Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21920

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
4,804,448	-		AO353_21915	0.43	+2.2
4,804,448	-		AO353_21915	0.43	-0.4
4,804,503	+		AO353_21915	0.47	+0.4
4,804,503	+		AO353_21915	0.47	+0.3
4,804,503	+		AO353_21915	0.47	+0.7
4,804,503	+		AO353_21915	0.47	-2.4
4,804,504	-		AO353_21915	0.47	+1.6
4,804,504	-		AO353_21915	0.47	-0.7
4,804,504	-		AO353_21915	0.47	-1.1
4,804,504	-		AO353_21915	0.47	+0.6
4,804,504	-		AO353_21915	0.47	+0.2
4,804,504	-		AO353_21915	0.47	-1.4
4,804,508	-		AO353_21915	0.47	-1.1
4,804,508	-		AO353_21915	0.47	-0.8
4,804,508	-		AO353_21915	0.47	+0.3
4,804,508	-		AO353_21915	0.47	-0.4
4,804,591	+		AO353_21915	0.53	-0.4
4,804,592	-		AO353_21915	0.53	-0.6
4,804,597	+		AO353_21915	0.53	+0.0
4,804,597	+		AO353_21915	0.53	-1.3
4,804,597	+		AO353_21915	0.53	+1.6
4,804,597	+				-1.0
4,804,597	+		AO353_21915	0.53	-0.3
4,804,597	+		AO353_21915	0.53	+0.0
4,804,598	-		AO353_21915	0.53	-0.5
4,804,598	-		AO353_21915	0.53	+3.8
4,804,598	-		AO353_21915	0.53	+1.2
4,804,598	-		AO353_21915	0.53	-0.5
4,804,598	-		AO353_21915	0.53	+0.9
4,804,598	-		AO353_21915	0.53	+2.9
4,804,717	+		AO353_21915	0.62	+0.6
4,804,718	-		AO353_21915	0.62	+0.9
4,804,718	-		AO353_21915	0.62	-0.3
4,804,718	-		AO353_21915	0.62	-1.4
4,804,723	+		AO353_21915	0.62	-1.7
4,804,723	+		AO353_21915	0.62	-0.4
4,804,723	+		AO353_21915	0.62	-0.6
4,804,723	+		AO353_21915	0.62	+0.0
4,804,723	+		AO353_21915	0.62	-0.9
4,804,723	+		AO353_21915	0.62	+0.7
4,804,723	+		AO353_21915	0.62	-0.1
4,804,724	-		AO353_21915	0.62	-2.2
4,804,724	-		AO353_21915	0.62	+0.1
4,804,724	-		AO353_21915	0.62	+1.3
4,804,724	-		AO353_21915	0.62	+1.2
4,804,724	-		AO353_21915	0.62	+1.1
4,804,811	-		AO353_21915	0.69	+0.6
4,804,875	+		AO353_21915	0.73	+0.1
4,804,879	+		AO353_21915	0.74	+0.0
4,804,879	+		AO353_21915	0.74	-0.2
4,804,879	+		AO353_21915	0.74	+0.2
4,804,879	+		AO353_21915	0.74	+0.6
4,804,880	-		AO353_21915	0.74	-0.3
4,804,880	-		AO353_21915	0.74	-0.4
4,804,880	-		AO353_21915	0.74	+0.7
4,804,880	-		AO353_21915	0.74	-0.4
4,804,880	-		AO353_21915	0.74	+0.2
4,804,880	-		AO353_21915	0.74	+0.3
4,804,880	-		AO353_21915	0.74	+0.8
4,804,910	-		AO353_21915	0.76	+0.0
4,804,910	-		AO353_21915	0.76	+0.9
4,804,912	+		AO353_21915	0.76	+0.2
4,804,954	+		AO353_21915	0.79	+1.2
4,805,068	+		AO353_21915	0.87	-1.0
4,805,200	+				-1.0
4,805,201	-				-0.7
4,805,201	-				+0.6
4,805,201	-				+2.6
4,805,321	+				-1.4
4,805,321	+				+1.9
4,805,321	+				+0.6
4,805,321	+				-0.6
4,805,322	-				+0.3
4,805,322	-				-0.2
4,805,363	+				+0.1
4,805,384	+				-0.0
4,805,384	+				-0.1
4,805,385	-				+0.2
4,805,385	-				-0.4
4,805,385	-				+1.2
4,805,429	+				+0.6
4,805,429	+				-1.0
4,805,429	+				-0.3
4,805,430	-				+1.2
4,805,430	-				-0.6
4,805,430	-				-1.4
4,805,430	-				+2.2
4,805,520	+				-0.5
4,805,520	+				-2.7
4,805,520	+				+0.9
4,805,521	-				-1.0
4,805,535	-		AO353_21920	0.10	+0.2
4,805,814	+		AO353_21920	0.29	-0.2
4,805,826	-		AO353_21920	0.30	-1.4
4,805,946	-		AO353_21920	0.38	+0.1
4,806,092	+		AO353_21920	0.47	-1.7
4,806,092	+		AO353_21920	0.47	+0.0
4,806,092	+		AO353_21920	0.47	-0.1
4,806,093	-		AO353_21920	0.48	-0.4
4,806,093	-		AO353_21920	0.48	-1.0
4,806,093	-		AO353_21920	0.48	-0.3
4,806,197	+		AO353_21920	0.54	+0.3
4,806,197	+		AO353_21920	0.54	-1.4
4,806,197	+		AO353_21920	0.54	+0.3
4,806,198	-		AO353_21920	0.55	+0.6
4,806,198	-		AO353_21920	0.55	-0.4
4,806,198	-		AO353_21920	0.55	+0.6
4,806,198	-		AO353_21920	0.55	-0.4
4,806,198	-		AO353_21920	0.55	-2.4
4,806,198	-		AO353_21920	0.55	-0.7
4,806,198	-		AO353_21920	0.55	-1.7
4,806,198	-		AO353_21920	0.55	+0.6
4,806,299	+		AO353_21920	0.61	-1.4
4,806,299	+		AO353_21920	0.61	-1.5
4,806,299	+		AO353_21920	0.61	-0.4
4,806,300	-		AO353_21920	0.61	+0.3
4,806,332	+		AO353_21920	0.64	-0.6
4,806,333	-		AO353_21920	0.64	-2.2
4,806,516	+		AO353_21920	0.76	-1.7
4,806,555	+		AO353_21920	0.78	+0.6
4,806,593	+		AO353_21920	0.81	+0.6
4,806,593	+		AO353_21920	0.81	-0.5
4,806,594	-		AO353_21920	0.81	+0.0
4,806,877	-				+0.6
4,806,877	-				+0.1
4,806,948	-				+0.3
4,807,068	-		AO353_21925	0.23	+0.0
4,807,159	+		AO353_21925	0.34	+0.3
4,807,159	+		AO353_21925	0.34	+0.6
4,807,159	+		AO353_21925	0.34	+0.8
4,807,159	+		AO353_21925	0.34	-0.3
4,807,160	-		AO353_21925	0.34	-0.4
4,807,160	-		AO353_21925	0.34	-1.6
4,807,160	-		AO353_21925	0.34	-0.7
4,807,160	-				-1.0
4,807,291	+		AO353_21925	0.50	+2.3
4,807,291	+		AO353_21925	0.50	-0.3
4,807,299	-				-0.4
4,807,316	+		AO353_21925	0.53	+0.0
4,807,316	+		AO353_21925	0.53	-1.0
4,807,346	+		AO353_21925	0.56	+1.6
4,807,346	+		AO353_21925	0.56	+1.5
4,807,346	+		AO353_21925	0.56	-1.2
4,807,346	+		AO353_21925	0.56	+0.1
4,807,346	+		AO353_21925	0.56	-0.4
4,807,346	+		AO353_21925	0.56	-1.4
4,807,346	+				+0.0
4,807,346	+		AO353_21925	0.56	-0.6
4,807,346	+		AO353_21925	0.56	-1.0
4,807,347	-		AO353_21925	0.56	+0.6
4,807,347	-		AO353_21925	0.56	+0.7
4,807,347	-		AO353_21925	0.56	+1.3
4,807,360	+		AO353_21925	0.58	+0.6
4,807,360	+		AO353_21925	0.58	+0.7
4,807,361	-		AO353_21925	0.58	+0.9
4,807,361	-		AO353_21925	0.58	+0.6
4,807,361	-		AO353_21925	0.58	+1.9
4,807,390	-		AO353_21925	0.62	+0.6
4,807,452	+		AO353_21925	0.69	+0.0
4,807,452	+		AO353_21925	0.69	+0.6
4,807,452	+		AO353_21925	0.69	+0.6
4,807,452	+		AO353_21925	0.69	-0.3
4,807,453	-		AO353_21925	0.69	+0.6
4,807,453	-		AO353_21925	0.69	-2.0
4,807,453	-		AO353_21925	0.69	+1.0
4,807,507	+		AO353_21925	0.75	+0.0
4,807,508	-		AO353_21925	0.76	-1.6
4,807,508	-		AO353_21925	0.76	-1.3
4,807,508	-		AO353_21925	0.76	-0.4
4,807,567	+		AO353_21925	0.83	+2.9
4,807,568	-		AO353_21925	0.83	-1.4
4,807,698	-				-0.9