AO353_22505	0.10	-0.4
4,936,719	-		AO353_22505	0.10	+1.0
4,936,719	-		AO353_22505	0.10	-0.0
4,936,719	-		AO353_22505	0.10	+1.6
4,936,725	-		AO353_22505	0.12	+0.8
4,936,768	+		AO353_22505	0.24	-1.2
4,936,768	+		AO353_22505	0.24	+0.6
4,936,768	+		AO353_22505	0.24	-0.3
4,936,768	+		AO353_22505	0.24	+0.6
4,936,768	+		AO353_22505	0.24	+0.4
4,936,768	+		AO353_22505	0.24	+0.6
4,936,769	-		AO353_22505	0.24	-2.2
4,936,769	-		AO353_22505	0.24	-1.0
4,936,776	+		AO353_22505	0.26	+0.2
4,936,776	+		AO353_22505	0.26	+0.6
4,936,777	-		AO353_22505	0.26	-0.6
4,936,797	+		AO353_22505	0.32	-0.4
4,936,797	+		AO353_22505	0.32	+0.6
4,936,797	+		AO353_22505	0.32	-2.0
4,936,797	+		AO353_22505	0.32	-2.0
4,936,797	+		AO353_22505	0.32	-1.2
4,936,798	-		AO353_22505	0.32	-1.7
4,936,798	-		AO353_22505	0.32	-0.0
4,936,798	-		AO353_22505	0.32	-0.5
4,936,800	+		AO353_22505	0.33	+0.3
4,936,801	-		AO353_22505	0.33	+0.3
4,936,801	-		AO353_22505	0.33	+0.6
4,936,801	-		AO353_22505	0.33	-1.7
4,936,830	+		AO353_22505	0.41	-1.0
4,936,935	+		AO353_22505	0.71	-3.1
4,936,935	+		AO353_22505	0.71	+0.2